Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00960.t01
CDS Infomation

cds chromosome:12X:10:463607:466824:1 gene:VIT_10s0116g00960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAAGCGATAGAAGAATTGTTGTTCCCTGCACCAAATGTAAATCAAAATTATATTGC
ATACAGTGCATCAAGCAATGGTATCCCAACATGTCAGAAGTAGAAATTGCAGAGCTTTGC
CCGTTTTGCCGTAGAAATTGCAACTGTAACCTGTGCCTGCATTCCAGTGGGATCGTTAAG
ACGGTGAAGACTGATATCAGTGATGGTGAAAAGGTTCAGCATCTTCTGTATTTGATCAAG
ACACTTTTTCCTTATCTTAAACAAATTTATGAAGAGCAAACAGAGGAGATAGAGGTTGAG
GCTAATATTCAAGGGATACCATCTTCTGGAATTACAATACCAGTGTCTTCATGCCCCAGT
GATGAGCGTGTCTATTGCAACCATTGTGCAACTTCAATTGTTGATCTCCACCGAAGCTGC
CCAAAATGTTGTTATGAGCTCTGCCTCAGCTGTTGCAAGGAGATTCGGAAGGGAAACCTT
TTAAGGTGCACTGCAGTGGATTTCCAGTATGTGGAGAGAGGATTTGATTATATGCATGGC
GAAGATCCTTTACCAGAATCCTATTATATGGGAACGGTTGGGAATGATGTTGAGCCATTG
ACTGAATGGAATGCCAATAAGGATGGAAGCATTATCTGTGCCCCAAAAGAAATGGGTGGA
TGTGGTGGTAGTTTATTGCAGCTCAAGCATATCCTCCCGGAAGACAGGATTTTAGATTTG
AAAGAGAGAGCTGAACAAGTGATGATGAAATTTGGGACTGAACAAGCTAGGAACTGTTCG
ACAAATGGCTCTGAGATGGTGAAGAGAGCATCTTCTAGAGAAGGCACTGATGACAATTAC
TTGTACTGTCCAGCTTCACATGACATTTTAAAGGAGGAGGAATTTTTGAACTTCCAGAGG
CATTGGGCTAAAGGCGAACCAGTGATTGTTTGTAATGTTCTAGAGCAGACAACTGGTTTA
AGCTGGGAGCCCATGGTCATGTGGCGGGCACTTTGCGAAAACATGGATTCCAAGATGAGT
TCGAAGATGTCAGAAGTGAAGGCCGAGGAATGCCTATCTAGCTGCCAGGTAGATATCAGT
ACACGCCAATTTTTCAAAGGCTACACAGAAGGAAGATCATATGATAATTTATGGCCTGAA
ATGCTGAAGCTAAAGGACTGGCCCCCATCTGATAAATTTGAGAATCTTTTGCCTCGCCAC
TGTGATGAGTTCATCAGCGCATTGCCATTTCAGGAATATACAGACCCTAGGGCTGGCTTC
CTTAACCTTGCTGTAAAGTTGCCAAATACCATTCTCAAACCAGACTTGGGTCCAAAAACG
TACATTGCTTATGGGATTGCTGAGGAGCTTGGCAGGGGGGATTCAGTAACTAAGCTTCAC
TGTGATATGTCAGATGCAGTGAATATTTTGACACACACTGCAGAGGTAGTTCTAGATGAC
AATCAACGCCTGGCAGTCAAAAGGTTGAAGAAGAAACACCAAGCCCAAGATAAGAGGGAA
AATCTTGTTCCACCATGTCAGCAAGAGGAAGATTTGCCTATCTCTAGGATTACAGTAACA
GAAAATGAGGATGAGGAAGAAGGGCCCTACTTTCCTGGTTTCCTTCCACCAGGGAAGACA
CAGAAAACCGGCAGTGCTCTGTGGGATATTTTCAGGAGGGAAGATGTGCCCAAACTACAG
GACTACCTTAGAAAGCACTCCAAAGAATTTAGGCATGTGTTTTGTTCTCCTGTAAACAGG
GTTGTTCATCCGATTCACGATCAATCATTCTATTTGACTTTGGAGCACAAGAAGAAACTC
AAGGAGGAATATGGAATTGAACCTTGGACATTTGAACAAAGAATTGGTGAGGCAGTATTC
ATTCCTGCAGGATGCCCACATCAAGTCAGAAATCTCAAGTCATGCACAAAAGTTGCTGTG
GACTTCGTCTCTCCAGAAAATATCCATGAATGCATCAGGCTGACAGAGGAGTTCCGCCAA
CTTCCTAAGAACCACAGGGTCAGAGAAGACAAGCTCGAGATAAAGAAAATGATTGTATAT
GCAGTGGCTCAATCTCTTAAAGATTTCTACTTGCTGGCATCAGGCTGA

