Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_10s0116g01160.t01
CDS Infomation	cds chromosome:12X:10:603711:605197:1 gene:VIT_10s0116g01160 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6H7G9]
Sequence	ATGGCCTACACAGCACTTTTCCTAGTGCTTTCCTGCACTCTAGCCTACTACGCTTCAACT TTACAGGCTTACTCATCACTAGACTACACCCCTCAAACGTTCACAAGCTATATGCCTAGC AGTTCTAAGTCGTCCACTAAAAAAGTCATGAACCCAATAGACTCTTGCTGGCGCAGAAAG GCCAATTGGGCCTCTAATCGCCGCGCCTTGGCTGACTGCGCTGTAGGCTTTGGTAAAGGC GCAATGGGAGGAAAGTATGGCGCCATGTATGTAGTCACTACCCCTTCTGATGATCCGGTG AATCCCAAACCAGGCACACTTCGTTATGGTGTAATTCAGACTAAGCCGCTTTGGATCGTT TTTGCTAAGGACATGGTGATTACGCTGAAAAATGAGTTGATTATGAATAGTTTCAAGACT ATTGATGGGAGGGGAGCGAAGGTGGAGATTGCTTACGGGCCGTGCATCACTATACAAGGT GTGAGCCATGTTATTATACATGGGATTAGTATTCATGACTGTAAGCCTGGGAAGTCTGGC CTTGTTAGGAGTACTACGATGCACGTTGGTCATCGCCTCGGCTCTGATGGCGATGCGATC AGTATATTCACTTCTTCGCATGTTTGGATTGACCATTGCTATCTCGCTAGCTGCACCGAT GGCCTTATCGATGTTATTCATGCGTCTACTGCTATCACCATTTCTAACAACTACTTCTCT CACCATGATAAAGTAATGCTGTTTGGGCACGATGATCACTTCACTGCAGATAAAGTCATG AGTGTTACAGTCGCCTTCAACCATTTTGGCACTGGTCTAGTTCAAAGGATGCCAAGGGTT AGATTTGGCTATGCCCACCTTGCCAACAACAAGTATGATGAATGGGAGATGTATGCCATT GGTGGGAGTGCTAATCCAACCATCTTAAGCGAAGGGAACCACTTTACTGCTCCTGACAAT GCCAACACCAAAGAGGTTACCAAGAGAGAGGTTAAAAGTGGTTGGAAGAATTGGAAATGG AGGTCCTCTAAGGATAAATTTGTGAATGGTGCATACTTTGTTCATCTGGATGGGGAAGCT GTGCCCCGCTTTACTCTCGATCCCAAGCATTTTCTGTTGCTGATGGTTCAATGGTTCCTG CTTTAA

Peptide Sequence

PEP ID	VIT_10s0116g01160.t01
PEP Infomation	pep chromosome:12X:10:603711:605197:1 gene:VIT_10s0116g01160 transcript:VIT_10s0116g01160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6H7G9]
Sequence	MAYTALFLVLSCTLAYYASTLQAYSSLDYTPQTFTSYMPSSSKSSTKKVMNPIDSCWRRK ANWASNRRALADCAVGFGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRYGVIQTKPLWIV FAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCITIQGVSHVIIHGISIHDCKPGKSG LVRSTTMHVGHRLGSDGDAISIFTSSHVWIDHCYLASCTDGLIDVIHASTAITISNNYFS HHDKVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPRVRFGYAHLANNKYDEWEMYAI GGSANPTILSEGNHFTAPDNANTKEVTKREVKSGWKNWKWRSSKDKFVNGAYFVHLDGEA VPRFTLDPKHFLLLMVQWFLL

Transcript Sequence

Transcript ID	VIT_10s0116g01160.t01
Transcript Infomation	cdna chromosome:12X:10:603711:605197:1 gene:VIT_10s0116g01160 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6H7G9]
Sequence	CCATGGCCTACACAGCACTTTTCCTAGTGCTTTCCTGCACTCTAGCCTACTACGCTTCAA CTTTACAGGCTTACTCATCACTAGACTACACCCCTCAAACGTTCACAAGCTATATGCCTA GCAGTTCTAAGTCGTCCACTAAAAAAGTCATGAACCCAATAGACTCTTGCTGGCGCAGAA AGGCCAATTGGGCCTCTAATCGCCGCGCCTTGGCTGACTGCGCTGTAGGCTTTGGTAAAG GCGCAATGGGAGGAAAGTATGGCGCCATGTATGTAGTCACTACCCCTTCTGATGATCCGG TGAATCCCAAACCAGGCACACTTCGTTATGGTGTAATTCAGACTAAGCCGCTTTGGATCG TTTTTGCTAAGGACATGGTGATTACGCTGAAAAATGAGTTGATTATGAATAGTTTCAAGA CTATTGATGGGAGGGGAGCGAAGGTGGAGATTGCTTACGGGCCGTGCATCACTATACAAG GTGTGAGCCATGTTATTATACATGGGATTAGTATTCATGACTGTAAGCCTGGGAAGTCTG GCCTTGTTAGGAGTACTACGATGCACGTTGGTCATCGCCTCGGCTCTGATGGCGATGCGA TCAGTATATTCACTTCTTCGCATGTTTGGATTGACCATTGCTATCTCGCTAGCTGCACCG ATGGCCTTATCGATGTTATTCATGCGTCTACTGCTATCACCATTTCTAACAACTACTTCT CTCACCATGATAAAGTAATGCTGTTTGGGCACGATGATCACTTCACTGCAGATAAAGTCA TGAGTGTTACAGTCGCCTTCAACCATTTTGGCACTGGTCTAGTTCAAAGGATGCCAAGGG TTAGATTTGGCTATGCCCACCTTGCCAACAACAAGTATGATGAATGGGAGATGTATGCCA TTGGTGGGAGTGCTAATCCAACCATCTTAAGCGAAGGGAACCACTTTACTGCTCCTGACA ATGCCAACACCAAAGAGGTTACCAAGAGAGAGGTTAAAAGTGGTTGGAAGAATTGGAAAT GGAGGTCCTCTAAGGATAAATTTGTGAATGGTGCATACTTTGTTCATCTGGATGGGGAAG CTGTGCCCCGCTTTACTCTCGATCCCAAGCATTTTCTGTTGCTGATGGTTCAATGGTTCC TGCTTTAACATCTGATGCGGGTCCTTTGGGTTGTTCTGCTGGCAAACCATGTTGAT