Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05630.t01
CDS Infomation

cds chromosome:12X:10:10471996:10480736:1 gene:VIT_10s0003g05630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit epsilon [Source:UniProtKB/TrEMBL;Acc:D7TKQ8]
Sequence

ATGGCAGCACCAGACCTTTTGTTCGGTCTCAGAAACAACTTTTTCTTGGGAGCTTTCCAA
GCCGCCATCAACAACAGCGACATCCCAAATCTCTCTCCTGAGGATTCAATTGAGAGGGAC
TGCCTCGTTCACAGATCCTACATTGCCCTCGGCAGCTACCAGCTTGTCATCAACGAGATC
GATTCCTCCGCCGCCACGCCTCTCCAGGCCGTGAAATTGCTCGCGCTATATCTCTCGAGT
CCCGAAAATAAGGAATCCACGATTTCAAGTCTGAAGGAGTTGTTGGGAGATCCGGCCATT
GGTAACAACCCGATTCTGAGGTTGATTGCTGGGATCGTCTTCATGCATGAGCAAGACTAT
AATGAAGCTCTTAAACATACCCATCCTGGAGGAACTATGGAACTGCATGCATTAAATGTC
CAAATATTCCTTAAGATGCACAGGTCTGATTATGCAGAGAAACAACTAAAGATAATGCAG
CAGATGGATGAAGATCACACCCTTACTCAACTTGCAAATGCATGGCTAAACTTGGCAGTG
GGTGGTTCCAAGATACAGGAAGCATATCTAATCTTCCAAGATTTCTCTGAGAAGTATCAG
ATGACAGGGTTGATCCTTAATGGCAAGGCTGTTTGCTGCATGCACATGGGACACTTTGAT
GAAGCTGAATCACTGTTGCTTGAAGCACTAAACAAGGATGCAAAAGATCCAGAAACCCTA
GCCAATCTGGTTGTGTGCAGTCTTCACCTTGGTAAACAATCTTCTCGTTACCTCAGCCAG
CTGAAACTCTCACATCCAGACCATGTGCTTGTCACACGGGCATCAGCTGCGGAAGAGGCC
TTTGACAGAGCAGTTCAAACAATTGCCTGA

Peptide Sequence

PEP ID

VIT_10s0003g05630.t01
PEP Infomation

pep chromosome:12X:10:10471996:10480736:1 gene:VIT_10s0003g05630 transcript:VIT_10s0003g05630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit epsilon [Source:UniProtKB/TrEMBL;Acc:D7TKQ8]
Sequence

MAAPDLLFGLRNNFFLGAFQAAINNSDIPNLSPEDSIERDCLVHRSYIALGSYQLVINEI
DSSAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDY
NEALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAV
GGSKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETL
ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA

Transcript Sequence

Transcript ID

VIT_10s0003g05630.t01
Transcript Infomation

cdna chromosome:12X:10:10471996:10480736:1 gene:VIT_10s0003g05630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit epsilon [Source:UniProtKB/TrEMBL;Acc:D7TKQ8]
Sequence

AAGAAAGAAGAGAGGAGAAAACTCGAGATCCGCATCCAAGCGAGAAGCAAGCATGGCAGC
ACCAGACCTTTTGTTCGGTCTCAGAAACAACTTTTTCTTGGGAGCTTTCCAAGCCGCCAT
CAACAACAGCGACATCCCAAATCTCTCTCCTGAGGATTCAATTGAGAGGGACTGCCTCGT
TCACAGATCCTACATTGCCCTCGGCAGCTACCAGCTTGTCATCAACGAGATCGATTCCTC
CGCCGCCACGCCTCTCCAGGCCGTGAAATTGCTCGCGCTATATCTCTCGAGTCCCGAAAA
TAAGGAATCCACGATTTCAAGTCTGAAGGAGTTGTTGGGAGATCCGGCCATTGGTAACAA
CCCGATTCTGAGGTTGATTGCTGGGATCGTCTTCATGCATGAGCAAGACTATAATGAAGC
TCTTAAACATACCCATCCTGGAGGAACTATGGAACTGCATGCATTAAATGTCCAAATATT
CCTTAAGATGCACAGGTCTGATTATGCAGAGAAACAACTAAAGATAATGCAGCAGATGGA
TGAAGATCACACCCTTACTCAACTTGCAAATGCATGGCTAAACTTGGCAGTGGGTGGTTC
CAAGATACAGGAAGCATATCTAATCTTCCAAGATTTCTCTGAGAAGTATCAGATGACAGG
GTTGATCCTTAATGGCAAGGCTGTTTGCTGCATGCACATGGGACACTTTGATGAAGCTGA
ATCACTGTTGCTTGAAGCACTAAACAAGGATGCAAAAGATCCAGAAACCCTAGCCAATCT
GGTTGTGTGCAGTCTTCACCTTGGTAAACAATCTTCTCGTTACCTCAGCCAGCTGAAACT
CTCACATCCAGACCATGTGCTTGTCACACGGGCATCAGCTGCGGAAGAGGCCTTTGACAG
AGCAGTTCAAACAATTGCCTGAAGACTGGATCAGTTGATTCTGTGCAGAGAGGGTGAACT
GTGTTTGTTAGTGTTAGCATATAGTTCTTTTCTCCTTGACGAGGGTCTTTCGGTTTTGTA
ACCTACAAGAGTTAGACAAGTTGAATGGCAAAAAGGTGTCTGATCAGAGTGCAAATTATT
TTACTAGTGAACGTTGTGATGAGCTGCTTTTTATGATAAGGGCACATGTTATCAAGTATT
TCAATTTCTTATGTGTTTGGTGGAAATGAATACTAATAAACCCATTTTACATT