Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00330.t01
CDS Infomation

cds chromosome:12X:10_random:140983:150797:-1 gene:VIT_10s0116g00330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCAGTGTGGAGACTCCTGAAGGCTGCTCAGTCATGGCGCCCGATTGTTTCTCCT
AAAACCCTAACCCCTCCGCCGCTGCGTTTTCCTCCACGCTTCTGTCACAGGCCTTTTGAA
CAACAGATTAATCCCAGAATATCTGAAGCCCAGCTGCCTCCTGTATCGGTTTCTATAGTT
CCATCAGTCCTAGTTGGTTTGTTTGGGTTTGGATTGCTTGAAATTGCTCATGCAGAGAGT
GACCCGGGTGCTGATAAAACTCCTTTGCCCTCTCAATCAAGTCCTTCGCCATCTGAATCT
CCTCCAAGTTACACAAATTTGGAGGAAAATGCCAGAAAATTACGAGATCGATTAGAAGAG
TTAATTAGAACTAAAGGAATGAAATACGGTTCTTATCCACGTTTTACCGTTGCTCTTAAG
GGCCAAAAGGTCACGATCAAGTTCCAAATTCCTCCTACATGTGAAGTTCCATGCTTGATT
GCAAAACTTGTTGCACAGCTTGGAATGAAAGTTGAAGAGCGTAGTGGTGGTTCCGACATG
ATAATGCGAGCTTGGGACAGTGGAATTGCTTGGCAACTAATGCTTAGTCGTCTGGGAAAA
CAAAATAAAACTGGAGCAGAACAGGTGCATTCACAGTATACAAATGCAAATGAGGGAGAT
CTCTGCATTCTCATATTTCAGTCGCTCATCAGTGCTGACAAAGCGGAAATTGAGTTCATA
AAGCAAGGAAGCTTCAGTTCTGAGGAGCTTGATGCCTTGGTTTCTGTGTTACAATTTGCT
GGCGGAAGAGTGGAACAAAACAAAACATTGGAAAGAAGACCAAGAGGAGATGCTCCTCAG
ATGCATTCTGCACAAAAATCAATTGCTAGTCTTGAGGCCATGGGAGTGAGAGTTTTTGGA
GCTGATGAACCCCAAGGGGGTCTCTCTAAGAATGAGGTGTTGTGGGACAATATTGCTGGA
TATGACCAACAAAAACGACAAATAGAAGATGAGATAGTGTTTGCTCTGCATAGTCCTGAT
GTATATGATGATGTTGCTCGTGGGACCCGGCAGAAGTTTGAGTCAAACAGACCTCGAGCT
GTTCTGTTTGAAGGCCCTCCAGGTACAGGGAAGACGTCTTGTGCTCGTGTAATTGCTAAT
CAAGCAGGTGTGCCATTGGTTTACCTGCCACTGGAATCTATTATGTCAAAGTACTACGGT
GAAAGTGAGCGCTTGCTAGGGAAAGTGTTTGTGCATGCCAATGAGTTCCCAGAAGGTGCC
ATTGTTTTTCTAGATGAGGTTGATTCTTTTGCTGTTTCTCGTAGTCGAGAAATGCATGAG
GCTACCCGAAGAATTTTATCAGTGATATTGCGACAGATTGATGGATTTGAGCAGGATAAA
AAAGTGGTGGTAATTGCAGCAACAAATAGAAAGCAAGACCTTGATCCTGCTCTGATGAGT
CGGTTTGATTCGATGATCACCTTTGGCCTACCTGACAACCATGATCGTCAGAAAATAGCA
GCTCAGTTTGCAAAGCATCTGACAGAGTCCGAATTAGTTGAATTTGCCACAGCAACAGAA
GGCATGTCTGGAAGGGATATCAGGGACATCTGTCAACAAGCAGAGCGGCATTGGGCATCG
AAGGTGATTCGAGGCCAAGCCCCAAAGGATGGAGACCAAGTGATTCTACCCCCCATCCAA
GTGTATATTGAAAGTGCTAAAACCCGGGCGAATACTCTACTCAGCATTGCAGACCAGAAA
ACCGAAAAATCTAACCGTAATCAGACGCAGCCCCAGTTAGCCTTCAGCTGA

Peptide Sequence

PEP ID

VIT_10s0116g00330.t01
PEP Infomation

pep chromosome:12X:10_random:140983:150797:-1 gene:VIT_10s0116g00330 transcript:VIT_10s0116g00330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASVWRLLKAAQSWRPIVSPKTLTPPPLRFPPRFCHRPFEQQINPRISEAQLPPVSVSIV
PSVLVGLFGFGLLEIAHAESDPGADKTPLPSQSSPSPSESPPSYTNLEENARKLRDRLEE
LIRTKGMKYGSYPRFTVALKGQKVTIKFQIPPTCEVPCLIAKLVAQLGMKVEERSGGSDM
IMRAWDSGIAWQLMLSRLGKQNKTGAEQVHSQYTNANEGDLCILIFQSLISADKAEIEFI
KQGSFSSEELDALVSVLQFAGGRVEQNKTLERRPRGDAPQMHSAQKSIASLEAMGVRVFG
ADEPQGGLSKNEVLWDNIAGYDQQKRQIEDEIVFALHSPDVYDDVARGTRQKFESNRPRA
VLFEGPPGTGKTSCARVIANQAGVPLVYLPLESIMSKYYGESERLLGKVFVHANEFPEGA
IVFLDEVDSFAVSRSREMHEATRRILSVILRQIDGFEQDKKVVVIAATNRKQDLDPALMS
RFDSMITFGLPDNHDRQKIAAQFAKHLTESELVEFATATEGMSGRDIRDICQQAERHWAS
KVIRGQAPKDGDQVILPPIQVYIESAKTRANTLLSIADQKTEKSNRNQTQPQLAFS

