Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00100.t01
CDS Infomation

cds chromosome:12X:10_random:52587:61023:1 gene:VIT_10s0116g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTGAACGGAGCTCTGTCTTTCTCTTGCTCTCACTCACACTCTCGCTTCTTCTTC
GCTCTTCTAGTGTTGTTCTCCTTCTCTGCGATCCTTCCCCCGTTGTCTGTTTACGGCGCT
ACTGATCCTTCTGATGTTCAAGGTCTTCAGGTTATTTACAATTCACTGAATGGTCCTTCC
CAGCTAACTGGTTGGACAAATAGTAGTGGTGATCCGTGTGGAGAGTCATGGAAAGGGGTT
ACTTGTGAGGGTTCAGCTGTTGTTTCCATTCAGATTTCCGGGTTAGGGCTGAATGGAACC
ATGGGATACTTGCTCTCAAACTTTTTGTCATTGAGGACATTAGATATGAGTGACAACAAC
ATTCACGACACAATTCCATATCAGTTACCGCCAAATCTCACAAACTTAAACCTGGCGAGC
AACAATTTAACTGGGAGTTTTCCGTATTCCATTTCTACCATGGTTTCTCTTAATTATTTG
AATGTTAGCCACAATTCAATCTCCCAGTCAATTGGAGACATATTTGCTAAACTTGCTGGC
CTCACAATCTTGGATCTCTCTGTGAACAACTTTACTGGAGATCTTCCTAATTCCTTTACT
TCATTGTCCAATCTTTCTACCCTCTATTTGCAGAACAATCAATTAACTGGTCCTCTGAGT
GTTCTTACTGGTTTGCCTTTGACTGATCTAAATGTTGCAAACAACAATTTCAGTGGATGG
ATACCATCAGAGCTTAGATCAATCCGAAAATTTATATATGATGGAAATTCATTCGACAAT
GGTCCTGCTCCTCCTCCTCCACCGTATACCCCACCTCCTCCCAGTAGATCTCGTAGTAAT
CGCACTCATTCTCCACCAGAAGCACGCACGCCCTCAAGTTCTGATGGCCAGTCATCGAAC
TCAGATAATGGAAATAAGGGCTTGGCCATTGGTCCTATTATAGGCATTGTTCTAGGTTCA
TTGCTGGTTCTTGTTGCATTGATTGCTCTTGTTTTTTGTGTTCGAAAAGCTAAAAAGAAG
GGAACTGGTGCAAGACCATCTGTGGGAAGTGTTCCTGTTGTCACAGAAAAAGTAAATACA
GAAACAATGCAAGAGCAGAGGACAAAGTTCACAGCCACTGTAACAGATCTGAAGCCTCCA
CCTGCAGAAAACTTGATGGTTGAGAGGGTACAAGGGAAAAATGGATCTGGAAAGAGAGTT
AAATCCCCTATAACTGCTACCTCATACACCGTTGCTTCTCTTCAAACAGCAACAAACAGC
TTTAGTCAAGAATTTCTTATTGGTGAAGGTTCCCTTGGCCGTGTTTATAGAGCTGATTTT
CCAAATGGAAAGACAATGGCAATTAAGAAGATAGACAATGCAGCACTGTCTTTACAAGAA
GAAGATAATTTTCTTGAGGCTGTTTCAAATATGTCCCGTCTGAGGCACCAAAACATTGTT
ACACTAGTGGGATATTGTGCAGAGCATGGGCAACGTCTTCTGGTTTATGAGTATATTGGA
AATGGGAGTCTACATGATATGCTGCACTTCACTGATGATAGTGGCAAGACACTGACATGG
AATGCACGTGTAAGAGTAGCCCTTGGCACTGCTCGAGCTCTAGAGTATTTGCATGAAGTT
TGCCTGCCTTCTACTGTACATAGAAACTTCAAATCGGCAAATATTTTGCTTGATGAAGAG
CTCAACCCCCATTTATCAGACTGTGGCCTAGCTGCCCTCACACCAAACACAGAGCGACAG
GTTTCAACTCAGATGGTTGGTTCATTTGGTTACAGTGCTCCTGAATTTGCTTTATCTGGT
ATATACACTGTAAAAAGCGATGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTGTTGACA
GGTCGGAAGCCCCTGGACAGTTCAAGAGTGAGATCAGAACAGTCACTTGTGAGATGGGCT
ACTCCCCAACTTCATGATATAGATGCCCTGGCAAAAATGGTTGATCCTTCCCTAAATGGC
ATGTATCCTGCAAAGTCTTTGTCACGTTTTGCTGACATCATTGCCTTGTGTGTTCAGCCG
GAGCCAGAGTTTCGACCTCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAGTACAA
AGAGCAAGTGTGGTCAAGCGGCGCTCAAGTGATGAATCCGGTTTTGTGTACAAGACTCCA
GAGCATGAGGCAATTGACATGTCATTTTAA

