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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0071g01020.t01
CDS Infomation

cds chromosome:12X:10:17699892:17707261:1 gene:VIT_10s0071g01020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoyl synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TXX5]
Sequence

ATGATTCAACAAACCCTTCTAAAACCCTCTTATTCTTCAATCTCAAACCCACCTCTCAAA
ACCCCACCAAAATCATCCTCACACTCATCGACCCATTGTTACAATCATACGAGTTGGGGC
TTGCGAATTGTGGGTTCATCATCATCATCATCAAATACCGAATCCAAATCGCTAAATGGG
GCATTCACTGGCAGAGATCCGAACGTGAAGAAGCCGGCGTGGCTGAGGCAGAGAGCGGCG
CAAGGAGAGAGGTTTGAGGAGGTTAAGCAATCACTTTCTCACTTGAATCTCAACACTGTC
TGCCAGGAAGCACAATGCCCCAACATTGGAGAGTGCTGGAATGGAGGCGGGGATGGCATT
GCAACTGCAACAATCATGCTTCTTGGGGATACCTGCACTCGTGGCTGTAGATTTTGTGCT
GTGAAAACCAGTAGAAACCCTGCACCACCTGACCCAATGGAACCAGAAAACACTGCTAAG
GCCATTGCAAGTTGGGGTGTGGATTACATTGTTCTAACAAGTGTTGATCGTGATGATCTG
CCTGATGGTGGAAGTGGCCATTTTGCTCGGACTGTTAAGGCTATGAAGAAATTCAAGCCT
GAGATCATGGTTGAGTGTCTAACTTCTGATTTTCGAGGTGACTTGAGTGCTGTAGAAACT
CTGGTGCACTCAGGGTTAGATGTTTTTGCCCACAATATTGAAACTGTAAAACGGCTTCAG
AGAATTGTGCGAGATCCTCGAGCTGGGTATGAGCAGAGCTTATCAGTTCTAAAACATGCA
AAACATAGCAAGGTGGGGATGATAACAAAATCATCTATAATGTTGGGTCTTGGGGAATCT
GATGATGAGTTGAAGGAAGCCATGGCTGATCTAAGGGCCATAGATGTCGACATTTTGACA
CTTGGACAATATTTACAGCCAACTCCATTACACCTTACTGTCAAAGAGTATGTTACCCCT
GAGAAGTTTGCTTTCTGGAAGGAATATGGGGAGTCAATTGGATTCCGTTATGTTGCTAGT
GGACCCCTGGTTCGATCCTCATACAGGGCTGGGGAGCTCTTTGTTAAGTCCATGGTACGA
GAAAGGGCCAGTGCCAGTGCCACTGCCAGCATAGCTTAG

Peptide Sequence

PEP ID

VIT_10s0071g01020.t01
PEP Infomation

pep chromosome:12X:10:17699892:17707261:1 gene:VIT_10s0071g01020 transcript:VIT_10s0071g01020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoyl synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TXX5]
Sequence

MIQQTLLKPSYSSISNPPLKTPPKSSSHSSTHCYNHTSWGLRIVGSSSSSSNTESKSLNG
AFTGRDPNVKKPAWLRQRAAQGERFEEVKQSLSHLNLNTVCQEAQCPNIGECWNGGGDGI
ATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDL
PDGGSGHFARTVKAMKKFKPEIMVECLTSDFRGDLSAVETLVHSGLDVFAHNIETVKRLQ
RIVRDPRAGYEQSLSVLKHAKHSKVGMITKSSIMLGLGESDDELKEAMADLRAIDVDILT
LGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKSMVR
ERASASATASIA

Transcript Sequence

Transcript ID

VIT_10s0071g01020.t01
Transcript Infomation

cdna chromosome:12X:10:17699892:17707261:1 gene:VIT_10s0071g01020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoyl synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TXX5]
Sequence

AATGCAAACAGCCCACCTACCTCTTTGGTTTTGCTGATCCAAATTCAACTACAATACACA
CCCATTCAGATCCCTTCTCTTCAGTTTTCGATTCATTTCATTGATACCCACGTTATTTTC
AATTCAGAAATCCTCAATTCCACTCGTATTCACGACAGGCAAAACAAGTAGAAAATGATT
CAACAAACCCTTCTAAAACCCTCTTATTCTTCAATCTCAAACCCACCTCTCAAAACCCCA
CCAAAATCATCCTCACACTCATCGACCCATTGTTACAATCATACGAGTTGGGGCTTGCGA
ATTGTGGGTTCATCATCATCATCATCAAATACCGAATCCAAATCGCTAAATGGGGCATTC
ACTGGCAGAGATCCGAACGTGAAGAAGCCGGCGTGGCTGAGGCAGAGAGCGGCGCAAGGA
GAGAGGTTTGAGGAGGTTAAGCAATCACTTTCTCACTTGAATCTCAACACTGTCTGCCAG
GAAGCACAATGCCCCAACATTGGAGAGTGCTGGAATGGAGGCGGGGATGGCATTGCAACT
GCAACAATCATGCTTCTTGGGGATACCTGCACTCGTGGCTGTAGATTTTGTGCTGTGAAA
ACCAGTAGAAACCCTGCACCACCTGACCCAATGGAACCAGAAAACACTGCTAAGGCCATT
GCAAGTTGGGGTGTGGATTACATTGTTCTAACAAGTGTTGATCGTGATGATCTGCCTGAT
GGTGGAAGTGGCCATTTTGCTCGGACTGTTAAGGCTATGAAGAAATTCAAGCCTGAGATC
ATGGTTGAGTGTCTAACTTCTGATTTTCGAGGTGACTTGAGTGCTGTAGAAACTCTGGTG
CACTCAGGGTTAGATGTTTTTGCCCACAATATTGAAACTGTAAAACGGCTTCAGAGAATT
GTGCGAGATCCTCGAGCTGGGTATGAGCAGAGCTTATCAGTTCTAAAACATGCAAAACAT
AGCAAGGTGGGGATGATAACAAAATCATCTATAATGTTGGGTCTTGGGGAATCTGATGAT
GAGTTGAAGGAAGCCATGGCTGATCTAAGGGCCATAGATGTCGACATTTTGACACTTGGA
CAATATTTACAGCCAACTCCATTACACCTTACTGTCAAAGAGTATGTTACCCCTGAGAAG
TTTGCTTTCTGGAAGGAATATGGGGAGTCAATTGGATTCCGTTATGTTGCTAGTGGACCC
CTGGTTCGATCCTCATACAGGGCTGGGGAGCTCTTTGTTAAGTCCATGGTACGAGAAAGG
GCCAGTGCCAGTGCCACTGCCAGCATAGCTTAGCAAGTATTTTGGCCATTGCTTGCAGAC
TGTCCACATGGATGGCTTCTAGGGCAACCAGAGCGCTGATAGGGGCCCTACTTGAAAGAG
GTTTCCATAACTCATTCAAGGATCCAAATTTTGAAGACCCAGCATTCATTTCATTCAGGA
TTATTATTATTATTATTTTATGTATATCAATTCG