Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00800.t01
CDS Infomation

cds chromosome:12X:10:364436:365968:1 gene:VIT_10s0116g00800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTGACTGACCTCCTTCTCCTCTCTTTGGCTCTCATCTTCCTCCGTTTCTGGTGG
CGGTACTGGTCAGTCACCGGCGGTGGTCCCAAGAACCTCCCGCCAGGCCCACCCGGGTGG
CCGCTGGTTGGGAACCTGGTGCAGGTGATCCTCCAGCGCCGTCCCTTCATCTACGTGGTA
CGTGATTTACGTGCCAAGTATGGACCTATCTTCACGCTACAGATGGGTCAGCGGACTCTG
GTTATTGTGACGAGCTCTGAGCTGATTCATGAAGCTTTGGTGCAGAGGGGGCCGATATTC
GCTAGCAGACCAGAGGATTCGCCAACACGGCTTGTGTTCAGTGTGGGGAAATGCGCCATT
AACTCGGCTCAGTATGGGCCGCTTTGGAGGACTTTGCGGCGGAACTTTGTGGCGGAGCTG
ATAACTCCCACGAGGATCAGGCAGTGCAGTTGGATACGGAAGTGGGCGCTGGAGAACCAC
ATGAGGAGGCTGCAAATGGAGGTTTCGGAGAAGGGTTTTGTGGAGGTGATGAGCAACTGT
AGGCTCACTATCTGTAGCATTCTTATATGTATATGTTTTGGTGCAAAGATCTCCGAGCGG
CGGATTAAGGAGATCGAGAGCGTACTGAAGGACGTCATGTTGATGACTACGCCGAAGCTC
CCGGACTTCCTGCCTGTTCTGACGCCTCTGCTGCGCCGGCAACTGAGAGAAGCGAAGGAG
CTGAGGAAGAAACAAATGGAGTGCATGGTTCCACTCGTGAGAAGCAGAAGAGCATTCGTG
GAGAGTAAGGGAGCCCCCGGCCGCAGCAGCTCAGAAATGGTGAGTCCGATCGGTGCAGCC
TATATCGACTCGCTTTTTGGGCTGGAGCCCGCCGAGCGAGGTCGGTTGGGAGAGGAAGAG
CTCGTTACACTGTGCTCGGAAATCATCAACGCCGGAACCGATACCAGTGCAACCACGGTT
GAGTGGGCTCTGCTTCACTTGGTGATGAACCAGGACATTCAGCAAAAGCTTTACAAAGAG
ATAATCGACTGTGTAGGAAAAAATGGAGTTGTCACGGAAGGAGACGTAGAGAAAATGCCC
TACCTCGGTGCAATCGTGAAGGAAACTTTCCGGCGCCACCCGCCCAGTCATTTCGTTCTA
TCCCATGCAGCCACCAAGGACACAGAGCTCGGCGGCTACACAATTCCAGCTGACGTGAAC
GTGGAGTTCTACACCGCCTGGGTGACAGAGGACCCGGACCTGTGGCAGGACCCGGCAGAG
TTCCGGCCTGAGAGGTTCCTCCAAGGAGACGGAGTCAACGTGGACGTGACCGGAACCCGG
GGAGTGAAAATGGTCCCATTTGGCGCGGGCAGGAGAATCTGTCCAGCCATGAATTTGGGC
ACGTTGCATGTGAATTTGTTGATTGCAAGGATGATCCATGCATTCAAATGGATCCCGGCC
CCGGGTTCCCCACCTGACCCGACTGAAACCTTTGCCTTCACAGTTGTCATGAAAAACCCC
CTTAAAGCTATCATCTTACCTAGATGA