Peptide Sequence

PEP ID

VIT_10s0116g00100.t01
PEP Infomation

pep chromosome:12X:10_random:52587:61023:1 gene:VIT_10s0116g00100 transcript:VIT_10s0116g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVNGALSFSCSHSHSRFFFALLVLFSFSAILPPLSVYGATDPSDVQGLQVIYNSLNGPS
QLTGWTNSSGDPCGESWKGVTCEGSAVVSIQISGLGLNGTMGYLLSNFLSLRTLDMSDNN
IHDTIPYQLPPNLTNLNLASNNLTGSFPYSISTMVSLNYLNVSHNSISQSIGDIFAKLAG
LTILDLSVNNFTGDLPNSFTSLSNLSTLYLQNNQLTGPLSVLTGLPLTDLNVANNNFSGW
IPSELRSIRKFIYDGNSFDNGPAPPPPPYTPPPPSRSRSNRTHSPPEARTPSSSDGQSSN
SDNGNKGLAIGPIIGIVLGSLLVLVALIALVFCVRKAKKKGTGARPSVGSVPVVTEKVNT
ETMQEQRTKFTATVTDLKPPPAENLMVERVQGKNGSGKRVKSPITATSYTVASLQTATNS
FSQEFLIGEGSLGRVYRADFPNGKTMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHQNIV
TLVGYCAEHGQRLLVYEYIGNGSLHDMLHFTDDSGKTLTWNARVRVALGTARALEYLHEV
CLPSTVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSG
IYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPSLNG
MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRSSDESGFVYKTP
EHEAIDMSF

