Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0071g00890.t01
CDS Infomation

cds chromosome:12X:10:17432817:17439213:1 gene:VIT_10s0071g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTGCATGTTATCAACGCTTAATGATTCCAGGGAAAAAAGGAGGAGGTCAAGAAAT
GTTGGGGAGATTGTTGTGTTTGTTCCCGGATTGAGAACTCCTAAAGCTATGGACTTCTCT
GGACAACTTGGTGATGGGTTGTCTAGGAGTTTGGTGGAGCGCCTATCGGCTCTTAGGACT
AGAATTGTGGTGATGGCTGGCGAAGAAGGATTGGTGCCTGCAAAATCAAGAAGAGTAGCC
ACAAGACATGGAGGCTCGGCCATGGCTGATCTTCAGCAGGCTCTTGAAGATTACCTCCCA
GTTCTGCTGGGACTAGCTCAAAACGCACACCAGCTACAACATAAATTGCAATTTGATTGG
ATAAATCAGGAAGATGACACAGAGGAGACGGCCATGTCAAATTGTTGGTATGAGGTACTC
TCGGTTTTGCACTTGATGGCCATGCTATCCTTATTGCAGGCTAACTTATTGCTTCTTCCC
AAAACACCTGCTGATGGTTACCAGTCAACAGTATCAGAAGAGAGCAGACGAGCTTCCATC
GATATTTTTCTCAAGGCAGCAGGATATTTAGATTTTGCTATCCAACATGTTCTCCCTCAG
TTCCCACCTGAACTCAGGAAAGATCTACCATTGGACCTGGCAGAAGGTGTGTTACGAGCT
CTTTGCCTGCAAGCACTCAGTCAGGGTGTAGATATTCAACTTGGAATGGCAATTGATAGT
GTTAAAGCTACAACAGCAGTAAAGCGAAGGCTCGCATGTGAGATGGTAACATATTGGCAT
CAGGCTCAACAAACCATTACCAACTTTCCACTAGCAAATGAATGGGGGGAAAAGCATAAG
CTTTTTGTCACCTGGAAGTATATTGAATCCAAGGTTGCTGCATACTATTATCATGGTTTA
ATCCTTGAAGAGGGGAACAGTGAAAGATCTCATGCAATGGCTGCAACCGCTCTACAAGCA
GCAGATGAATTTCTCAGAGAAAGCAAGAAGGCCTGTGAGGCCTTCAATGAGGCACCTCCT
TTATCAAGAAATCCACCAGTTTGGGGGACAATTAAATACCTCCTAGAGAAGTTCCCCAAA
GATGCTTCAAGCAAGGTAAAAGAGAAGCAAGATCCATACAGTCATGAAAGGATCATGCAG
ATGGCTCCAGCATTGCCAGAATTTGCATTGTCATTGAAACCTGATGAGTATCGGTTTCCT
CCGGTGGACCCATCGTGGAACAATGAGTTACAGGGATCAAACTTGCCTTCAACCAGGTGA

Peptide Sequence

PEP ID

VIT_10s0071g00890.t01
PEP Infomation

pep chromosome:12X:10:17432817:17439213:1 gene:VIT_10s0071g00890 transcript:VIT_10s0071g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGCMLSTLNDSREKRRRSRNVGEIVVFVPGLRTPKAMDFSGQLGDGLSRSLVERLSALRT
RIVVMAGEEGLVPAKSRRVATRHGGSAMADLQQALEDYLPVLLGLAQNAHQLQHKLQFDW
INQEDDTEETAMSNCWYEVLSVLHLMAMLSLLQANLLLLPKTPADGYQSTVSEESRRASI
DIFLKAAGYLDFAIQHVLPQFPPELRKDLPLDLAEGVLRALCLQALSQGVDIQLGMAIDS
VKATTAVKRRLACEMVTYWHQAQQTITNFPLANEWGEKHKLFVTWKYIESKVAAYYYHGL
ILEEGNSERSHAMAATALQAADEFLRESKKACEAFNEAPPLSRNPPVWGTIKYLLEKFPK
DASSKVKEKQDPYSHERIMQMAPALPEFALSLKPDEYRFPPVDPSWNNELQGSNLPSTR

