Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0042g00140.t01
CDS Infomation

cds chromosome:12X:10:12874830:12899433:-1 gene:VIT_10s0042g00140 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydroorotate dehydrogenase (quinone), mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6HIN2]
Sequence

ATGGCGGTTAGGGTTTCGAGCAAAATATGGAGAGATTATCTGTATAATAAGGTGAAATCG
GGCGGTTTTGGAGCCACCCGGCACTGGTCTTCTGCTGCCCAAACTCCTACCGCTCCTCCG
CCCAAGAAGATCCCCCATTCTTCCAAGAAAGGGAGGTTATTCACAGGAGCTGCTATTGGC
CTACTCATAGCAGGAGGAGCTTATGTGAGTACCGTGGATGAAGCAACTTTCTGTGGCTGG
CTTTTCTCGGCAACAAAACTTGTGAATCCTTTCTTTGCCCTTCTGGATGCAGAAGTTGCT
CACAGGCTAGCTGTCTCAGCTGCTGCTCGTGGTTTGGTTCCTAGAGAGAAAAGGCCTGAT
CCATCAATATTGGGACTGGAAGTTTGGGGAAGAAAGTTCTCCAACCCTGTAGGCCTTGCT
GCAGGTTTTGATAAAAATGCTGAGGCTGTGGAAGGGTTACTTGGGTTAGGTTTTGGCTTT
GTAGAGGTTGGTTCTGTTACCCCTGTTCCACAGGAGGGTAATCCAAAGCCTCGTATATTC
AGACTGCGTCATGAAGGTGCTATCATAAACCGCTGTGGCTTCAACAGTGAAGGAATTTTT
GCTGTTGCAAAACGATTGGGTATTCAGCATGGTAAGAGGAAGTTGGCTGAAACTTCAAGC
ACTTCATCTTCCTCCAAGGATGAAGTCAAACATGGAGGAAAAGCTGGTCCTGGCATTCTT
GGGGTCAACCTTGGAAAGAATAAGACAAGTGAAGATGCTGCTGCAGATTATGTACAAGGG
GTTCATTCATTATCCCAGTATGCTGATTACTTGGTTATCAATGTTTCATCACCCAATACC
CCTGGATTGCGGAAGCTTCAGGGAAGAAAACAATTGAAGGACCTGGTTAAGAAGGTTCAA
GGTGCTCGTGATGAAATGCAATGGGGTGAGGAGGGCCCACCTCCATTGCTTGTGAAAATT
GCTCCAGACTTGTCTAAAGAGGACCTTGAAGATATTGCGGCGGTTTCTCTTGCTCTTCGC
TTGGATGGATTGATCATATCCAATACCACCATTTCAAGACCAGATTCTGTCAGGCAAAAC
CCTGTGGCTGAGGAATCAGGTGGCTTAAGTGGAAAGCCTCTCTTTAATCTCTCAACCAAT
ATGTTGAAGGAGATGTATGTTTTGACGCGGGGAAGAATACCTTTAATAGGCTGTGGGGGC
ATTAGCAGTGGTGAAGATGCATATAAAAAAATACGAGCAGGAGCAACTCTTGTTCAGCTT
TATACACAGTTTGCTTATGAGGGTCCTGCCCTTATTCCTCAAATAAAGATGACTTTCAGC
TTTGTGCATTATCTATGA

Peptide Sequence

PEP ID

VIT_10s0042g00140.t01
PEP Infomation

pep chromosome:12X:10:12874830:12899433:-1 gene:VIT_10s0042g00140 transcript:VIT_10s0042g00140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydroorotate dehydrogenase (quinone), mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6HIN2]
Sequence

MAVRVSSKIWRDYLYNKVKSGGFGATRHWSSAAQTPTAPPPKKIPHSSKKGRLFTGAAIG
LLIAGGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHRLAVSAAARGLVPREKRPD
PSILGLEVWGRKFSNPVGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPRIF
RLRHEGAIINRCGFNSEGIFAVAKRLGIQHGKRKLAETSSTSSSSKDEVKHGGKAGPGIL
GVNLGKNKTSEDAAADYVQGVHSLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQ
GARDEMQWGEEGPPPLLVKIAPDLSKEDLEDIAAVSLALRLDGLIISNTTISRPDSVRQN
PVAEESGGLSGKPLFNLSTNMLKEMYVLTRGRIPLIGCGGISSGEDAYKKIRAGATLVQL
YTQFAYEGPALIPQIKMTFSFVHYL