Peptide Sequence

PEP ID

VIT_10s0116g00800.t01
PEP Infomation

pep chromosome:12X:10:364436:365968:1 gene:VIT_10s0116g00800 transcript:VIT_10s0116g00800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELTDLLLLSLALIFLRFWWRYWSVTGGGPKNLPPGPPGWPLVGNLVQVILQRRPFIYVV
RDLRAKYGPIFTLQMGQRTLVIVTSSELIHEALVQRGPIFASRPEDSPTRLVFSVGKCAI
NSAQYGPLWRTLRRNFVAELITPTRIRQCSWIRKWALENHMRRLQMEVSEKGFVEVMSNC
RLTICSILICICFGAKISERRIKEIESVLKDVMLMTTPKLPDFLPVLTPLLRRQLREAKE
LRKKQMECMVPLVRSRRAFVESKGAPGRSSSEMVSPIGAAYIDSLFGLEPAERGRLGEEE
LVTLCSEIINAGTDTSATTVEWALLHLVMNQDIQQKLYKEIIDCVGKNGVVTEGDVEKMP
YLGAIVKETFRRHPPSHFVLSHAATKDTELGGYTIPADVNVEFYTAWVTEDPDLWQDPAE
FRPERFLQGDGVNVDVTGTRGVKMVPFGAGRRICPAMNLGTLHVNLLIARMIHAFKWIPA
PGSPPDPTETFAFTVVMKNPLKAIILPR

Transcript Sequence

Transcript ID

VIT_10s0116g00800.t01
Transcript Infomation

cdna chromosome:12X:10:364436:365968:1 gene:VIT_10s0116g00800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAATGGAGTTGACTGACCTCCTTCTCCTCTCTTTGGCTCTCATCTTCCTCCGTTTCTGGT
GGCGGTACTGGTCAGTCACCGGCGGTGGTCCCAAGAACCTCCCGCCAGGCCCACCCGGGT
GGCCGCTGGTTGGGAACCTGGTGCAGGTGATCCTCCAGCGCCGTCCCTTCATCTACGTGG
TACGTGATTTACGTGCCAAGTATGGACCTATCTTCACGCTACAGATGGGTCAGCGGACTC
TGGTTATTGTGACGAGCTCTGAGCTGATTCATGAAGCTTTGGTGCAGAGGGGGCCGATAT
TCGCTAGCAGACCAGAGGATTCGCCAACACGGCTTGTGTTCAGTGTGGGGAAATGCGCCA
TTAACTCGGCTCAGTATGGGCCGCTTTGGAGGACTTTGCGGCGGAACTTTGTGGCGGAGC
TGATAACTCCCACGAGGATCAGGCAGTGCAGTTGGATACGGAAGTGGGCGCTGGAGAACC
ACATGAGGAGGCTGCAAATGGAGGTTTCGGAGAAGGGTTTTGTGGAGGTGATGAGCAACT
GTAGGCTCACTATCTGTAGCATTCTTATATGTATATGTTTTGGTGCAAAGATCTCCGAGC
GGCGGATTAAGGAGATCGAGAGCGTACTGAAGGACGTCATGTTGATGACTACGCCGAAGC
TCCCGGACTTCCTGCCTGTTCTGACGCCTCTGCTGCGCCGGCAACTGAGAGAAGCGAAGG
AGCTGAGGAAGAAACAAATGGAGTGCATGGTTCCACTCGTGAGAAGCAGAAGAGCATTCG
TGGAGAGTAAGGGAGCCCCCGGCCGCAGCAGCTCAGAAATGGTGAGTCCGATCGGTGCAG
CCTATATCGACTCGCTTTTTGGGCTGGAGCCCGCCGAGCGAGGTCGGTTGGGAGAGGAAG
AGCTCGTTACACTGTGCTCGGAAATCATCAACGCCGGAACCGATACCAGTGCAACCACGG
TTGAGTGGGCTCTGCTTCACTTGGTGATGAACCAGGACATTCAGCAAAAGCTTTACAAAG
AGATAATCGACTGTGTAGGAAAAAATGGAGTTGTCACGGAAGGAGACGTAGAGAAAATGC
CCTACCTCGGTGCAATCGTGAAGGAAACTTTCCGGCGCCACCCGCCCAGTCATTTCGTTC
TATCCCATGCAGCCACCAAGGACACAGAGCTCGGCGGCTACACAATTCCAGCTGACGTGA
ACGTGGAGTTCTACACCGCCTGGGTGACAGAGGACCCGGACCTGTGGCAGGACCCGGCAG
AGTTCCGGCCTGAGAGGTTCCTCCAAGGAGACGGAGTCAACGTGGACGTGACCGGAACCC
GGGGAGTGAAAATGGTCCCATTTGGCGCGGGCAGGAGAATCTGTCCAGCCATGAATTTGG
GCACGTTGCATGTGAATTTGTTGATTGCAAGGATGATCCATGCATTCAAATGGATCCCGG
CCCCGGGTTCCCCACCTGACCCGACTGAAACCTTTGCCTTCACAGTTGTCATGAAAAACC
CCCTTAAAGCTATCATCTTACCTAGATGAAAAG