Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g01610.t01
CDS Infomation

cds chromosome:12X:10:866481:871411:-1 gene:VIT_10s0116g01610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGACCTCTGTTTCTTCACTATCTTCATTCTGGGTCTTCTTCTTCCTGGAGTTCAT
GGAGAAGACCCATACAGGTTCTACACTTGGAAAGTCACCTACGGAGATATCTATCCTCTG
GGTGTCAAACAACAGGGCATCCTCATAAATGGGCAGTTTCCGGGGCCTCAGATCGATGCT
GTTACCAACGATAACTTGATTATCAGTGTATACAACTACTTAAGAGAGCCTTTCCTCATT
TCTTGGAGTGGATTACAGCAGAGGAGGAACTCATGGCAAGATGGAATGTATGGAACCAAC
TGTCCGATTCCTCCGGGAAGGAACATGACCTATGCTCTTCAAGTGAAGGACCAGATCGGT
AGCTTTTTCTACTTCCCCTCCCTTGCATTCCACAAGGCTGCTGGGGGATTTGGTGGCATC
AGAATCTTGAGCCGTCCTCGCATTCCTGTGCCTTTTCCTGCTCCTTCTGGGGATTTCACC
GTGCTGGCTGGGGACTGGTTCAAGAGAGATCACGCTGTGTTGAAAGGAATCTTGGACAGA
GGCCACAATCTTCCTTTCCCGGATGGGCTTCTCATCAATGGCCGTGGGTGGAATGGATAC
ACATTCCAAGTTGATCAAGGGAAGACGTACAGGTTTAGGATTTCGAACGTGGGGCTTACA
ACGTCGATAAACTTTAGAATTCAGGGGCACAAGATGAAGTTGGTGGAGGTAGAAGGATCG
CATACACTCCAGAACACCTACTCTGCCCTCGACATCCATCTGGGGCAATCCTATTCTGTC
TTGGTCACAGCCGATCAGCCCCCACAGGACTACTACGTAGTCGTTTCCTCGCGCTTCACT
AGTCCTGTGCTAACCACAACAGCCATTCTTCACTACAGTTGGTCGACCAAGGGCCTCTCT
GGTCCTCCCCCTGGTGGACCGACCATTCAGGTTGATTGGTCCCTCAACCAGGCTAGGTCT
ATCCGTTGGAACCTGACAGCAAGCGGGCCTAGGCCGAACCCCCAAGGCTCCTACCACTAT
GGATTGATCACAACCAGCCGAACAATCACGCTTGCAAACTCTGCTCCTATGATTAATGGC
AAGCAGAGGTATGCTGTCAACAGCGTCTCGTTTGTTCCTGCAAGTACCCCGCTGAAACTC
GCGGACTACTTCAAGATCCCTGGGGTCTTTAACCTTGGGAGCATTCCCAGCTACCCCACC
TGGGGAAATGGTTACCTCCAGACCTCTGTAATGCATGCTGACTTCAGATCCTATGTTGAG
ATTGTCTTCCAAAACTGGGAGGACATTGTCCAGTCATGGCACATTGATGGCTATTCCTTC
TTTGTCATGGGAATGGATGGAGGGCAGTGGACGCCTGCAAGTAGAGCAAGCTACAATCTG
AGAGACACGGTTGCTCGTTGCACTGTTCAGGTTTATCCCAAGGCATGGACTGCAATCTAC
ATGGCTCTGGACAATGTAGGTATGTGGAATGTAAGGTCTGAAAACTGGGCTAGGCAGTAC
CTGGGACAGCAGTTCTATCTTAGGGTTTTCTCCCCAGCAAATTCATGGAGAGATGAATTA
CCAATCCCAAAGAATGCTCTTCTCTGTGGCCGGGCATCAGGCCGCCACACCCGACCTCTT
TGA

Peptide Sequence

PEP ID

VIT_10s0116g01610.t01
PEP Infomation

pep chromosome:12X:10:866481:871411:-1 gene:VIT_10s0116g01610 transcript:VIT_10s0116g01610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRDLCFFTIFILGLLLPGVHGEDPYRFYTWKVTYGDIYPLGVKQQGILINGQFPGPQIDA
VTNDNLIISVYNYLREPFLISWSGLQQRRNSWQDGMYGTNCPIPPGRNMTYALQVKDQIG
SFFYFPSLAFHKAAGGFGGIRILSRPRIPVPFPAPSGDFTVLAGDWFKRDHAVLKGILDR
GHNLPFPDGLLINGRGWNGYTFQVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEVEGS
HTLQNTYSALDIHLGQSYSVLVTADQPPQDYYVVVSSRFTSPVLTTTAILHYSWSTKGLS
GPPPGGPTIQVDWSLNQARSIRWNLTASGPRPNPQGSYHYGLITTSRTITLANSAPMING
KQRYAVNSVSFVPASTPLKLADYFKIPGVFNLGSIPSYPTWGNGYLQTSVMHADFRSYVE
IVFQNWEDIVQSWHIDGYSFFVMGMDGGQWTPASRASYNLRDTVARCTVQVYPKAWTAIY
MALDNVGMWNVRSENWARQYLGQQFYLRVFSPANSWRDELPIPKNALLCGRASGRHTRPL

