Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05580.t01
CDS Infomation

cds chromosome:12X:10:10359501:10361112:-1 gene:VIT_10s0003g05580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCATTCTTTTGCTATCTCTT
TCATGGGCAGCTTCGGATTCTGTTCATGGAGCCTTTCTCCAATGCCTTTCTACCCATTCT
CAGTCTTCTCATCCCATCTCTGCAGCACTATACACTCCTGATAACTCTTCATATTCCTCT
GTTTTAGAGTCATACATTAGAAACCTCCGATTCAATACATCTACGACCCCTAAACCGCGC
CTTATCATCACCGCCACCCATGAGTCTCACATACAAGCTGCCATTATTTGCTCTAAGAAG
CATGGCTTGCAGATGAAAATTCGAAGCGGTGGCCATGACTTCGAGGGCGTGTCTTATGTA
TCCGATGTCCCCTTCTTCATCCTTGATATGTTCAATCTTCGATCCATTAGTGTGGATATA
GAAGATGAGAGTGCTTGGGTTCAGGCTGGAGCAACTCTTGGTGAAATGTACTATAGGATT
GCCGAGAAAAGCAAGACTCATGGCTTTCCTGCTGGTGTATGTCCTACGGTAGGTGCTGGT
GGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTACGGGCTGTCTGTCGAT
AACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCTCAACCGAAAATCAATG
GGGGAAGACTTGTTTTGGGCCATTATAGCAGGAGGTGGAGCTAGCTACGGCGTCATTGTT
TCTTATAAAATCAAGCTTGTCCAAGTTCCAGCTACAGTAACTGTTTTCCGAGTTGCAAGG
ACCTTGGAACAGAATGCAACAAACATTGTGTATCAGTGGCAGCAAGTTGCAGATAAGGTT
GATGGCGATCTATTCATCAGACTAACCATGGATGTGGTGAATAGCAGCCGAAGTGGAGAG
AAGACAGTAAGAGCTACATTCCTGTCCTTGTTCCTTGGAAGTTCTGAAAGACTTCTCTCC
ATCATGAACACGAGGTTACCCGAGTTGGGGTTGCAGAGCTCAGACTGCACTGAGATGAGT
TGGGTAGAATCTGTCCTCTTCTGGACAGAGTTTGCCACGGGAACGCCTGTTGAGGCTTTG
CTTGATCGAAACCCTCAAGTACTCACCCACTTGAAGAGGAAATCAGACTATCTGAAGGAA
CCAATTCCAAAGGCTGGTTTGGAGGGGATATGGAAGAAAATGATCGAGCTACAGACGCCA
TATCTGGTCTTCAACCCTTACGGTGGAAAGATGGCTGAGATTTCCCCGTCTGCAACTCCT
TTTCCACACCGCGCAGGGAACCTATGCAAAATCATGTACGCCACAAACTGGGATGAGGAA
GGGAGTGAGGCGGCCGAACGATACATAAACTTGACACAAAAGCTCTACAGTTACATGACT
CCCTTTGTTTCCAAGTCCCCCAGAGAGGCATTTCTCAACTATAGGGATCTGGACTTGGGT
GTCAACCACAACGGTAAGAACAGCTACTTGGAAGGAAGAATTTATGGGATCAAGTATTTC
AAGGAGAATTTCAACAGGCTGGTGCGGATCAAGACCAAGGTTGATCCTGGTAACTTCTTC
AGAAATGAACAAAGCATCCCAACTCTTCCCTATTAA

Peptide Sequence

PEP ID

VIT_10s0003g05580.t01
PEP Infomation

pep chromosome:12X:10:10359501:10361112:-1 gene:VIT_10s0003g05580 transcript:VIT_10s0003g05580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTSSSSMLSLLSIILLLSLSWAASDSVHGAFLQCLSTHSQSSHPISAALYTPDNSSYSS
VLESYIRNLRFNTSTTPKPRLIITATHESHIQAAIICSKKHGLQMKIRSGGHDFEGVSYV
SDVPFFILDMFNLRSISVDIEDESAWVQAGATLGEMYYRIAEKSKTHGFPAGVCPTVGAG
GHFSGGGYGNMMRKYGLSVDNIVDAELVDVNGRLLNRKSMGEDLFWAIIAGGGASYGVIV
SYKIKLVQVPATVTVFRVARTLEQNATNIVYQWQQVADKVDGDLFIRLTMDVVNSSRSGE
KTVRATFLSLFLGSSERLLSIMNTRLPELGLQSSDCTEMSWVESVLFWTEFATGTPVEAL
LDRNPQVLTHLKRKSDYLKEPIPKAGLEGIWKKMIELQTPYLVFNPYGGKMAEISPSATP
FPHRAGNLCKIMYATNWDEEGSEAAERYINLTQKLYSYMTPFVSKSPREAFLNYRDLDLG
VNHNGKNSYLEGRIYGIKYFKENFNRLVRIKTKVDPGNFFRNEQSIPTLPY

