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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0042g00950.t01
CDS Infomation

cds chromosome:12X:10:14421697:14445044:-1 gene:VIT_10s0042g00950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [Source:UniProtKB/TrEMBL;Acc:D7TEX3]
Sequence

ATGGTTGGACAAGTCAGAAGGCTGATCCCATATGTGGTTTCCAGAATCAAATCACCACTC
GCTCCTCCGTCTCGCCATCTGGGCACAACTGCTCCTCCAGCTGTCTTCGTTGACAAGAAC
ACGCGCGTCATCTGCCAAGGCATCACCGGCAAGAATGGCACCTTCCACACTGAACAGGCC
ATCGAGTATGGCACCAAAATGGTTGGTGGGGTGACACCAAAGAAGGGTGGAATGGAGCAC
TTGGGATTGCCTATTTTCAACACTGTTGCAGAAGCCAAGGCTGAAACAAGGGCAAATGCA
TCAGTGATCTATGTTCCGCCACCATTTGCAGCTGCAGCTATCATGGAGGCAGTGGAAGCT
GAACTGGATCTTGTTGTGTGCATAACAGAAGGAATTCCTCAGCATGACATGGTTAAGGTG
AAGGCTGCTCTTAACAGGCAATCAAAGACCCGACTGATTGGTCCAAACTGCCCTGGTATT
ATCAAGCCTGGAGAATGCAAAATTGGAATTATGCCTGGGTACATTCACAAACCAGGGCGT
GTAGGAATTGTTTCTCGATCTGGTACACTGACATATGAAGCAGTTTTCCAAACAACTGCA
GTTGGTCTGGGGCAATCTACTTGTGTAGGAATTGGTGGGGATCCTTTCAATGGGACGAAC
TTTGTTGACTGCGTGAAGAAATTCCTTGCTGATCCTCAAACAGAAGGTATCATTCTTATA
GGTGAGATAGGTGGCACTGCAGAGGAGGATGCTGCTGCTCTAATAAAGGAAAGTGGGACT
GAAAAGCCTGTTGTTGCTTTTATTGCTGGACTGACTGCCCCACCTGGCCGACGTATGGGT
CATGCTGGAGCTATAGTATCAGGGGGAAAGGGTACAGCTCAAGACAAAATCAAGACTTTG
AGAGATGTTGGGGCAACCGTGGTTGAGTCTCCAGCAAAAATTGGCGTTGCCATGCTTGAC
GTCTTTAAACAGAGGGGCCTTGTGAGTTAG

Peptide Sequence

PEP ID

VIT_10s0042g00950.t01
PEP Infomation

pep chromosome:12X:10:14421697:14445044:-1 gene:VIT_10s0042g00950 transcript:VIT_10s0042g00950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [Source:UniProtKB/TrEMBL;Acc:D7TEX3]
Sequence

MVGQVRRLIPYVVSRIKSPLAPPSRHLGTTAPPAVFVDKNTRVICQGITGKNGTFHTEQA
IEYGTKMVGGVTPKKGGMEHLGLPIFNTVAEAKAETRANASVIYVPPPFAAAAIMEAVEA
ELDLVVCITEGIPQHDMVKVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGR
VGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVKKFLADPQTEGIILI
GEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTL
RDVGATVVESPAKIGVAMLDVFKQRGLVS

Transcript Sequence

Transcript ID

VIT_10s0042g00950.t01
Transcript Infomation

cdna chromosome:12X:10:14421697:14445044:-1 gene:VIT_10s0042g00950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [Source:UniProtKB/TrEMBL;Acc:D7TEX3]
Sequence

TTTCGCCCCAGTCGTCTCCTCTTCCCCCGATATTCTCTTCCCTGTGCTTAGAACTTTTTG
ATTTGGATCTTCAACAACCCATTCGCAGAAATGGTTGGACAAGTCAGAAGGCTGATCCCA
TATGTGGTTTCCAGAATCAAATCACCACTCGCTCCTCCGTCTCGCCATCTGGGCACAACT
GCTCCTCCAGCTGTCTTCGTTGACAAGAACACGCGCGTCATCTGCCAAGGCATCACCGGC
AAGAATGGCACCTTCCACACTGAACAGGCCATCGAGTATGGCACCAAAATGGTTGGTGGG
GTGACACCAAAGAAGGGTGGAATGGAGCACTTGGGATTGCCTATTTTCAACACTGTTGCA
GAAGCCAAGGCTGAAACAAGGGCAAATGCATCAGTGATCTATGTTCCGCCACCATTTGCA
GCTGCAGCTATCATGGAGGCAGTGGAAGCTGAACTGGATCTTGTTGTGTGCATAACAGAA
GGAATTCCTCAGCATGACATGGTTAAGGTGAAGGCTGCTCTTAACAGGCAATCAAAGACC
CGACTGATTGGTCCAAACTGCCCTGGTATTATCAAGCCTGGAGAATGCAAAATTGGAATT
ATGCCTGGGTACATTCACAAACCAGGGCGTGTAGGAATTGTTTCTCGATCTGGTACACTG
ACATATGAAGCAGTTTTCCAAACAACTGCAGTTGGTCTGGGGCAATCTACTTGTGTAGGA
ATTGGTGGGGATCCTTTCAATGGGACGAACTTTGTTGACTGCGTGAAGAAATTCCTTGCT
GATCCTCAAACAGAAGGTATCATTCTTATAGGTGAGATAGGTGGCACTGCAGAGGAGGAT
GCTGCTGCTCTAATAAAGGAAAGTGGGACTGAAAAGCCTGTTGTTGCTTTTATTGCTGGA
CTGACTGCCCCACCTGGCCGACGTATGGGTCATGCTGGAGCTATAGTATCAGGGGGAAAG
GGTACAGCTCAAGACAAAATCAAGACTTTGAGAGATGTTGGGGCAACCGTGGTTGAGTCT
CCAGCAAAAATTGGCGTTGCCATGCTTGACGTCTTTAAACAGAGGGGCCTTGTGAGTTAG
TTTTCGCCTGATATCTTTAATTCTTCTTTTTTCCGTTCTCATTTTCTTCTCAAAGTTGAT
AAATGCCTCAGCCAATCTTTTAGAGGCAGTTGAACTCATCTTTGGCATTCAATGGTAGAA
ATATTTTCGTGGTTCTCCATGCTTGACCTGGAAAAATGTCCGGGAAGATTCTTTTTCAGT
CTTTTCCATCACATGGTGATTTGCATGTTTCATTGAAATTCTTGGTTATTGAAGTTTCAA
TGTTTCATGTCGCCATAACGCGTAAAGCAAAACTTTTGTACTAGATGCTTTATTTTAAAT
AGTTTGCAACTGAAGATATAGGATCCA