Transcript Sequence

Transcript ID

VIT_10s0116g01610.t01
Transcript Infomation

cdna chromosome:12X:10:866481:871411:-1 gene:VIT_10s0116g01610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGACATCTAGCTCACAAGCCAGCTCTCTCTGCTCCCACAAGAGAACAAAATAGAGAGAAA
AGAGGGAGCCCAACTGGGTTTTCTACTTCTCTCTTCCACCCAAAACCCAGTGGAGATTTG
ATAAGAGAAGAGAAAGAAGATAATGAGAGACCTCTGTTTCTTCACTATCTTCATTCTGGG
TCTTCTTCTTCCTGGAGTTCATGGAGAAGACCCATACAGGTTCTACACTTGGAAAGTCAC
CTACGGAGATATCTATCCTCTGGGTGTCAAACAACAGGGCATCCTCATAAATGGGCAGTT
TCCGGGGCCTCAGATCGATGCTGTTACCAACGATAACTTGATTATCAGTGTATACAACTA
CTTAAGAGAGCCTTTCCTCATTTCTTGGAGTGGATTACAGCAGAGGAGGAACTCATGGCA
AGATGGAATGTATGGAACCAACTGTCCGATTCCTCCGGGAAGGAACATGACCTATGCTCT
TCAAGTGAAGGACCAGATCGGTAGCTTTTTCTACTTCCCCTCCCTTGCATTCCACAAGGC
TGCTGGGGGATTTGGTGGCATCAGAATCTTGAGCCGTCCTCGCATTCCTGTGCCTTTTCC
TGCTCCTTCTGGGGATTTCACCGTGCTGGCTGGGGACTGGTTCAAGAGAGATCACGCTGT
GTTGAAAGGAATCTTGGACAGAGGCCACAATCTTCCTTTCCCGGATGGGCTTCTCATCAA
TGGCCGTGGGTGGAATGGATACACATTCCAAGTTGATCAAGGGAAGACGTACAGGTTTAG
GATTTCGAACGTGGGGCTTACAACGTCGATAAACTTTAGAATTCAGGGGCACAAGATGAA
GTTGGTGGAGGTAGAAGGATCGCATACACTCCAGAACACCTACTCTGCCCTCGACATCCA
TCTGGGGCAATCCTATTCTGTCTTGGTCACAGCCGATCAGCCCCCACAGGACTACTACGT
AGTCGTTTCCTCGCGCTTCACTAGTCCTGTGCTAACCACAACAGCCATTCTTCACTACAG
TTGGTCGACCAAGGGCCTCTCTGGTCCTCCCCCTGGTGGACCGACCATTCAGGTTGATTG
GTCCCTCAACCAGGCTAGGTCTATCCGTTGGAACCTGACAGCAAGCGGGCCTAGGCCGAA
CCCCCAAGGCTCCTACCACTATGGATTGATCACAACCAGCCGAACAATCACGCTTGCAAA
CTCTGCTCCTATGATTAATGGCAAGCAGAGGTATGCTGTCAACAGCGTCTCGTTTGTTCC
TGCAAGTACCCCGCTGAAACTCGCGGACTACTTCAAGATCCCTGGGGTCTTTAACCTTGG
GAGCATTCCCAGCTACCCCACCTGGGGAAATGGTTACCTCCAGACCTCTGTAATGCATGC
TGACTTCAGATCCTATGTTGAGATTGTCTTCCAAAACTGGGAGGACATTGTCCAGTCATG
GCACATTGATGGCTATTCCTTCTTTGTCATGGGAATGGATGGAGGGCAGTGGACGCCTGC
AAGTAGAGCAAGCTACAATCTGAGAGACACGGTTGCTCGTTGCACTGTTCAGGTTTATCC
CAAGGCATGGACTGCAATCTACATGGCTCTGGACAATGTAGGTATGTGGAATGTAAGGTC
TGAAAACTGGGCTAGGCAGTACCTGGGACAGCAGTTCTATCTTAGGGTTTTCTCCCCAGC
AAATTCATGGAGAGATGAATTACCAATCCCAAAGAATGCTCTTCTCTGTGGCCGGGCATC
AGGCCGCCACACCCGACCTCTTTGAAACCAGCAGACCCCGGATTGTCACAAGAGGGTGAC