Transcript Sequence

Transcript ID

VIT_10s0116g00100.t01
Transcript Infomation

cdna chromosome:12X:10_random:52587:61023:1 gene:VIT_10s0116g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTGAACGGAGCTCTGTCTTTCTCTTGCTCTCACTCACACTCTCGCTTCTTCTTC
GCTCTTCTAGTGTTGTTCTCCTTCTCTGCGATCCTTCCCCCGTTGTCTGTTTACGGCGCT
ACTGATCCTTCTGATGTTCAAGGTCTTCAGGTTATTTACAATTCACTGAATGGTCCTTCC
CAGCTAACTGGTTGGACAAATAGTAGTGGTGATCCGTGTGGAGAGTCATGGAAAGGGGTT
ACTTGTGAGGGTTCAGCTGTTGTTTCCATTCAGATTTCCGGGTTAGGGCTGAATGGAACC
ATGGGATACTTGCTCTCAAACTTTTTGTCATTGAGGACATTAGATATGAGTGACAACAAC
ATTCACGACACAATTCCATATCAGTTACCGCCAAATCTCACAAACTTAAACCTGGCGAGC
AACAATTTAACTGGGAGTTTTCCGTATTCCATTTCTACCATGGTTTCTCTTAATTATTTG
AATGTTAGCCACAATTCAATCTCCCAGTCAATTGGAGACATATTTGCTAAACTTGCTGGC
CTCACAATCTTGGATCTCTCTGTGAACAACTTTACTGGAGATCTTCCTAATTCCTTTACT
TCATTGTCCAATCTTTCTACCCTCTATTTGCAGAACAATCAATTAACTGGTCCTCTGAGT
GTTCTTACTGGTTTGCCTTTGACTGATCTAAATGTTGCAAACAACAATTTCAGTGGATGG
ATACCATCAGAGCTTAGATCAATCCGAAAATTTATATATGATGGAAATTCATTCGACAAT
GGTCCTGCTCCTCCTCCTCCACCGTATACCCCACCTCCTCCCAGTAGATCTCGTAGTAAT
CGCACTCATTCTCCACCAGAAGCACGCACGCCCTCAAGTTCTGATGGCCAGTCATCGAAC
TCAGATAATGGAAATAAGGGCTTGGCCATTGGTCCTATTATAGGCATTGTTCTAGGTTCA
TTGCTGGTTCTTGTTGCATTGATTGCTCTTGTTTTTTGTGTTCGAAAAGCTAAAAAGAAG
GGAACTGGTGCAAGACCATCTGTGGGAAGTGTTCCTGTTGTCACAGAAAAAGTAAATACA
GAAACAATGCAAGAGCAGAGGACAAAGTTCACAGCCACTGTAACAGATCTGAAGCCTCCA
CCTGCAGAAAACTTGATGGTTGAGAGGGTACAAGGGAAAAATGGATCTGGAAAGAGAGTT
AAATCCCCTATAACTGCTACCTCATACACCGTTGCTTCTCTTCAAACAGCAACAAACAGC
TTTAGTCAAGAATTTCTTATTGGTGAAGGTTCCCTTGGCCGTGTTTATAGAGCTGATTTT
CCAAATGGAAAGACAATGGCAATTAAGAAGATAGACAATGCAGCACTGTCTTTACAAGAA
GAAGATAATTTTCTTGAGGCTGTTTCAAATATGTCCCGTCTGAGGCACCAAAACATTGTT
ACACTAGTGGGATATTGTGCAGAGCATGGGCAACGTCTTCTGGTTTATGAGTATATTGGA
AATGGGAGTCTACATGATATGCTGCACTTCACTGATGATAGTGGCAAGACACTGACATGG
AATGCACGTGTAAGAGTAGCCCTTGGCACTGCTCGAGCTCTAGAGTATTTGCATGAAGTT
TGCCTGCCTTCTACTGTACATAGAAACTTCAAATCGGCAAATATTTTGCTTGATGAAGAG
CTCAACCCCCATTTATCAGACTGTGGCCTAGCTGCCCTCACACCAAACACAGAGCGACAG
GTTTCAACTCAGATGGTTGGTTCATTTGGTTACAGTGCTCCTGAATTTGCTTTATCTGGT
ATATACACTGTAAAAAGCGATGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTGTTGACA
GGTCGGAAGCCCCTGGACAGTTCAAGAGTGAGATCAGAACAGTCACTTGTGAGATGGGCT
ACTCCCCAACTTCATGATATAGATGCCCTGGCAAAAATGGTTGATCCTTCCCTAAATGGC
ATGTATCCTGCAAAGTCTTTGTCACGTTTTGCTGACATCATTGCCTTGTGTGTTCAGCCG
GAGCCAGAGTTTCGACCTCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAGTACAA
AGAGCAAGTGTGGTCAAGCGGCGCTCAAGTGATGAATCCGGTTTTGTGTACAAGACTCCA
GAGCATGAGGCAATTGACATGTCATTTTAAGCGTCCAGCCATACTGAAGTCACAAGCGAT
GCTTGCAATTTTGTCTCAGTTATGCCAAGGTCAAAGGCTGATCAAAGTGCGCACATTCAG
AAAAAGAAGAAAAAGATGTGAAACAGAGACCTGAAGGTTATGTAATTATATCCCATACAA
TTTCATTTGCAACCAACTACATTACATTGCAAATTAAGGTATATATTT