Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05550.t01
CDS Infomation

cds chromosome:12X:10:10224104:10225715:1 gene:VIT_10s0003g05550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCATTCTTTTGCTATCTCTT
TCATGGGCAGCTTCGGATTCTGTTCATGGAGCTTTTCTCCAATGCCTTTCTACCCGTTCT
CAGTCTTCTCATCCCATTTCTGCAGTACTATACACTCCTGATAACTCTTCATATTCGTCT
GTTTTAGAGTCATACATTAGAAACCTCCGATTCAATACATCTGCAACCCTTAAACCGCGC
CTTATCATCACCGCCACCCATGAGTCTCACATAAAAGCTGCCATTATTTGCTCTAAGAAG
CATGGCTTGCAGATGAAAATTCGAAGCGGTGGCCATGACTACGAGGGCGTGTCTTATGTA
TCCGATGTCCCATTCTTCATCCTTGATATGTTCAATCTTCGATCCATTAGTGTGGATATA
GAAGATGAGAGTGCTTGGGTTCAGGCCGGAGCAACTCTTGGTGAAATTTACTATAGGATT
GCCGAGAAAAGCAAGACTCATGGCTTTCCTGCTGGTGTATGTCCTACGGTTGGTGCTGGT
GGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTACGGGCTGTCTGTTGAT
AACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCTCAACCGAAAATCAATG
GGGGAAGACTTGTTTTGGGCCATTAGAGGAGGAGGTGGAGCTAGCTATGGCGTCATTGTT
TCTTATAAAATCAAGCTTGTCCAAGTTCCAGCTACAGTAACTGTTTTCCGAGTTGCAAGG
ACCTTGGAACAGAATACAACAAACATTGTGTATCAGTGGCAGCAAGTTGCAGATAAGGTT
GATGACGATCTATTCATCAGACTAACCATGGATGTGGTGAATAGCAGCCGGAGTGGAGAG
AAGACAGTAAGAGCTACATTCCTCTCCTTGTTCCTTGGAAGTTCTGAAAGACTTCTCTCC
ATCATGAACACGAGCTTACCCGAGTTGGGGTTGCAGAGCTCAGACTGCACTGAGATGAGT
TGGGTAGAGTCTGTCCTCTTCTGGACAAACTTTGCCATTGGAACTCCTGTTGAGGCTTTG
CTTGATCGAAACCCTCAAGTACTCACCCACTTGAAGAGAAAATCAGACTATCTGAAGGAA
CCAATTCCAAAGGCTGGTTTGGAGGGGATATGGAAGAAAATGATCGAGCTACAGACGCCA
GCTCTGACCTTCAACCCTTACGGTGGAAAGATGGCTGAGATTTCCCCGTCTGCAACTCCT
TTTCCACACCGCGCAGGGAACCTGTGCAAAATCCAGTACGCCACAAACTGGGATGAGGAA
GGGAGTGAGGCGGCCGAACGATACATAAACTTGACCCGACAGCTCTACAGTTACATGACT
CCCTTTGTTTCCAAGTTCCCCAGAGAGGCGTTTCTCAACTATAGGGATCTGGACTTGGGT
ATCAACCACAACGGTAAGAACAGCTACTTGGAAGGAAGAGTTTATGGGATCAAGTATTTC
AAGAAGAATTTCAACAGGCTGGTGCGGATTAAGACCAAGGTTGATCCTGGTAACTTCTTC
AGAAATGAACAAAGCATCCCAACTCTTCCCTATTAA

Peptide Sequence

PEP ID

VIT_10s0003g05550.t01
PEP Infomation

pep chromosome:12X:10:10224104:10225715:1 gene:VIT_10s0003g05550 transcript:VIT_10s0003g05550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTSSSSMLSLLSIILLLSLSWAASDSVHGAFLQCLSTRSQSSHPISAVLYTPDNSSYSS
VLESYIRNLRFNTSATLKPRLIITATHESHIKAAIICSKKHGLQMKIRSGGHDYEGVSYV
SDVPFFILDMFNLRSISVDIEDESAWVQAGATLGEIYYRIAEKSKTHGFPAGVCPTVGAG
GHFSGGGYGNMMRKYGLSVDNIVDAELVDVNGRLLNRKSMGEDLFWAIRGGGGASYGVIV
SYKIKLVQVPATVTVFRVARTLEQNTTNIVYQWQQVADKVDDDLFIRLTMDVVNSSRSGE
KTVRATFLSLFLGSSERLLSIMNTSLPELGLQSSDCTEMSWVESVLFWTNFAIGTPVEAL
LDRNPQVLTHLKRKSDYLKEPIPKAGLEGIWKKMIELQTPALTFNPYGGKMAEISPSATP
FPHRAGNLCKIQYATNWDEEGSEAAERYINLTRQLYSYMTPFVSKFPREAFLNYRDLDLG
INHNGKNSYLEGRVYGIKYFKKNFNRLVRIKTKVDPGNFFRNEQSIPTLPY

