Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05570.t01
CDS Infomation

cds chromosome:12X:10:10325970:10327774:1 gene:VIT_10s0003g05570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCATCCTTTTGCTATCTCTT
TCATGGGCAGCTTCAGATTCTGTTCATGGAGCCTTTCTCCAATGCCTTTCCAGCCATTCC
CAGCCTTCTCATCCCATCTCTGCAGTGATATACACTCCTGATAACTCTTCATATTCGTCT
GTTTTAGAGTCTTACATTAGAAACCTCCGATTCAATACACCTGCAACGCCTAAACCGTGC
CTTATCATCACCGCCACCCATGAGTCTCACATACAAGCTGCCGTAATTTGCTCTAAGAAG
CATGGCTTGGAGATCAAAATTCGAAGTGGTGGCCATGACTATGAGGGTATGTCTTATGTA
TCCGATGCCCCATTCTTCATCCTTGATATGTTCAATCTTCGATCCATTAGCGTGGATATA
GAAGATGAGAGTTCTTGGGTTCATGCTGGAGCAACTATTGGTGAAATTTACTATAGGATT
GCCGAGAAAAGCAAGACTCGTGGCTTTCCTTCTGGTTTATGTCCTACAGTTGGTGCTGGG
GGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTACGGGCTGTCTGTTGAT
AACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCTCAACCGAAAATCAATG
GGGGAAGACTTGTTTTGGGCCATTAGAGGAGGAGGTGGAGCTAGCTACGGAGTCATTGTT
TCTTATAAAATCAAGCTTGTCCAAGTTCCAGCTACAGTCACTGTTTTCCGAGTTGCAAGG
ACCTTGGAACAGAATGCAACAAACATTGTGTATAAGTGGCAGCAAATTGCAGACAAGGTA
GATGAAGATCTATTCATCAGATTAATCTTGGATGTGGTAAATGACAGCCGGAGTGGAGAG
AAGACAGTAAGAGCTACATTCCTGTCCTTGTTCCTTGGAAGTTCTGAAAGACTTCTCTCC
ATCATGAACACGAGCTTTCCCGAGTTGGGGTTGCAGAGCTCAGACTGCACTGAGATGAGT
TGGGCAGAGTCTGTCCTCTTCTCGGCAGATTTTGCCATTGGAACGCCTGTTGAGGCCTTG
CTTAATCGAACACGTCGTGTACAATACCACTTTAAGAGGAAATCAGACTATTTGAAGGAG
CCAATTCCCAAGGCTGGTTTGGAGGGGCTGTGGAAGAAAATGATCGAGCTAGAGACGCCA
TTTCTGAAATTCAACCCTTACGGTGGAAAGATGGCTGAGATTTCCCCAGCTGCAACTCCT
TTCCCACACCGCGCTGGGAACATATGCAAAATCATGTATGCCACAAACTGGCATGAAGAA
GGGAGTGAGGCAGCCGAACGATACTTAAACTTGACCAGACAGCTTCACAGTTACATGACT
CCCTTTGTATCGAAGTCCCCCAGAGAGGCGTTTCTCAACTATAGAGATCGGGACTTGGGT
ATCAACCACAATGGTAAGAACAGCTACTTGGAAGGAAGAGTTTATGGGATCAAGTATTTC
AAGAAGAATTTCAACAGGCTGGTGCATATTAAGACTAAGGTTGATCCTGGTAACTTCTTC
CGAAATGAACAAAGCATCCCAACACTTCCCTATGAAATCTTGGTGTATTTGGTATTGGAA
GTGGTAATTTCTATTTTTTTTTTTTTTGGATCTTTATATGAGAGTATATGGTGA

Peptide Sequence

PEP ID

VIT_10s0003g05570.t01
PEP Infomation

pep chromosome:12X:10:10325970:10327774:1 gene:VIT_10s0003g05570 transcript:VIT_10s0003g05570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTSSSSMLSLLSIILLLSLSWAASDSVHGAFLQCLSSHSQPSHPISAVIYTPDNSSYSS
VLESYIRNLRFNTPATPKPCLIITATHESHIQAAVICSKKHGLEIKIRSGGHDYEGMSYV
SDAPFFILDMFNLRSISVDIEDESSWVHAGATIGEIYYRIAEKSKTRGFPSGLCPTVGAG
GHFSGGGYGNMMRKYGLSVDNIVDAELVDVNGRLLNRKSMGEDLFWAIRGGGGASYGVIV
SYKIKLVQVPATVTVFRVARTLEQNATNIVYKWQQIADKVDEDLFIRLILDVVNDSRSGE
KTVRATFLSLFLGSSERLLSIMNTSFPELGLQSSDCTEMSWAESVLFSADFAIGTPVEAL
LNRTRRVQYHFKRKSDYLKEPIPKAGLEGLWKKMIELETPFLKFNPYGGKMAEISPAATP
FPHRAGNICKIMYATNWHEEGSEAAERYLNLTRQLHSYMTPFVSKSPREAFLNYRDRDLG
INHNGKNSYLEGRVYGIKYFKKNFNRLVHIKTKVDPGNFFRNEQSIPTLPYEILVYLVLE
VVISIFFFFGSLYESIW

