Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05620.t01
CDS Infomation

cds chromosome:12X:10:10435804:10437415:-1 gene:VIT_10s0003g05620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCATCTTTTTGCTCTCTCTT
TCATGGGCAGCTTCGGATTCTGTTCATGGAGCTTTTCTTCAATGCCTTTCTACCCATTCT
CAGTCTTCTCATCCCATCTCTGCAGTACTATACACTCCTGATAACTCTTCATATTCGTCT
GTTTTAGAGTCATACATTAGAAACCTCCGATTCAATACATCTACAACCCCTAAACCGCGC
CTTATCATCACCGCCACCCATGAGTCGCACATAAAAGCTGCCCTTATTTGCTCTAAGAAG
CATGGCTTGCAGATGAAAATTCGAAGCGGTGGCCATGACTACGAGGGCGTGTCTTATGTA
TCCGATGTCCCATTCTTCATCCTTGATATGTTCAATCTTCGATCCATTAGTGTGGATATA
GAAGATGAGAGTGCTTGGGTTCAGGCTGGAGCAACTCTTGGTGAAATTTACTATAGGATT
GCCGAGAAAAGCAAGATTCATGGCTTTTCTGCTGGTGTATGTCCTAGAGTTGGTGCTGGT
GGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTACGGGCTGTCTGTTGAT
AACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCTCAACCGAAAATCAATG
GGGGAAGACTTGTTTTGGGCCATTAGAGGAGGAGGTGGAGCTAGCTATGGCGTCATTGTT
TCTTATAAAATCAAGCTTGTCCAAGTTCCAGATACAGTAACTGTTTTCCGAGTTGCAAGG
ACCTTGGAACAGAATGCAACAAACATTGTGTATCAGTGGCAGCAAGTTGCAGATAAGGTT
GATGGCGATCTATTCATCAGACTAACCATGGATGTGGTGAATAGAAGCCGGAGTGGAGAG
AAGACAGTAAGAGCTACATTCCGGTCCTTGTTCCTTGGAAGTTCTGAAAGACTTCTCTCC
ATCATGAACACGAGCTTACCCGAGTTGGGGTTGCAGAGCTCAGACTGCACCGAGATGAGT
TGGGTAGAGTCTGTCCTCTTCTGGACAAACTTTGCCACCGGAACGCCTGTTGAGGCTTTG
CTTGATCGAAAGCCTCAAGTACTCACCCACTTAAAGAGGAAATCAGACTATCTGAAGGAA
CCAATTCCAAAGGCTGGTTTGGAGGGGATATGGAAGAAAATGATCGAGCTACAGACGCCA
GCTCTGGCCTTCAACCCTTACGGTGGAAAGATGGCTGAGATTTCCCCGTCTGCAACTCCT
TTTCCACACCGCGCAGGGAACCTATGCAAAATCCAGTACGCCACAAACTGGGATGAGGAA
GGGAGTGAGGCGGCCGAACGATACATAAACTTGACACGACAGCTCTACAGTTACATGACT
CCCTTTGTTTCCAAGTCCCCCAGAGAGGCATTTCTCAACTATAGGGATCTGGACTTGGGT
ATCAACCACAACGGTAAGAACAGCTACTTGGAAGGAAGAGTTTATGGGATCAAGTACTTC
AAGAAGAATTTCAACAGGCTGGTGCGGATCAAGACCAAGGTTGATCCTGGTAATTTCTTC
AGAAATGAACAAAGCATCCCAACTCTTCCCTATTAA

Peptide Sequence

PEP ID

VIT_10s0003g05620.t01
PEP Infomation

pep chromosome:12X:10:10435804:10437415:-1 gene:VIT_10s0003g05620 transcript:VIT_10s0003g05620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTSSSSMLSLLSIIFLLSLSWAASDSVHGAFLQCLSTHSQSSHPISAVLYTPDNSSYSS
VLESYIRNLRFNTSTTPKPRLIITATHESHIKAALICSKKHGLQMKIRSGGHDYEGVSYV
SDVPFFILDMFNLRSISVDIEDESAWVQAGATLGEIYYRIAEKSKIHGFSAGVCPRVGAG
GHFSGGGYGNMMRKYGLSVDNIVDAELVDVNGRLLNRKSMGEDLFWAIRGGGGASYGVIV
SYKIKLVQVPDTVTVFRVARTLEQNATNIVYQWQQVADKVDGDLFIRLTMDVVNRSRSGE
KTVRATFRSLFLGSSERLLSIMNTSLPELGLQSSDCTEMSWVESVLFWTNFATGTPVEAL
LDRKPQVLTHLKRKSDYLKEPIPKAGLEGIWKKMIELQTPALAFNPYGGKMAEISPSATP
FPHRAGNLCKIQYATNWDEEGSEAAERYINLTRQLYSYMTPFVSKSPREAFLNYRDLDLG
INHNGKNSYLEGRVYGIKYFKKNFNRLVRIKTKVDPGNFFRNEQSIPTLPY

