Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00520.t01
CDS Infomation

cds chromosome:12X:10:236147:238110:-1 gene:VIT_10s0116g00520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:E0CVL4]
Sequence

ATGGAGTTGCAGGCTTCTCCAGTGCCTATTCTTCTCTGCATTGCAGCTCTCATGGCTGCC
TCTTGCCCTCCATCCCAAGCAGAAGGTCAGTCAAAGAGCTCGTTTGAAGATAGTTTTGAT
ATAATGTGGTCCGAGGACCATTTCAAAACGTCTGAAGATGGGCAGATCTGGTACCTCTCC
TTGGACAAAGAAACAGGTTGTGGGTTTCAGACAAAACAAAGATACAGATTCGGGTGGTTC
AGCATGAAGCTCAAGCTGGTCGGCGGTGACTCTGCCGGCGTGGTCACAGCTTATTATATG
TGCTCAGAAAATGGAGCAGGGCCAGAGAGGGATGAGCTAGACATAGAGTTTTTGGGGAAC
AGAAGTGGAGAACCTTATCTCATTCAGACAAATGTATATAAGAATGGCACTGGAGGCCGT
GAGATGAGGCACATGCTTTGGTTCGACCCCACTGAGGAGTTTCATTCATACTCCATCCTT
TGGAATAACGAGCAGATTTTGTTCGTTGTGGATAGAGTTCCAATCAGGGTATACAAAAAC
AATGGGAAAGCAAACAACTTCTTCCCCAATGAGAAGCCCATGTACCTGTTCTCCAGTATA
TGGAATGCAGATGACTGGGCCACAAGAGGTGGGATGGAGAAGACAGATTGGAAGAAGGCC
CCATTCGTATCCTCTTACAAGGACTTCAGTGTTGATGGGTGCCAGTGGGAGGATCCATAC
CCTGCATGTGTCTCCACCACGACTCAAAACTGGTGGGATCAGTATGAAGCTTGGCACCTC
TCTGATTCCCAGAAGATGGATTTCGCTTGGGTGGAGAGGAACCTTGTCATTTATGACTAT
TGCAAGGACACAGAAAGATACCCTCAAATGCTAGAGGAGTGTTCATTGAGTCCATGGGAT
TAA

Peptide Sequence

PEP ID

VIT_10s0116g00520.t01
PEP Infomation

pep chromosome:12X:10:236147:238110:-1 gene:VIT_10s0116g00520 transcript:VIT_10s0116g00520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:E0CVL4]
Sequence

MELQASPVPILLCIAALMAASCPPSQAEGQSKSSFEDSFDIMWSEDHFKTSEDGQIWYLS
LDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDELDIEFLGN
RSGEPYLIQTNVYKNGTGGREMRHMLWFDPTEEFHSYSILWNNEQILFVVDRVPIRVYKN
NGKANNFFPNEKPMYLFSSIWNADDWATRGGMEKTDWKKAPFVSSYKDFSVDGCQWEDPY
PACVSTTTQNWWDQYEAWHLSDSQKMDFAWVERNLVIYDYCKDTERYPQMLEECSLSPWD

Transcript Sequence

Transcript ID

VIT_10s0116g00520.t01
Transcript Infomation

cdna chromosome:12X:10:236147:238110:-1 gene:VIT_10s0116g00520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:E0CVL4]
Sequence

GTAAGATTGTACATAGAGCAGATCAAAGCTTCTTTTGAAAAGGAGTGATTATCTTCTTCT
CAAAGATCCACCATTGGCAACCCAAAATGGAGTTGCAGGCTTCTCCAGTGCCTATTCTTC
TCTGCATTGCAGCTCTCATGGCTGCCTCTTGCCCTCCATCCCAAGCAGAAGGTCAGTCAA
AGAGCTCGTTTGAAGATAGTTTTGATATAATGTGGTCCGAGGACCATTTCAAAACGTCTG
AAGATGGGCAGATCTGGTACCTCTCCTTGGACAAAGAAACAGGTTGTGGGTTTCAGACAA
AACAAAGATACAGATTCGGGTGGTTCAGCATGAAGCTCAAGCTGGTCGGCGGTGACTCTG
CCGGCGTGGTCACAGCTTATTATATGTGCTCAGAAAATGGAGCAGGGCCAGAGAGGGATG
AGCTAGACATAGAGTTTTTGGGGAACAGAAGTGGAGAACCTTATCTCATTCAGACAAATG
TATATAAGAATGGCACTGGAGGCCGTGAGATGAGGCACATGCTTTGGTTCGACCCCACTG
AGGAGTTTCATTCATACTCCATCCTTTGGAATAACGAGCAGATTTTGTTCGTTGTGGATA
GAGTTCCAATCAGGGTATACAAAAACAATGGGAAAGCAAACAACTTCTTCCCCAATGAGA
AGCCCATGTACCTGTTCTCCAGTATATGGAATGCAGATGACTGGGCCACAAGAGGTGGGA
TGGAGAAGACAGATTGGAAGAAGGCCCCATTCGTATCCTCTTACAAGGACTTCAGTGTTG
ATGGGTGCCAGTGGGAGGATCCATACCCTGCATGTGTCTCCACCACGACTCAAAACTGGT
GGGATCAGTATGAAGCTTGGCACCTCTCTGATTCCCAGAAGATGGATTTCGCTTGGGTGG
AGAGGAACCTTGTCATTTATGACTATTGCAAGGACACAGAAAGATACCCTCAAATGCTAG
AGGAGTGTTCATTGAGTCCATGGGATTAATGAACTATAAACGGACACA