Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g00030.t01
CDS Infomation

cds chromosome:12X:10_random:17537:19181:1 gene:VIT_10s0116g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTTCTCTCTCGTCTCCGGCCAATCTCTTCCCACCGTTGCCGCTTTTTCTCCTCA
ATCCTCTCTCCCGACTCCGCCACTCCACTCTCCTCCAAGGAGAAATCCAGAGCCGCTCTC
TCCCTCCTCAAATCCGAGCAAGACCCACAGCGCATCCTGGAAATCTGCCGCGCCGCCGCG
CTCACTCCGGAGTCCCACCTCGATCGCGTCGCCTTCTCCGTCGCCATCTCCAAGCTGGCC
GACTCCAAGCACTTCGATTCCATCCGCCACTTCCTCGATGAGCTCAAGGCCCGCCCCGAC
CTCCGAACCGAGCGCTTCGTGTCGCACGCCATCGTCCTCTTCGGCCAGGCCGGGATGCTA
AACGACGCCGTTCGGACGTTCGAGCAAATGCACCAGCTGGGTGTCGATCGTACGGTGAGA
TCACTCAATGCCCTGCTGTTTTCTTGCATTTTGGCGAAGAATTACAAGGAGGCGAATAGG
ATTTTTCTTGAATTCCCGAAAACGTATGGAATTGAGCTGAATTTGGACTCCTATAATACT
GTCTTGAAGGCGTTTTCGGAGTCTGGTTCGTCCAGTTCAGGGTATTCGATTTTGGCTGAA
ATGGGTAGGAAGGGTGTTAAGCCGAATGCGACTAGTTTTGGGATTTTGCTTGCTGGGTTC
TATAACGAAGAGAAGTATGAAGATGTGGGGAAGGTGTTGAAAATGATGGAGGAGTATAAA
ATGCAGCCAGGGATTAGTACTTACAACATTAGGATTCAGAGCTTGTGTAAACTGAAGAAG
TCTTCCGAGGCGAAGGCATTGTTGGATGGCATACTGGCAAGGCGAATGAAGCCCAATTCC
GAAACTTACTGTCATTTGATTCATGGGTTCTGTAAGGAAGGGAATTTGGATGAAGCCAAA
AAGCTGTTTAAGGACATGGTGAATAGGGGTTGTAAACCAGATAGTGACTGCTACTTTACT
TTGGTTTACTTCCTCTGCCAAGGTGGAGATTTCGAATCGGCATTACGGTTTTGTAAGGAG
TGTATGGAGAAGGGTTGGTTTCCAAACATTTCCACCATGACTTCGCTGGTGAATGGCCTT
GTGAGCATTTCAAAGGTCGAAGAAGCTCGGGAGCTTATCGGACAAATCAAGGAGAAATTC
TCAAGGAATGTGGACAAGTGGAATGAAATTGAAGCTGGGTTGCCTCAGTAG

Peptide Sequence

PEP ID

VIT_10s0116g00030.t01
PEP Infomation

pep chromosome:12X:10_random:17537:19181:1 gene:VIT_10s0116g00030 transcript:VIT_10s0116g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAFLSRLRPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAA
LTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGML
NDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNT
VLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYK
MQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAK
KLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGL
VSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ

Transcript Sequence

Transcript ID

VIT_10s0116g00030.t01
Transcript Infomation

cdna chromosome:12X:10_random:17537:19181:1 gene:VIT_10s0116g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAATGGTAGCGCGTCTGACTCCAGATCAGAAGGTTGCGTGTTCGATTCACGTCGGGTTCA
AATCCCTCAACAGATCCATTTTTTTTGTTTTCCGTTTTAAGAAAAACCCTAACATGGAAT
CAATAGTTTCTCTTTCTAAAGCTAAAGCCCTAATCTTTCAATATCATTTCTGTGTTTTTT
CTCTCGAATCCATGGCTTTTCTCTCTCGTCTCCGGCCAATCTCTTCCCACCGTTGCCGCT
TTTTCTCCTCAATCCTCTCTCCCGACTCCGCCACTCCACTCTCCTCCAAGGAGAAATCCA
GAGCCGCTCTCTCCCTCCTCAAATCCGAGCAAGACCCACAGCGCATCCTGGAAATCTGCC
GCGCCGCCGCGCTCACTCCGGAGTCCCACCTCGATCGCGTCGCCTTCTCCGTCGCCATCT
CCAAGCTGGCCGACTCCAAGCACTTCGATTCCATCCGCCACTTCCTCGATGAGCTCAAGG
CCCGCCCCGACCTCCGAACCGAGCGCTTCGTGTCGCACGCCATCGTCCTCTTCGGCCAGG
CCGGGATGCTAAACGACGCCGTTCGGACGTTCGAGCAAATGCACCAGCTGGGTGTCGATC
GTACGGTGAGATCACTCAATGCCCTGCTGTTTTCTTGCATTTTGGCGAAGAATTACAAGG
AGGCGAATAGGATTTTTCTTGAATTCCCGAAAACGTATGGAATTGAGCTGAATTTGGACT
CCTATAATACTGTCTTGAAGGCGTTTTCGGAGTCTGGTTCGTCCAGTTCAGGGTATTCGA
TTTTGGCTGAAATGGGTAGGAAGGGTGTTAAGCCGAATGCGACTAGTTTTGGGATTTTGC
TTGCTGGGTTCTATAACGAAGAGAAGTATGAAGATGTGGGGAAGGTGTTGAAAATGATGG
AGGAGTATAAAATGCAGCCAGGGATTAGTACTTACAACATTAGGATTCAGAGCTTGTGTA
AACTGAAGAAGTCTTCCGAGGCGAAGGCATTGTTGGATGGCATACTGGCAAGGCGAATGA
AGCCCAATTCCGAAACTTACTGTCATTTGATTCATGGGTTCTGTAAGGAAGGGAATTTGG
ATGAAGCCAAAAAGCTGTTTAAGGACATGGTGAATAGGGGTTGTAAACCAGATAGTGACT
GCTACTTTACTTTGGTTTACTTCCTCTGCCAAGGTGGAGATTTCGAATCGGCATTACGGT
TTTGTAAGGAGTGTATGGAGAAGGGTTGGTTTCCAAACATTTCCACCATGACTTCGCTGG
TGAATGGCCTTGTGAGCATTTCAAAGGTCGAAGAAGCTCGGGAGCTTATCGGACAAATCA
AGGAGAAATTCTCAAGGAATGTGGACAAGTGGAATGAAATTGAAGCTGGGTTGCCTCAGT
AGGGAAGGAAAACATGGTATGGATGATTTTGTTAGATAAATCTGAAAATAAAATTGAAAG
CCAGGGGAAAATTTGTGCTGAAAAATGGCATGTCTAGAGGAATTTCTTCCCCCTCGTTTC
ACTTGTTAAATCATTGGGATCTCTTATCATTATATGAGGATGGTGTTTTGGTTTTGAGGG
GTTGGTTTCGAAACTTTTGTCTCATCAGTATTTTTTTCTTCTGGTGAAACATATTGTAGC
TTCTAAATTTTGATGTTGGCTTTTG