Transcript Sequence

Transcript ID

VIT_10s0003g05580.t01
Transcript Infomation

cdna chromosome:12X:10:10359501:10361112:-1 gene:VIT_10s0003g05580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGAGGAAACCAGAAATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCAT
TCTTTTGCTATCTCTTTCATGGGCAGCTTCGGATTCTGTTCATGGAGCCTTTCTCCAATG
CCTTTCTACCCATTCTCAGTCTTCTCATCCCATCTCTGCAGCACTATACACTCCTGATAA
CTCTTCATATTCCTCTGTTTTAGAGTCATACATTAGAAACCTCCGATTCAATACATCTAC
GACCCCTAAACCGCGCCTTATCATCACCGCCACCCATGAGTCTCACATACAAGCTGCCAT
TATTTGCTCTAAGAAGCATGGCTTGCAGATGAAAATTCGAAGCGGTGGCCATGACTTCGA
GGGCGTGTCTTATGTATCCGATGTCCCCTTCTTCATCCTTGATATGTTCAATCTTCGATC
CATTAGTGTGGATATAGAAGATGAGAGTGCTTGGGTTCAGGCTGGAGCAACTCTTGGTGA
AATGTACTATAGGATTGCCGAGAAAAGCAAGACTCATGGCTTTCCTGCTGGTGTATGTCC
TACGGTAGGTGCTGGTGGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTA
CGGGCTGTCTGTCGATAACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCT
CAACCGAAAATCAATGGGGGAAGACTTGTTTTGGGCCATTATAGCAGGAGGTGGAGCTAG
CTACGGCGTCATTGTTTCTTATAAAATCAAGCTTGTCCAAGTTCCAGCTACAGTAACTGT
TTTCCGAGTTGCAAGGACCTTGGAACAGAATGCAACAAACATTGTGTATCAGTGGCAGCA
AGTTGCAGATAAGGTTGATGGCGATCTATTCATCAGACTAACCATGGATGTGGTGAATAG
CAGCCGAAGTGGAGAGAAGACAGTAAGAGCTACATTCCTGTCCTTGTTCCTTGGAAGTTC
TGAAAGACTTCTCTCCATCATGAACACGAGGTTACCCGAGTTGGGGTTGCAGAGCTCAGA
CTGCACTGAGATGAGTTGGGTAGAATCTGTCCTCTTCTGGACAGAGTTTGCCACGGGAAC
GCCTGTTGAGGCTTTGCTTGATCGAAACCCTCAAGTACTCACCCACTTGAAGAGGAAATC
AGACTATCTGAAGGAACCAATTCCAAAGGCTGGTTTGGAGGGGATATGGAAGAAAATGAT
CGAGCTACAGACGCCATATCTGGTCTTCAACCCTTACGGTGGAAAGATGGCTGAGATTTC
CCCGTCTGCAACTCCTTTTCCACACCGCGCAGGGAACCTATGCAAAATCATGTACGCCAC
AAACTGGGATGAGGAAGGGAGTGAGGCGGCCGAACGATACATAAACTTGACACAAAAGCT
CTACAGTTACATGACTCCCTTTGTTTCCAAGTCCCCCAGAGAGGCATTTCTCAACTATAG
GGATCTGGACTTGGGTGTCAACCACAACGGTAAGAACAGCTACTTGGAAGGAAGAATTTA
TGGGATCAAGTATTTCAAGGAGAATTTCAACAGGCTGGTGCGGATCAAGACCAAGGTTGA
TCCTGGTAACTTCTTCAGAAATGAACAAAGCATCCCAACTCTTCCCTATTAA