Transcript Sequence

Transcript ID

VIT_10s0042g00140.t01
Transcript Infomation

cdna chromosome:12X:10:12874830:12899433:-1 gene:VIT_10s0042g00140 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydroorotate dehydrogenase (quinone), mitochondrial [Source:UniProtKB/TrEMBL;Acc:F6HIN2]
Sequence

GGCTCGCCTACACCTCCCACTCACTCTCGCTCCCTCTCTCCCTTTCTCTTGGGTCTGGAG
AATCTCTGCTTTTCCTAAAAAGCCTAAAACCTCTCCTCACCTCTCTTTCTGTCTCCCGAG
TCATCGGAGAACCTATCTCCTATCTCTCTCTTCTTTTTTTGCTTGATATTTAATAAAAAT
TGAAACTTTTTGGAGAATTTGGTGAGTTTTTGGGAAGGTTTCTATTGGGTTAACAGAAGG
AAAAAGGGAGGGAGCTTTGATGGCGGTTAGGGTTTCGAGCAAAATATGGAGAGATTATCT
GTATAATAAGGTGAAATCGGGCGGTTTTGGAGCCACCCGGCACTGGTCTTCTGCTGCCCA
AACTCCTACCGCTCCTCCGCCCAAGAAGATCCCCCATTCTTCCAAGAAAGGGAGGTTATT
CACAGGAGCTGCTATTGGCCTACTCATAGCAGGAGGAGCTTATGTGAGTACCGTGGATGA
AGCAACTTTCTGTGGCTGGCTTTTCTCGGCAACAAAACTTGTGAATCCTTTCTTTGCCCT
TCTGGATGCAGAAGTTGCTCACAGGCTAGCTGTCTCAGCTGCTGCTCGTGGTTTGGTTCC
TAGAGAGAAAAGGCCTGATCCATCAATATTGGGACTGGAAGTTTGGGGAAGAAAGTTCTC
CAACCCTGTAGGCCTTGCTGCAGGTTTTGATAAAAATGCTGAGGCTGTGGAAGGGTTACT
TGGGTTAGGTTTTGGCTTTGTAGAGGTTGGTTCTGTTACCCCTGTTCCACAGGAGGGTAA
TCCAAAGCCTCGTATATTCAGACTGCGTCATGAAGGTGCTATCATAAACCGCTGTGGCTT
CAACAGTGAAGGAATTTTTGCTGTTGCAAAACGATTGGGTATTCAGCATGGTAAGAGGAA
GTTGGCTGAAACTTCAAGCACTTCATCTTCCTCCAAGGATGAAGTCAAACATGGAGGAAA
AGCTGGTCCTGGCATTCTTGGGGTCAACCTTGGAAAGAATAAGACAAGTGAAGATGCTGC
TGCAGATTATGTACAAGGGGTTCATTCATTATCCCAGTATGCTGATTACTTGGTTATCAA
TGTTTCATCACCCAATACCCCTGGATTGCGGAAGCTTCAGGGAAGAAAACAATTGAAGGA
CCTGGTTAAGAAGGTTCAAGGTGCTCGTGATGAAATGCAATGGGGTGAGGAGGGCCCACC
TCCATTGCTTGTGAAAATTGCTCCAGACTTGTCTAAAGAGGACCTTGAAGATATTGCGGC
GGTTTCTCTTGCTCTTCGCTTGGATGGATTGATCATATCCAATACCACCATTTCAAGACC
AGATTCTGTCAGGCAAAACCCTGTGGCTGAGGAATCAGGTGGCTTAAGTGGAAAGCCTCT
CTTTAATCTCTCAACCAATATGTTGAAGGAGATGTATGTTTTGACGCGGGGAAGAATACC
TTTAATAGGCTGTGGGGGCATTAGCAGTGGTGAAGATGCATATAAAAAAATACGAGCAGG
AGCAACTCTTGTTCAGCTTTATACACAGTTTGCTTATGAGGGTCCTGCCCTTATTCCTCA
AATAAAGATGACTTTCAGCTTTGTGCATTATCTATGA