Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_10s0071g01150.t01
CDS Infomation	cds chromosome:12X:10:17992462:18022481:-1 gene:VIT_10s0071g01150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p80 WD40 repeat-containing subunit B1 homolog [Source:UniProtKB/TrEMBL;Acc:F6HVX7]
Sequence	ATGACGACCAAACGTGCTTACAAGCTACAGGAATTTGTAGCACACTCTTCCAGTGTAAAC TGTCTCAAGATTGGGAGGAAGTCATCCAGGGTTCTTGTCACCGGTGGAGAAGATCACAAG GTGAATCTTTGGGCCATCGGCAAGCCCAATGCCATACTGAGTTTGTCTGGGCACACGAGT GGAATTGATTCGGTAAGTTTTGACTCTTCAGAGCTGTTGGTGGCTGCAGGAGCGGCAAGC GGCACAATCAAGCTATGGGATTTGGAGGAGGCAAAGATTGTTCGCACGCTTACTGGCCAC AGATCAAATTGCATATCTGTGGACTTCCATCCATTTGGGGAGTTCTTTGCATCTGGCTCT CTGGACACAAATCTTAAGATTTGGGATATCCGAAAGAAGGGGTGTATCCACACTTATAAG GGCCATACACGAGGGGTCAATGCAATCAGATTTACACCAGATGGCCGCTGGGTTGTGTCT GGTGGAGAGGACAACACTGTGAAGCTGTGGGATCTGACTGCTGGAAAGTTGTTGCACGAT TTCAAAAGTCATGAGGGCCAGCTTCAGTGCATAGATTTTCATCCTCATGAATTTCTGCTG GCAACAGGTTCAGCTGATAGAACTGTTAAATTCTGGGACCTTGAAACTTTTGAGTTGATT GGTTCAGCTGGACCTGAGACCGCTGGAGTGCGTTGTATGACTTTCAATCCTGATGGGAAA ACTCTACTCTGTGGGTTGCATGAAAGTCTGAAAGTTTTTTCATGGGAACCAATAAGATGC CATGATGCTGTGGATGTGGGGTGGTCTAGATTATCAGATCTTAACATTCATGAGGGAAAG CTCCTGGGCTGCTCATACAACCAAAGTTGTGTTGGAGTCTGGGTTGTGGATCTCTCGCGC ATAGAGCCATATGCAGTTGGTAATGTGACTCGATTAAATGGTCATTCGGAATCTAAATCT AGTTCAAGTGGGAATTTGTCAGTACTGACAGAAAACACCACAAAGGCTAGTTTGGGCAGG TTATCCATTTCACAAAATACAGAGCTGATTATGAAGGAAACAAAATCTCTGGGAAGGCTG TCTGTCTCTCAAAATTCAGATCCTGTTGACAAGGAGACAAAATGTTTGGCATCCACAGGA AGTGTACCTGGTACTCCTCAAAGGGTCAATTTAAACACTGGTCCAAAAACAACTTTGGCA AGTTCAACAACAGCTCCAAAGAGGATTTCTGCAAAGGCCCATTCAACAGCAAATGTTTCA GCCTTTAATAAATCAGATGTGATACCTGTAATTGTCCCCAGAACTAATGTGAGATTGGAT CAGGCAGCTGAATCCAGAAAGGAAGTTGGTGTTTCTGGAAGAACAATTCCATTCTCTTTG CAGTCAAGAACAAGTGATTTCCGGAAGTCTCCAAATAGAAGAGATGAATTAGAGAGACCA ACTGTTTCTGTCCCATCTGAAAATGCAGGTTCCAAAGCTACTGATCTTAGCACAGTTGCA GATAGGAATATTTTTCCTGCAGTTAAGTGCTCAACTCCAGGAATTTCTGCAGCTGAAAGA AATGTGAAAGATGATAGGTGTATTGGATCTGGCAGGCAAGAAATGAATTCAACGATGGAG CCACCTCCTAACTACCACCACGAAAATTATGAGACACGGGTGCATAGAGCAAACAGAGAT GCATGCTCTATTGAAGTTCAAAAAGGAGGAAGAACCCGTTCGCTTGTTGCTAACTGGGAG AAGAGAGAAATATCTCCTACTTATGAGGGACAGACATCCAGTAATTTCTCTGGGACTGTT TCTGCATCTAACATGCTCCCATTTAGTGCGAGAGGATATACTCCATCTACTGAAAAGGAA GCAGTGCCTGCCAGTGATGAAGATGCTATTACAGATATAATGGAACAACACGGTCAATTT GTTGGCTCTATCCAGTCTCGCTTATCCAAGTTACAGGTAGTCCATAGATTTTGGGAAAGG AATGACATTAAGGGGGCTATTGGTGCGATGGAAAAGATGGCTGATCATTCTGTCTTTGCT GATGTAATCAGCATTTTGAGAGAAAAACCTGATGTTGTGACACTGGAAATTTGCACTTCT CTCCTGCCACTCCTCACGAGTCTTCTTGAAAGTGAGATGGATAGGCATTTAGGCATTTCT CTTGAGATGCTCCTTAAGCTGGTCAGGATATTTGGTTCAGTGATCCATTCAACTTTATCA GCATCATCATCTGTTGGTGTAGATATTCAGGCAGAGCAAAGACTGGAGCGCTGCAATCTC TGCTTTATTGAGCTTGAAAAGATCAAACACTGCCTGCCTGCCCTAACCAGAAGAGGAGGT TCAGTTGCAAAATTGGCGCAGGAGCTGAATCTAGCACTTCTAGAAGTACTATGA

