Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00400.t01
CDS Infomation

cds chromosome:12X:10_random:189792:194978:-1 gene:VIT_10s0116g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAATCGTTGCTGAAGACGCGGTCAATCAGTTCGAAGCATTGATGAACCAGGTTGAC
GAGCCTCTGAAGAAAACATTCCAGAATATTCATCAAGGATATCCAACTGGAACTCTGGTG
CGTTTTCTAAAAGCAAGAGAATGGAATGTTCCCAAAGCCCACAAAATGTTGGTGGATTGC
CTAAACTGGAGGGTGGAAAATGACATTGACAATATTTTGGCAAAACCTATAGTTCCTACT
GATTTGTACAGAGGAGTGCGTGATTCACAGCTCATAGGATTGTCAGGTTACACAAAAGAG
GGCCTTCCGGTGTTTGCTATTGGTGCAGGGTTCAGCACCTTTGACAAAGCATCTGTTCAC
TACTATGTGCAATCACACATTCAAATCAATGAATACCGGGATCGTGTAATTTTGCCTTCT
GCATCAAAAAAGCATGGGCGACATATTACTTCTTGTGTGAAGGTCTTAGATATGACTGGC
CTAAAGCTTTCAGCACTGAGCCAGATAAAGCTACTGACTATTATGTCAACCATCGATGAC
TTGAACTACCCAGAGAAGACAAATACATATTACATTGTAAACGCCCCATATATATTTTCA
GCATGTTGGAAGGTTGTCAAACCTCTTTTGCAGGAAAGAACAAGAAAAAAGATTCAGGTC
TTGCCAGGTTGTGGACGAGATGAGCTGCTAAAGATAATGGATTATGCATCCCTCCCCCAT
TTCTGTAGAAGAGAAGGCTCTGGATCATCCCGCCATTCAGGGAATGAAACTGATAATTGC
TATACCTTGGATCATCCCTTCCATCAACAGCTTTATAACTACATCAAGCAACAAGCCTCA
ATTATTGCACCGGCTGGACCATATAAACAGGGGTCTATTCATGTGCATCTGCCCGAGTCA
GCTGCAGAAGAATCAGAGATTGCTAAAACCATAGAATCTGAGTTACAGAAGTTTGGGAAT
CAGACTAGGCTCACAGACTCATTGGATGCCCTGAAAGTCAGTGATAACAGAAACTAA

Peptide Sequence

PEP ID

VIT_10s0116g00400.t01
PEP Infomation

pep chromosome:12X:10_random:189792:194978:-1 gene:VIT_10s0116g00400 transcript:VIT_10s0116g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGIVAEDAVNQFEALMNQVDEPLKKTFQNIHQGYPTGTLVRFLKAREWNVPKAHKMLVDC
LNWRVENDIDNILAKPIVPTDLYRGVRDSQLIGLSGYTKEGLPVFAIGAGFSTFDKASVH
YYVQSHIQINEYRDRVILPSASKKHGRHITSCVKVLDMTGLKLSALSQIKLLTIMSTIDD
LNYPEKTNTYYIVNAPYIFSACWKVVKPLLQERTRKKIQVLPGCGRDELLKIMDYASLPH
FCRREGSGSSRHSGNETDNCYTLDHPFHQQLYNYIKQQASIIAPAGPYKQGSIHVHLPES
AAEESEIAKTIESELQKFGNQTRLTDSLDALKVSDNRN