Transcript Sequence

Transcript ID

VIT_10s0071g00890.t01
Transcript Infomation

cdna chromosome:12X:10:17432817:17439213:1 gene:VIT_10s0071g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTGGTTCAAATAATAATGCAAAGATTTCCATAAAAGTTAAGCAAAAGACACCACACTTT
TCTTGGCATGAGAAACCCAAATACCTGAACAGAAACGAACTGAACAGTTCTGCACAGATT
CAGAGATTTTGTGAGGGCTACCCGCCTTGGAGAACAAGAGATTCAATTTTGATGAGATGG
GGTGCATGTTATCAACGCTTAATGATTCCAGGGAAAAAAGGAGGAGGTCAAGAAATGTTG
GGGAGATTGTTGTGTTTGTTCCCGGATTGAGAACTCCTAAAGCTATGGACTTCTCTGGAC
AACTTGGTGATGGGTTGTCTAGGAGTTTGGTGGAGCGCCTATCGGCTCTTAGGACTAGAA
TTGTGGTGATGGCTGGCGAAGAAGGATTGGTGCCTGCAAAATCAAGAAGAGTAGCCACAA
GACATGGAGGCTCGGCCATGGCTGATCTTCAGCAGGCTCTTGAAGATTACCTCCCAGTTC
TGCTGGGACTAGCTCAAAACGCACACCAGCTACAACATAAATTGCAATTTGATTGGATAA
ATCAGGAAGATGACACAGAGGAGACGGCCATGTCAAATTGTTGGTATGAGGTACTCTCGG
TTTTGCACTTGATGGCCATGCTATCCTTATTGCAGGCTAACTTATTGCTTCTTCCCAAAA
CACCTGCTGATGGTTACCAGTCAACAGTATCAGAAGAGAGCAGACGAGCTTCCATCGATA
TTTTTCTCAAGGCAGCAGGATATTTAGATTTTGCTATCCAACATGTTCTCCCTCAGTTCC
CACCTGAACTCAGGAAAGATCTACCATTGGACCTGGCAGAAGGTGTGTTACGAGCTCTTT
GCCTGCAAGCACTCAGTCAGGGTGTAGATATTCAACTTGGAATGGCAATTGATAGTGTTA
AAGCTACAACAGCAGTAAAGCGAAGGCTCGCATGTGAGATGGTAACATATTGGCATCAGG
CTCAACAAACCATTACCAACTTTCCACTAGCAAATGAATGGGGGGAAAAGCATAAGCTTT
TTGTCACCTGGAAGTATATTGAATCCAAGGTTGCTGCATACTATTATCATGGTTTAATCC
TTGAAGAGGGGAACAGTGAAAGATCTCATGCAATGGCTGCAACCGCTCTACAAGCAGCAG
ATGAATTTCTCAGAGAAAGCAAGAAGGCCTGTGAGGCCTTCAATGAGGCACCTCCTTTAT
CAAGAAATCCACCAGTTTGGGGGACAATTAAATACCTCCTAGAGAAGTTCCCCAAAGATG
CTTCAAGCAAGGTAAAAGAGAAGCAAGATCCATACAGTCATGAAAGGATCATGCAGATGG
CTCCAGCATTGCCAGAATTTGCATTGTCATTGAAACCTGATGAGTATCGGTTTCCTCCGG
TGGACCCATCGTGGAACAATGAGTTACAGGGATCAAACTTGCCTTCAACCAGGTGACAAG
GCATACAGCAACTCAGACACGTCAAGAGAAAAGCCTAGCTGGTTGCCTTCGGCGATCAGG
AGCCATTTTTTCATCCTACCCTTATAGATAACTAGTCTGGGTATATCAGCAGACCGTATG
AAAAATGCCTCCTAAAAGAAATCGTTAAATGTTCATTTTCTTGGGTCCCCAATTTCTACT
AATTTTCCTAGTTATCAATTCTTCTTCACTTCAG