Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_10s0042g01130.t01
CDS Infomation	cds chromosome:12X:10:15017635:15022540:1 gene:VIT_10s0042g01130 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HIT2]
Sequence	ATGGAGGATCAGATATTTTTCGGTGATGTGTCTGCAAGGAATTTTGTTAGGGAGGTGAAA TTGGAAGAGGATGAGGAGGATTTCCGGAGCTGTTGCGAAGATGAAGAAGAATGGAAGGAT ACTGAAGAATCAGTGAAGGAAGGTGCAAAGGATTTGAAGGAGGAACTCGATGAATTTTCA GTGAAGATGTTCTTCAAGGGCATGTCAATAGCTGAGGCTGGTGATTCTGGTTCTGGGCTT TCTGGAATAGGGGTGGTCATGGAAAGATCAGCCAGCGCTCCTACAATACAAGTGCAGAAA AAACTTGACTTTTATGTGGATGAATCCGTGGCTGACTATTTGGCTTTGATGGATGGTCTG ATAGAGGCCATGCAGAATAACATTCGCCGTGTTTTTGCATTTACTGATTCCGAGATCTTA TATGACCAGATTTCACATGCGGAGGAGGATGGGAATCCACTTTTGATGGCACTGAAGCAA AGGATCTTAGAATTTTCCAGTAATCTGGAAGCTTTTGTTCTGAATCTAATTCCCAGTAAT GATCTTGAGAGGCCATTGCAATTAGCCCAAGTGGCAATTGGGATTGTTTCTTCACCTTCC AAGGGAGATGGATCACTGGAAAACTGTTCTATCTGTTGTGAGGACAAACCTTCGCCAATG ATGATCACAATGAAATGTTCACACAAATTCTGTTCCCACTGCATGAAAACCTATGTTGAT GGAAAAGTACAGTCCTCTCAGGTCCCCATTAGATGTCCTCAGTTGAGATGTAAATATTTC ATCTCTACTACTGAGTGCAGATCTTTTCTTCCAGTCACTTGCTTTGAATCTTTGGAGAGA GCACTTGCAGAAGCAAATGTTCTCAATTCGGAGAAAATCTACTGCCCCTTTCCAAATTGT TCAGTCTTGCTTGATCCACGAGAGTGTTTGTCAGCTAGGGCAAGTTCATCAAGTCAGTCA GATAACAGTTGTGTTGAGTGCCCAGTTTGTCAGAGATTTATCTGTGTTGATTGTGGAGTT CCTTGGCATTCTTCAATGAGCTGTGAAGAGTATCAAAGTCTCCCCTTGGAGGAAAGAGAT GCTGGGGACATTACTTTACATCGCCTTGCACAAAATAAAAGGTGGAGGCGTTGCCAGCAA TGCCGGAGGATGATTGAGCTCACACAAGGGTGCTATCACATGACCTGCTGGTGTGGGCAT GAGTTCTGCTATTCTTGTGGTGCGGAGTACAGAGACGGACAACAGACCTGTCAATGTGCA TTTTGGGACGAAGAGAACTCTGAAGACTTGATGAGCCACTCGATCCAAGAATCTGAACAA TGGGAATGGGACTCCTTCAATTCACTTCCCATGACCATGGGCATGGACGCATACTCAGAT CAGGAGAGATCTCAGCTGGCACTGATCCAGAGGTTCCTTGCTGGGGGTTTCAGTCTGAGC GACCATCACCCATACCAATCCCCACCACGTTGTACAGACTCGTATGTTGATGCCATGAAG GACCTCCATCAGCTTCCTTGGCTGGAGAGGTTTGTGTCAGTAATAAGTGACAACTACTAT GAAGACTATATCCAATGA

Peptide Sequence

PEP ID	VIT_10s0042g01130.t01
PEP Infomation	pep chromosome:12X:10:15017635:15022540:1 gene:VIT_10s0042g01130 transcript:VIT_10s0042g01130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HIT2]
Sequence	MEDQIFFGDVSARNFVREVKLEEDEEDFRSCCEDEEEWKDTEESVKEGAKDLKEELDEFS VKMFFKGMSIAEAGDSGSGLSGIGVVMERSASAPTIQVQKKLDFYVDESVADYLALMDGL IEAMQNNIRRVFAFTDSEILYDQISHAEEDGNPLLMALKQRILEFSSNLEAFVLNLIPSN DLERPLQLAQVAIGIVSSPSKGDGSLENCSICCEDKPSPMMITMKCSHKFCSHCMKTYVD GKVQSSQVPIRCPQLRCKYFISTTECRSFLPVTCFESLERALAEANVLNSEKIYCPFPNC SVLLDPRECLSARASSSSQSDNSCVECPVCQRFICVDCGVPWHSSMSCEEYQSLPLEERD AGDITLHRLAQNKRWRRCQQCRRMIELTQGCYHMTCWCGHEFCYSCGAEYRDGQQTCQCA FWDEENSEDLMSHSIQESEQWEWDSFNSLPMTMGMDAYSDQERSQLALIQRFLAGGFSLS DHHPYQSPPRCTDSYVDAMKDLHQLPWLERFVSVISDNYYEDYIQ