Transcript Sequence

Transcript ID

VIT_10s0116g00400.t01
Transcript Infomation

cdna chromosome:12X:10_random:189792:194978:-1 gene:VIT_10s0116g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGACTGTGGGTGGTTGACTGGATTAAGGTAACTTGGATGGTTTTTCGGAGAGATCAAC
GTGAAGGATGAGTTTGTATTTTAAATTTGAAGCTTCAGAAAAACTTCCTGAGAAAGACCA
GCAGGGTAATGAAAATGGTTTTGAAATTCGAAGGAAAAACCCAAATAGTGGTTTATTTCT
GCATTAAATATATATGGGTGTGTAGGTGGGAAGACGAGAGAGCTGAGAGGCCCGCCTTTC
TTGACCCCACAAAGTCTCTCTCTTCCACCCTCTCTCTCTCTCTCTCTCACTCTGAGCCTC
TCACCTGCAAAGTGGAATCTCTCTCTGACTGTGTCTCCTCTTTCGCTTCTTTCTCTCTCT
CTTTTTCTTTCTTTTGCCAATATCACTGAAAGAGAGAGGGAAGGAGGAAAAAAGAAAAAG
AAACAAAAAAAATTTAAGAACATAAAAGACCCAAAAAGAGCTGCAAAGTTTTGATCTTCA
ATTTTGCGGAAACTGCTGGCATTTTGAAATGGGAATCGTTGCTGAAGACGCGGTCAATCA
GTTCGAAGCATTGATGAACCAGGTTGACGAGCCTCTGAAGAAAACATTCCAGAATATTCA
TCAAGGATATCCAACTGGAACTCTGGTGCGTTTTCTAAAAGCAAGAGAATGGAATGTTCC
CAAAGCCCACAAAATGTTGGTGGATTGCCTAAACTGGAGGGTGGAAAATGACATTGACAA
TATTTTGGCAAAACCTATAGTTCCTACTGATTTGTACAGAGGAGTGCGTGATTCACAGCT
CATAGGATTGTCAGGTTACACAAAAGAGGGCCTTCCGGTGTTTGCTATTGGTGCAGGGTT
CAGCACCTTTGACAAAGCATCTGTTCACTACTATGTGCAATCACACATTCAAATCAATGA
ATACCGGGATCGTGTAATTTTGCCTTCTGCATCAAAAAAGCATGGGCGACATATTACTTC
TTGTGTGAAGGTCTTAGATATGACTGGCCTAAAGCTTTCAGCACTGAGCCAGATAAAGCT
ACTGACTATTATGTCAACCATCGATGACTTGAACTACCCAGAGAAGACAAATACATATTA
CATTGTAAACGCCCCATATATATTTTCAGCATGTTGGAAGGTTGTCAAACCTCTTTTGCA
GGAAAGAACAAGAAAAAAGATTCAGGTCTTGCCAGGTTGTGGACGAGATGAGCTGCTAAA
GATAATGGATTATGCATCCCTCCCCCATTTCTGTAGAAGAGAAGGCTCTGGATCATCCCG
CCATTCAGGGAATGAAACTGATAATTGCTATACCTTGGATCATCCCTTCCATCAACAGCT
TTATAACTACATCAAGCAACAAGCCTCAATTATTGCACCGGCTGGACCATATAAACAGGG
GTCTATTCATGTGCATCTGCCCGAGTCAGCTGCAGAAGAATCAGAGATTGCTAAAACCAT
AGAATCTGAGTTACAGAAGTTTGGGAATCAGACTAGGCTCACAGACTCATTGGATGCCCT
GAAAGTCAGTGATAACAGAAACTAAAGAGATCATTTCCTCATTGGCAGCTGCTAGACAAG
GGATATGCATGTCACTTCTGCCATGGGGGGAATTCAACTATTATTTGTAGTCGTAGCAGC
TCACTTTATCTCAGAGTGAGTTTTGCTAGCTCAAGCTAATTATATGTACTTGCTATTTTA
TCCACGGGCCTTAATGGTGTAAGAAAAAGGCACCTAAGAATAGTAATCCATGTATCTCTA
CCTGCACATCTTGTAAGTTAATTTCAGGAAATTCTGTTCTAGCCTTCAACTGTTTCAGGC
TTCCATGTTTGCCAGGGACAGTGAGGAAGGTGCAATATAAACTGTCAATGTTCTGGGTC