Transcript Sequence

Transcript ID

VIT_10s0003g05620.t01
Transcript Infomation

cdna chromosome:12X:10:10435804:10437415:-1 gene:VIT_10s0003g05620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGAGGAAACCAGAAATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCAT
CTTTTTGCTCTCTCTTTCATGGGCAGCTTCGGATTCTGTTCATGGAGCTTTTCTTCAATG
CCTTTCTACCCATTCTCAGTCTTCTCATCCCATCTCTGCAGTACTATACACTCCTGATAA
CTCTTCATATTCGTCTGTTTTAGAGTCATACATTAGAAACCTCCGATTCAATACATCTAC
AACCCCTAAACCGCGCCTTATCATCACCGCCACCCATGAGTCGCACATAAAAGCTGCCCT
TATTTGCTCTAAGAAGCATGGCTTGCAGATGAAAATTCGAAGCGGTGGCCATGACTACGA
GGGCGTGTCTTATGTATCCGATGTCCCATTCTTCATCCTTGATATGTTCAATCTTCGATC
CATTAGTGTGGATATAGAAGATGAGAGTGCTTGGGTTCAGGCTGGAGCAACTCTTGGTGA
AATTTACTATAGGATTGCCGAGAAAAGCAAGATTCATGGCTTTTCTGCTGGTGTATGTCC
TAGAGTTGGTGCTGGTGGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTA
CGGGCTGTCTGTTGATAACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCT
CAACCGAAAATCAATGGGGGAAGACTTGTTTTGGGCCATTAGAGGAGGAGGTGGAGCTAG
CTATGGCGTCATTGTTTCTTATAAAATCAAGCTTGTCCAAGTTCCAGATACAGTAACTGT
TTTCCGAGTTGCAAGGACCTTGGAACAGAATGCAACAAACATTGTGTATCAGTGGCAGCA
AGTTGCAGATAAGGTTGATGGCGATCTATTCATCAGACTAACCATGGATGTGGTGAATAG
AAGCCGGAGTGGAGAGAAGACAGTAAGAGCTACATTCCGGTCCTTGTTCCTTGGAAGTTC
TGAAAGACTTCTCTCCATCATGAACACGAGCTTACCCGAGTTGGGGTTGCAGAGCTCAGA
CTGCACCGAGATGAGTTGGGTAGAGTCTGTCCTCTTCTGGACAAACTTTGCCACCGGAAC
GCCTGTTGAGGCTTTGCTTGATCGAAAGCCTCAAGTACTCACCCACTTAAAGAGGAAATC
AGACTATCTGAAGGAACCAATTCCAAAGGCTGGTTTGGAGGGGATATGGAAGAAAATGAT
CGAGCTACAGACGCCAGCTCTGGCCTTCAACCCTTACGGTGGAAAGATGGCTGAGATTTC
CCCGTCTGCAACTCCTTTTCCACACCGCGCAGGGAACCTATGCAAAATCCAGTACGCCAC
AAACTGGGATGAGGAAGGGAGTGAGGCGGCCGAACGATACATAAACTTGACACGACAGCT
CTACAGTTACATGACTCCCTTTGTTTCCAAGTCCCCCAGAGAGGCATTTCTCAACTATAG
GGATCTGGACTTGGGTATCAACCACAACGGTAAGAACAGCTACTTGGAAGGAAGAGTTTA
TGGGATCAAGTACTTCAAGAAGAATTTCAACAGGCTGGTGCGGATCAAGACCAAGGTTGA
TCCTGGTAATTTCTTCAGAAATGAACAAAGCATCCCAACTCTTCCCTATTAA