Transcript Sequence

Transcript ID

VIT_10s0116g00330.t01
Transcript Infomation

cdna chromosome:12X:10_random:140983:150797:-1 gene:VIT_10s0116g00330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTTCGCATACAGTAGTCTCAGTGACTTCCGACTCGAGTGAGTGATCAACTTCATGGCT
TCAGTGTGGAGACTCCTGAAGGCTGCTCAGTCATGGCGCCCGATTGTTTCTCCTAAAACC
CTAACCCCTCCGCCGCTGCGTTTTCCTCCACGCTTCTGTCACAGGCCTTTTGAACAACAG
ATTAATCCCAGAATATCTGAAGCCCAGCTGCCTCCTGTATCGGTTTCTATAGTTCCATCA
GTCCTAGTTGGTTTGTTTGGGTTTGGATTGCTTGAAATTGCTCATGCAGAGAGTGACCCG
GGTGCTGATAAAACTCCTTTGCCCTCTCAATCAAGTCCTTCGCCATCTGAATCTCCTCCA
AGTTACACAAATTTGGAGGAAAATGCCAGAAAATTACGAGATCGATTAGAAGAGTTAATT
AGAACTAAAGGAATGAAATACGGTTCTTATCCACGTTTTACCGTTGCTCTTAAGGGCCAA
AAGGTCACGATCAAGTTCCAAATTCCTCCTACATGTGAAGTTCCATGCTTGATTGCAAAA
CTTGTTGCACAGCTTGGAATGAAAGTTGAAGAGCGTAGTGGTGGTTCCGACATGATAATG
CGAGCTTGGGACAGTGGAATTGCTTGGCAACTAATGCTTAGTCGTCTGGGAAAACAAAAT
AAAACTGGAGCAGAACAGGTGCATTCACAGTATACAAATGCAAATGAGGGAGATCTCTGC
ATTCTCATATTTCAGTCGCTCATCAGTGCTGACAAAGCGGAAATTGAGTTCATAAAGCAA
GGAAGCTTCAGTTCTGAGGAGCTTGATGCCTTGGTTTCTGTGTTACAATTTGCTGGCGGA
AGAGTGGAACAAAACAAAACATTGGAAAGAAGACCAAGAGGAGATGCTCCTCAGATGCAT
TCTGCACAAAAATCAATTGCTAGTCTTGAGGCCATGGGAGTGAGAGTTTTTGGAGCTGAT
GAACCCCAAGGGGGTCTCTCTAAGAATGAGGTGTTGTGGGACAATATTGCTGGATATGAC
CAACAAAAACGACAAATAGAAGATGAGATAGTGTTTGCTCTGCATAGTCCTGATGTATAT
GATGATGTTGCTCGTGGGACCCGGCAGAAGTTTGAGTCAAACAGACCTCGAGCTGTTCTG
TTTGAAGGCCCTCCAGGTACAGGGAAGACGTCTTGTGCTCGTGTAATTGCTAATCAAGCA
GGTGTGCCATTGGTTTACCTGCCACTGGAATCTATTATGTCAAAGTACTACGGTGAAAGT
GAGCGCTTGCTAGGGAAAGTGTTTGTGCATGCCAATGAGTTCCCAGAAGGTGCCATTGTT
TTTCTAGATGAGGTTGATTCTTTTGCTGTTTCTCGTAGTCGAGAAATGCATGAGGCTACC
CGAAGAATTTTATCAGTGATATTGCGACAGATTGATGGATTTGAGCAGGATAAAAAAGTG
GTGGTAATTGCAGCAACAAATAGAAAGCAAGACCTTGATCCTGCTCTGATGAGTCGGTTT
GATTCGATGATCACCTTTGGCCTACCTGACAACCATGATCGTCAGAAAATAGCAGCTCAG
TTTGCAAAGCATCTGACAGAGTCCGAATTAGTTGAATTTGCCACAGCAACAGAAGGCATG
TCTGGAAGGGATATCAGGGACATCTGTCAACAAGCAGAGCGGCATTGGGCATCGAAGGTG
ATTCGAGGCCAAGCCCCAAAGGATGGAGACCAAGTGATTCTACCCCCCATCCAAGTGTAT
ATTGAAAGTGCTAAAACCCGGGCGAATACTCTACTCAGCATTGCAGACCAGAAAACCGAA
AAATCTAACCGTAATCAGACGCAGCCCCAGTTAGCCTTCAGCTGA