Transcript Sequence

Transcript ID

VIT_10s0003g05570.t01
Transcript Infomation

cdna chromosome:12X:10:10325970:10327774:1 gene:VIT_10s0003g05570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGAGGAAACCAGAAATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCAT
CCTTTTGCTATCTCTTTCATGGGCAGCTTCAGATTCTGTTCATGGAGCCTTTCTCCAATG
CCTTTCCAGCCATTCCCAGCCTTCTCATCCCATCTCTGCAGTGATATACACTCCTGATAA
CTCTTCATATTCGTCTGTTTTAGAGTCTTACATTAGAAACCTCCGATTCAATACACCTGC
AACGCCTAAACCGTGCCTTATCATCACCGCCACCCATGAGTCTCACATACAAGCTGCCGT
AATTTGCTCTAAGAAGCATGGCTTGGAGATCAAAATTCGAAGTGGTGGCCATGACTATGA
GGGTATGTCTTATGTATCCGATGCCCCATTCTTCATCCTTGATATGTTCAATCTTCGATC
CATTAGCGTGGATATAGAAGATGAGAGTTCTTGGGTTCATGCTGGAGCAACTATTGGTGA
AATTTACTATAGGATTGCCGAGAAAAGCAAGACTCGTGGCTTTCCTTCTGGTTTATGTCC
TACAGTTGGTGCTGGGGGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTA
CGGGCTGTCTGTTGATAACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCT
CAACCGAAAATCAATGGGGGAAGACTTGTTTTGGGCCATTAGAGGAGGAGGTGGAGCTAG
CTACGGAGTCATTGTTTCTTATAAAATCAAGCTTGTCCAAGTTCCAGCTACAGTCACTGT
TTTCCGAGTTGCAAGGACCTTGGAACAGAATGCAACAAACATTGTGTATAAGTGGCAGCA
AATTGCAGACAAGGTAGATGAAGATCTATTCATCAGATTAATCTTGGATGTGGTAAATGA
CAGCCGGAGTGGAGAGAAGACAGTAAGAGCTACATTCCTGTCCTTGTTCCTTGGAAGTTC
TGAAAGACTTCTCTCCATCATGAACACGAGCTTTCCCGAGTTGGGGTTGCAGAGCTCAGA
CTGCACTGAGATGAGTTGGGCAGAGTCTGTCCTCTTCTCGGCAGATTTTGCCATTGGAAC
GCCTGTTGAGGCCTTGCTTAATCGAACACGTCGTGTACAATACCACTTTAAGAGGAAATC
AGACTATTTGAAGGAGCCAATTCCCAAGGCTGGTTTGGAGGGGCTGTGGAAGAAAATGAT
CGAGCTAGAGACGCCATTTCTGAAATTCAACCCTTACGGTGGAAAGATGGCTGAGATTTC
CCCAGCTGCAACTCCTTTCCCACACCGCGCTGGGAACATATGCAAAATCATGTATGCCAC
AAACTGGCATGAAGAAGGGAGTGAGGCAGCCGAACGATACTTAAACTTGACCAGACAGCT
TCACAGTTACATGACTCCCTTTGTATCGAAGTCCCCCAGAGAGGCGTTTCTCAACTATAG
AGATCGGGACTTGGGTATCAACCACAATGGTAAGAACAGCTACTTGGAAGGAAGAGTTTA
TGGGATCAAGTATTTCAAGAAGAATTTCAACAGGCTGGTGCATATTAAGACTAAGGTTGA
TCCTGGTAACTTCTTCCGAAATGAACAAAGCATCCCAACACTTCCCTATGAAATCTTGGT
GTATTTGGTATTGGAAGTGGTAATTTCTATTTTTTTTTTTTTTGGATCTTTATATGAGAG
TATATGGTGA