Peptide Sequence

PEP ID

VIT_10s0116g00960.t01
PEP Infomation

pep chromosome:12X:10:463607:466824:1 gene:VIT_10s0116g00960 transcript:VIT_10s0116g00960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRSDRRIVVPCTKCKSKLYCIQCIKQWYPNMSEVEIAELCPFCRRNCNCNLCLHSSGIVK
TVKTDISDGEKVQHLLYLIKTLFPYLKQIYEEQTEEIEVEANIQGIPSSGITIPVSSCPS
DERVYCNHCATSIVDLHRSCPKCCYELCLSCCKEIRKGNLLRCTAVDFQYVERGFDYMHG
EDPLPESYYMGTVGNDVEPLTEWNANKDGSIICAPKEMGGCGGSLLQLKHILPEDRILDL
KERAEQVMMKFGTEQARNCSTNGSEMVKRASSREGTDDNYLYCPASHDILKEEEFLNFQR
HWAKGEPVIVCNVLEQTTGLSWEPMVMWRALCENMDSKMSSKMSEVKAEECLSSCQVDIS
TRQFFKGYTEGRSYDNLWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYTDPRAGF
LNLAVKLPNTILKPDLGPKTYIAYGIAEELGRGDSVTKLHCDMSDAVNILTHTAEVVLDD
NQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPISRITVTENEDEEEGPYFPGFLPPGKT
QKTGSALWDIFRREDVPKLQDYLRKHSKEFRHVFCSPVNRVVHPIHDQSFYLTLEHKKKL
KEEYGIEPWTFEQRIGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECIRLTEEFRQ
LPKNHRVREDKLEIKKMIVYAVAQSLKDFYLLASG