Transcript Sequence

Transcript ID	VIT_10s0042g01130.t01
Transcript Infomation	cdna chromosome:12X:10:15017635:15022540:1 gene:VIT_10s0042g01130 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HIT2]
Sequence	CTGAAATTTGGCATTTCTGGGATTGATTTGTCGGTGGGTTCTTCTTAGATTTTGATATGG AGATAGGGGCTGAAAGATCACTGTTTGGGTATTGGTATTTTCTTGTGATTTTGGGTTAGC TGTAGGGTTAATTTTGGAGGCTTGGATCAAATTGTCAGTGCGTTTTGCGTTGATTTTCGT TTAGAAGAATGGGCTGGAAGATCACTTTTTTTTCATATCAATCTTTGTGATTTTGGGAAA AGATTCTGGTGAAATTCAGAGTTTTGGATCCCTTCGTCTAAGTTTTGTTTAGAATTTGAC ATCGATCACCCCTTGGGATATTAGAGTAGCATAAGTTTGTGGGTTCTTGGAGAAATTGGG GTTGAAAATGGAGGATCAGATATTTTTCGGTGATGTGTCTGCAAGGAATTTTGTTAGGGA GGTGAAATTGGAAGAGGATGAGGAGGATTTCCGGAGCTGTTGCGAAGATGAAGAAGAATG GAAGGATACTGAAGAATCAGTGAAGGAAGGTGCAAAGGATTTGAAGGAGGAACTCGATGA ATTTTCAGTGAAGATGTTCTTCAAGGGCATGTCAATAGCTGAGGCTGGTGATTCTGGTTC TGGGCTTTCTGGAATAGGGGTGGTCATGGAAAGATCAGCCAGCGCTCCTACAATACAAGT GCAGAAAAAACTTGACTTTTATGTGGATGAATCCGTGGCTGACTATTTGGCTTTGATGGA TGGTCTGATAGAGGCCATGCAGAATAACATTCGCCGTGTTTTTGCATTTACTGATTCCGA GATCTTATATGACCAGATTTCACATGCGGAGGAGGATGGGAATCCACTTTTGATGGCACT GAAGCAAAGGATCTTAGAATTTTCCAGTAATCTGGAAGCTTTTGTTCTGAATCTAATTCC CAGTAATGATCTTGAGAGGCCATTGCAATTAGCCCAAGTGGCAATTGGGATTGTTTCTTC ACCTTCCAAGGGAGATGGATCACTGGAAAACTGTTCTATCTGTTGTGAGGACAAACCTTC GCCAATGATGATCACAATGAAATGTTCACACAAATTCTGTTCCCACTGCATGAAAACCTA TGTTGATGGAAAAGTACAGTCCTCTCAGGTCCCCATTAGATGTCCTCAGTTGAGATGTAA ATATTTCATCTCTACTACTGAGTGCAGATCTTTTCTTCCAGTCACTTGCTTTGAATCTTT GGAGAGAGCACTTGCAGAAGCAAATGTTCTCAATTCGGAGAAAATCTACTGCCCCTTTCC AAATTGTTCAGTCTTGCTTGATCCACGAGAGTGTTTGTCAGCTAGGGCAAGTTCATCAAG TCAGTCAGATAACAGTTGTGTTGAGTGCCCAGTTTGTCAGAGATTTATCTGTGTTGATTG TGGAGTTCCTTGGCATTCTTCAATGAGCTGTGAAGAGTATCAAAGTCTCCCCTTGGAGGA AAGAGATGCTGGGGACATTACTTTACATCGCCTTGCACAAAATAAAAGGTGGAGGCGTTG CCAGCAATGCCGGAGGATGATTGAGCTCACACAAGGGTGCTATCACATGACCTGCTGGTG TGGGCATGAGTTCTGCTATTCTTGTGGTGCGGAGTACAGAGACGGACAACAGACCTGTCA ATGTGCATTTTGGGACGAAGAGAACTCTGAAGACTTGATGAGCCACTCGATCCAAGAATC TGAACAATGGGAATGGGACTCCTTCAATTCACTTCCCATGACCATGGGCATGGACGCATA CTCAGATCAGGAGAGATCTCAGCTGGCACTGATCCAGAGGTTCCTTGCTGGGGGTTTCAG TCTGAGCGACCATCACCCATACCAATCCCCACCACGTTGTACAGACTCGTATGTTGATGC CATGAAGGACCTCCATCAGCTTCCTTGGCTGGAGAGGTTTGTGTCAGTAATAAGTGACAA CTACTATGAAGACTATATCCAATGAATGAGGCGGATGTAGCAAGAGTCTGTCGCATGTTC CAAAATTTCTGGAAAATAAGTTGCATTAGGCTTCACAAGGGGAGGTAAAGAGTTCCTCAC TCTCTTAACTCTCTTTTCATTTACACCGCTCCTCCTTTCTTCTTTCTTCTTCTGTAGTCT TCCTGGATCAATTTCGGTCAGTGACTCTTAAACTTCCATGCATATGGTGATGGATAGGAA AAGAATATGTTTTTATTGTAGAAAGAAACAGGTAGCTGAAGACACAAAAGAAACGGAATT AGACCCCTACAACAAAGTTAATGAAACAGATTATATGCTCATTTCCTTT