Peptide Sequence

PEP ID	VIT_10s0071g01150.t01
PEP Infomation	pep chromosome:12X:10:17992462:18022481:-1 gene:VIT_10s0071g01150 transcript:VIT_10s0071g01150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p80 WD40 repeat-containing subunit B1 homolog [Source:UniProtKB/TrEMBL;Acc:F6HVX7]
Sequence	MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS GIDSVSFDSSELLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD FKSHEGQLQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETAGVRCMTFNPDGK TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSR IEPYAVGNVTRLNGHSESKSSSSGNLSVLTENTTKASLGRLSISQNTELIMKETKSLGRL SVSQNSDPVDKETKCLASTGSVPGTPQRVNLNTGPKTTLASSTTAPKRISAKAHSTANVS AFNKSDVIPVIVPRTNVRLDQAAESRKEVGVSGRTIPFSLQSRTSDFRKSPNRRDELERP TVSVPSENAGSKATDLSTVADRNIFPAVKCSTPGISAAERNVKDDRCIGSGRQEMNSTME PPPNYHHENYETRVHRANRDACSIEVQKGGRTRSLVANWEKREISPTYEGQTSSNFSGTV SASNMLPFSARGYTPSTEKEAVPASDEDAITDIMEQHGQFVGSIQSRLSKLQVVHRFWER NDIKGAIGAMEKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESEMDRHLGIS LEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCLPALTRRGG SVAKLAQELNLALLEVL

Transcript Sequence

Transcript ID	VIT_10s0071g01150.t01
Transcript Infomation	cdna chromosome:12X:10:17992462:18022481:-1 gene:VIT_10s0071g01150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p80 WD40 repeat-containing subunit B1 homolog [Source:UniProtKB/TrEMBL;Acc:F6HVX7]
Sequence	ATGGTAAGCTGATAATGCGGTTGCCAGGGGAGGAGATGTCGGATGTGGCGTGGGTTTTTG AGATCTGGAGTGTTCCAGATGGAGTAAGATAGAGTGAAGGTGCTGAGAGAATGCTGTTAG GTTTTTGCTTTCGTTTCCTCCTGCAACTGTTTTTCTTCTCATCTCGCTCTACATGACGAC CAAACGTGCTTACAAGCTACAGGAATTTGTAGCACACTCTTCCAGTGTAAACTGTCTCAA GATTGGGAGGAAGTCATCCAGGGTTCTTGTCACCGGTGGAGAAGATCACAAGGTGAATCT TTGGGCCATCGGCAAGCCCAATGCCATACTGAGTTTGTCTGGGCACACGAGTGGAATTGA TTCGGTAAGTTTTGACTCTTCAGAGCTGTTGGTGGCTGCAGGAGCGGCAAGCGGCACAAT CAAGCTATGGGATTTGGAGGAGGCAAAGATTGTTCGCACGCTTACTGGCCACAGATCAAA TTGCATATCTGTGGACTTCCATCCATTTGGGGAGTTCTTTGCATCTGGCTCTCTGGACAC AAATCTTAAGATTTGGGATATCCGAAAGAAGGGGTGTATCCACACTTATAAGGGCCATAC ACGAGGGGTCAATGCAATCAGATTTACACCAGATGGCCGCTGGGTTGTGTCTGGTGGAGA GGACAACACTGTGAAGCTGTGGGATCTGACTGCTGGAAAGTTGTTGCACGATTTCAAAAG