Transcript Sequence

Transcript ID

VIT_10s0116g00960.t01
Transcript Infomation

cdna chromosome:12X:10:463607:466824:1 gene:VIT_10s0116g00960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCATCAGGGCAATGGAGGAGATCGTTTGAAGTGCCATCAGTGTATGAGAAGCGATAGAAG
AATTGTTGTTCCCTGCACCAAATGTAAATCAAAATTATATTGCATACAGTGCATCAAGCA
ATGGTATCCCAACATGTCAGAAGTAGAAATTGCAGAGCTTTGCCCGTTTTGCCGTAGAAA
TTGCAACTGTAACCTGTGCCTGCATTCCAGTGGGATCGTTAAGACGGTGAAGACTGATAT
CAGTGATGGTGAAAAGGTTCAGCATCTTCTGTATTTGATCAAGACACTTTTTCCTTATCT
TAAACAAATTTATGAAGAGCAAACAGAGGAGATAGAGGTTGAGGCTAATATTCAAGGGAT
ACCATCTTCTGGAATTACAATACCAGTGTCTTCATGCCCCAGTGATGAGCGTGTCTATTG
CAACCATTGTGCAACTTCAATTGTTGATCTCCACCGAAGCTGCCCAAAATGTTGTTATGA
GCTCTGCCTCAGCTGTTGCAAGGAGATTCGGAAGGGAAACCTTTTAAGGTGCACTGCAGT
GGATTTCCAGTATGTGGAGAGAGGATTTGATTATATGCATGGCGAAGATCCTTTACCAGA
ATCCTATTATATGGGAACGGTTGGGAATGATGTTGAGCCATTGACTGAATGGAATGCCAA
TAAGGATGGAAGCATTATCTGTGCCCCAAAAGAAATGGGTGGATGTGGTGGTAGTTTATT
GCAGCTCAAGCATATCCTCCCGGAAGACAGGATTTTAGATTTGAAAGAGAGAGCTGAACA
AGTGATGATGAAATTTGGGACTGAACAAGCTAGGAACTGTTCGACAAATGGCTCTGAGAT
GGTGAAGAGAGCATCTTCTAGAGAAGGCACTGATGACAATTACTTGTACTGTCCAGCTTC
ACATGACATTTTAAAGGAGGAGGAATTTTTGAACTTCCAGAGGCATTGGGCTAAAGGCGA
ACCAGTGATTGTTTGTAATGTTCTAGAGCAGACAACTGGTTTAAGCTGGGAGCCCATGGT
CATGTGGCGGGCACTTTGCGAAAACATGGATTCCAAGATGAGTTCGAAGATGTCAGAAGT
GAAGGCCGAGGAATGCCTATCTAGCTGCCAGGTAGATATCAGTACACGCCAATTTTTCAA
AGGCTACACAGAAGGAAGATCATATGATAATTTATGGCCTGAAATGCTGAAGCTAAAGGA
CTGGCCCCCATCTGATAAATTTGAGAATCTTTTGCCTCGCCACTGTGATGAGTTCATCAG
CGCATTGCCATTTCAGGAATATACAGACCCTAGGGCTGGCTTCCTTAACCTTGCTGTAAA
GTTGCCAAATACCATTCTCAAACCAGACTTGGGTCCAAAAACGTACATTGCTTATGGGAT
TGCTGAGGAGCTTGGCAGGGGGGATTCAGTAACTAAGCTTCACTGTGATATGTCAGATGC
AGTGAATATTTTGACACACACTGCAGAGGTAGTTCTAGATGACAATCAACGCCTGGCAGT
CAAAAGGTTGAAGAAGAAACACCAAGCCCAAGATAAGAGGGAAAATCTTGTTCCACCATG
TCAGCAAGAGGAAGATTTGCCTATCTCTAGGATTACAGTAACAGAAAATGAGGATGAGGA
AGAAGGGCCCTACTTTCCTGGTTTCCTTCCACCAGGGAAGACACAGAAAACCGGCAGTGC
TCTGTGGGATATTTTCAGGAGGGAAGATGTGCCCAAACTACAGGACTACCTTAGAAAGCA
CTCCAAAGAATTTAGGCATGTGTTTTGTTCTCCTGTAAACAGGGTTGTTCATCCGATTCA
CGATCAATCATTCTATTTGACTTTGGAGCACAAGAAGAAACTCAAGGAGGAATATGGAAT
TGAACCTTGGACATTTGAACAAAGAATTGGTGAGGCAGTATTCATTCCTGCAGGATGCCC
ACATCAAGTCAGAAATCTCAAGTCATGCACAAAAGTTGCTGTGGACTTCGTCTCTCCAGA
AAATATCCATGAATGCATCAGGCTGACAGAGGAGTTCCGCCAACTTCCTAAGAACCACAG
GGTCAGAGAAGACAAGCTCGAGATAAAGAAAATGATTGTATATGCAGTGGCTCAATCTCT
TAAAGATTTCTACTTGCTGGCATCAGGCTGAAGATTGAACATCACCTCTTGAAAAGAGAG
ATTAAGAGAGAGCAGATTTAGCTTATATTTTTTTGAAAAGCTCATCGGCTGTTTATCCTT
GTGTCCTTTTCTCATAACTGTATATAGAAGCCCAAGATGGTAGTGCAGTTTCTGGGCAGA
GCAGGCAATGCAGATTAA