Transcript Sequence

Transcript ID

VIT_10s0003g05550.t01
Transcript Infomation

cdna chromosome:12X:10:10224104:10225715:1 gene:VIT_10s0003g05550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGAGGAAACCAGAAATGGGAACTTCAAGCTCTTCAATGCTTTCATTGCTTTCAATCAT
TCTTTTGCTATCTCTTTCATGGGCAGCTTCGGATTCTGTTCATGGAGCTTTTCTCCAATG
CCTTTCTACCCGTTCTCAGTCTTCTCATCCCATTTCTGCAGTACTATACACTCCTGATAA
CTCTTCATATTCGTCTGTTTTAGAGTCATACATTAGAAACCTCCGATTCAATACATCTGC
AACCCTTAAACCGCGCCTTATCATCACCGCCACCCATGAGTCTCACATAAAAGCTGCCAT
TATTTGCTCTAAGAAGCATGGCTTGCAGATGAAAATTCGAAGCGGTGGCCATGACTACGA
GGGCGTGTCTTATGTATCCGATGTCCCATTCTTCATCCTTGATATGTTCAATCTTCGATC
CATTAGTGTGGATATAGAAGATGAGAGTGCTTGGGTTCAGGCCGGAGCAACTCTTGGTGA
AATTTACTATAGGATTGCCGAGAAAAGCAAGACTCATGGCTTTCCTGCTGGTGTATGTCC
TACGGTTGGTGCTGGTGGCCACTTCAGTGGTGGCGGTTATGGTAATATGATGAGAAAGTA
CGGGCTGTCTGTTGATAACATTGTGGATGCAGAGTTGGTTGATGTTAATGGCCGACTTCT
CAACCGAAAATCAATGGGGGAAGACTTGTTTTGGGCCATTAGAGGAGGAGGTGGAGCTAG
CTATGGCGTCATTGTTTCTTATAAAATCAAGCTTGTCCAAGTTCCAGCTACAGTAACTGT
TTTCCGAGTTGCAAGGACCTTGGAACAGAATACAACAAACATTGTGTATCAGTGGCAGCA
AGTTGCAGATAAGGTTGATGACGATCTATTCATCAGACTAACCATGGATGTGGTGAATAG
CAGCCGGAGTGGAGAGAAGACAGTAAGAGCTACATTCCTCTCCTTGTTCCTTGGAAGTTC
TGAAAGACTTCTCTCCATCATGAACACGAGCTTACCCGAGTTGGGGTTGCAGAGCTCAGA
CTGCACTGAGATGAGTTGGGTAGAGTCTGTCCTCTTCTGGACAAACTTTGCCATTGGAAC
TCCTGTTGAGGCTTTGCTTGATCGAAACCCTCAAGTACTCACCCACTTGAAGAGAAAATC
AGACTATCTGAAGGAACCAATTCCAAAGGCTGGTTTGGAGGGGATATGGAAGAAAATGAT
CGAGCTACAGACGCCAGCTCTGACCTTCAACCCTTACGGTGGAAAGATGGCTGAGATTTC
CCCGTCTGCAACTCCTTTTCCACACCGCGCAGGGAACCTGTGCAAAATCCAGTACGCCAC
AAACTGGGATGAGGAAGGGAGTGAGGCGGCCGAACGATACATAAACTTGACCCGACAGCT
CTACAGTTACATGACTCCCTTTGTTTCCAAGTTCCCCAGAGAGGCGTTTCTCAACTATAG
GGATCTGGACTTGGGTATCAACCACAACGGTAAGAACAGCTACTTGGAAGGAAGAGTTTA
TGGGATCAAGTATTTCAAGAAGAATTTCAACAGGCTGGTGCGGATTAAGACCAAGGTTGA
TCCTGGTAACTTCTTCAGAAATGAACAAAGCATCCCAACTCTTCCCTATTAA