TCATGAGGGCCAGCTTCAGTGCATAGATTTTCATCCTCATGAATTTCTGCTGGCAACAGG TTCAGCTGATAGAACTGTTAAATTCTGGGACCTTGAAACTTTTGAGTTGATTGGTTCAGC TGGACCTGAGACCGCTGGAGTGCGTTGTATGACTTTCAATCCTGATGGGAAAACTCTACT CTGTGGGTTGCATGAAAGTCTGAAAGTTTTTTCATGGGAACCAATAAGATGCCATGATGC TGTGGATGTGGGGTGGTCTAGATTATCAGATCTTAACATTCATGAGGGAAAGCTCCTGGG CTGCTCATACAACCAAAGTTGTGTTGGAGTCTGGGTTGTGGATCTCTCGCGCATAGAGCC ATATGCAGTTGGTAATGTGACTCGATTAAATGGTCATTCGGAATCTAAATCTAGTTCAAG TGGGAATTTGTCAGTACTGACAGAAAACACCACAAAGGCTAGTTTGGGCAGGTTATCCAT TTCACAAAATACAGAGCTGATTATGAAGGAAACAAAATCTCTGGGAAGGCTGTCTGTCTC TCAAAATTCAGATCCTGTTGACAAGGAGACAAAATGTTTGGCATCCACAGGAAGTGTACC TGGTACTCCTCAAAGGGTCAATTTAAACACTGGTCCAAAAACAACTTTGGCAAGTTCAAC AACAGCTCCAAAGAGGATTTCTGCAAAGGCCCATTCAACAGCAAATGTTTCAGCCTTTAA TAAATCAGATGTGATACCTGTAATTGTCCCCAGAACTAATGTGAGATTGGATCAGGCAGC TGAATCCAGAAAGGAAGTTGGTGTTTCTGGAAGAACAATTCCATTCTCTTTGCAGTCAAG AACAAGTGATTTCCGGAAGTCTCCAAATAGAAGAGATGAATTAGAGAGACCAACTGTTTC TGTCCCATCTGAAAATGCAGGTTCCAAAGCTACTGATCTTAGCACAGTTGCAGATAGGAA TATTTTTCCTGCAGTTAAGTGCTCAACTCCAGGAATTTCTGCAGCTGAAAGAAATGTGAA AGATGATAGGTGTATTGGATCTGGCAGGCAAGAAATGAATTCAACGATGGAGCCACCTCC TAACTACCACCACGAAAATTATGAGACACGGGTGCATAGAGCAAACAGAGATGCATGCTC TATTGAAGTTCAAAAAGGAGGAAGAACCCGTTCGCTTGTTGCTAACTGGGAGAAGAGAGA AATATCTCCTACTTATGAGGGACAGACATCCAGTAATTTCTCTGGGACTGTTTCTGCATC TAACATGCTCCCATTTAGTGCGAGAGGATATACTCCATCTACTGAAAAGGAAGCAGTGCC TGCCAGTGATGAAGATGCTATTACAGATATAATGGAACAACACGGTCAATTTGTTGGCTC TATCCAGTCTCGCTTATCCAAGTTACAGGTAGTCCATAGATTTTGGGAAAGGAATGACAT TAAGGGGGCTATTGGTGCGATGGAAAAGATGGCTGATCATTCTGTCTTTGCTGATGTAAT CAGCATTTTGAGAGAAAAACCTGATGTTGTGACACTGGAAATTTGCACTTCTCTCCTGCC ACTCCTCACGAGTCTTCTTGAAAGTGAGATGGATAGGCATTTAGGCATTTCTCTTGAGAT GCTCCTTAAGCTGGTCAGGATATTTGGTTCAGTGATCCATTCAACTTTATCAGCATCATC ATCTGTTGGTGTAGATATTCAGGCAGAGCAAAGACTGGAGCGCTGCAATCTCTGCTTTAT TGAGCTTGAAAAGATCAAACACTGCCTGCCTGCCCTAACCAGAAGAGGAGGTTCAGTTGC AAAATTGGCGCAGGAGCTGAATCTAGCACTTCTAGAAGTACTATGAGTGAGTGGTAATTT TTGGGCTTTCCGTGGATTAACTTATGGTGCTTTGAGGAAGTGAGTTTGTGCATTTTCAAG AATTCGGCCCCTCTCCATGCAGCATCTCATTGTGCGGTGTGTGTGATGTTGTTGAACCCC TTGCCCCTGGCCATTTGATGCTGAATGGAGACATTAACTAAACACTAACTCCTACTTCAT TAACTGAAATCCAAAGGCTAATGGACAAGTCCCTCTTTACCTCCTTCAGCTGGTTGCTGC ACAGTTCTGGCAACTAGACTCAGTTTCTGCTTGGCGGAGAAGAATCAAACCACGCCATGT GACACTCTAACCCAATGTCTGGTACATCAATTTGTGACTTTTGGCTTCATGAGTGAAAGA ATGTATCAATTTATAATTTTTTTTTATATATAAATACAAATGCGTGTCAAATGATAGCAG TGCAATATTTGGACTGTCAATTTGTTGGAATTCTGGAAATGAAGCAAATTTATGGTTTCC CAA