Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05480.t01
CDS Infomation

cds chromosome:12X:10:10149996:10152002:-1 gene:VIT_10s0003g05480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGAGGTTTCTGTTTCTCTTCCAGAGGAGGAGAAAGCTGTGGAGAAAGTTAATGAA
GCCAAGCCCAAAACAGTTGAGAAGAGCTCCTCCTATAGGGAAGAGAGCAATTTCCTCTCT
GATCTCAAGGACAATGAGAATAAGGCGCTGATCGAGTTGAGATCCAAACTCGAAGAAGCC
ATCCTTAGAAACACTCTCTTCAAGAAGGAGGAGCTCAAGAAAGAGACTGCAAGTGAACCC
AAGGAGGAACAGCCTGCCGCCGCTGAAGAGAAAGAGAAGGAGCCCGAAGCCACCGATGGC
GCAGCCCCAGAAGAAGCTGAACCGAAGACAGAAGGGGAAGACAAGCAAAGCAGCAGCGAA
GTGGAGAAACCGGAGGAGGTGGTGGATCGGGATATCACCCTGTGGGGTGTGCCCCTTTTG
CCCAGTAAGTGCGCCGAGGGAAACGATGTAATCCTCCTGAAGTTCCTGAGGGCGAGGGAG
TTTAAGGTGAACGAGGCCTTTGAGATGCTGAAGAAAACTCTAGAGTGGAGGAAGGAGTTC
AAGACGGATTCCATCCTGGAGGAAGAGTTGGGACAAGACATCAGTTCGGTTGCATACATG
AATGGAGTTGATCGCGAGGGTCACCCCATCTGTTACAACATCTATGGGGTGCTTGAAAAT
CAAGAGCTGTATCAAAAGACTTTTGGGACTGAGGAGAAGCGCAACCAGTTCTTGAGATGG
AGGATCCAGCTGATGGAGAAGGGAATCCAGAAGCTCGATTTCAAGCCTGGCGGTGTCACC
TCTTTGCTCCAAATCAATGATCTCAGCAACTCCCCAGGACCCTCCAAGAAGGAGATCCGG
ATCGCCACAAAGCAAGCTGTTGGCCTTCTGCAGGACAATTACCCAGAATTTGTCGCAAGA
AATATCTTCATAAATGTTCCTTTCTGGTACTATGCCTTGAACGCCCTCTTATCTCCTTTC
TTGACACAAAGGACCAAGAGCAAATTCGTCTTTGTTCGCCCATCCAAAGTCACTGAAACA
CTTCTCAAGTACATCTGTGTGGAGGAAATCCCGGTCCAGTACGGTGGGCTCAAGAGGGAG
AAAGACACCGAATTCTCCATTGAAGATGGTGGAGTTACAGAACTCGTTGTCAAGGCTGGA
TCAACTGAAACAATCGAGATACCTGTCCCCGAGGTTGGAACCACATTGGTATGGGATCTG
ACTGTATTGGGTTGGGAAGTGAATTACAAGGAGGAATTCGTGCCGGCGGACGAGGGATCT
TACACCATCATCATCCAGAAGGGGAAGAAGATGGGGTCACAGGAGGAGCCTGTTCGCAAC
TCTTTCCGCAACAATGAACCAGGGAAGGTTGTGCTGACCATTGAGAACAGTGTGAGCAAG
AAGAAGAGGATTTTCTACAGATACAAGACCAAGAACTGCTCCTCCTTCTGA

Peptide Sequence

PEP ID

VIT_10s0003g05480.t01
PEP Infomation

pep chromosome:12X:10:10149996:10152002:-1 gene:VIT_10s0003g05480 transcript:VIT_10s0003g05480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTEVSVSLPEEEKAVEKVNEAKPKTVEKSSSYREESNFLSDLKDNENKALIELRSKLEEA
ILRNTLFKKEELKKETASEPKEEQPAAAEEKEKEPEATDGAAPEEAEPKTEGEDKQSSSE
VEKPEEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEMLKKTLEWRKEF
KTDSILEEELGQDISSVAYMNGVDREGHPICYNIYGVLENQELYQKTFGTEEKRNQFLRW
RIQLMEKGIQKLDFKPGGVTSLLQINDLSNSPGPSKKEIRIATKQAVGLLQDNYPEFVAR
NIFINVPFWYYALNALLSPFLTQRTKSKFVFVRPSKVTETLLKYICVEEIPVQYGGLKRE
KDTEFSIEDGGVTELVVKAGSTETIEIPVPEVGTTLVWDLTVLGWEVNYKEEFVPADEGS
YTIIIQKGKKMGSQEEPVRNSFRNNEPGKVVLTIENSVSKKKRIFYRYKTKNCSSF

Transcript Sequence

Transcript ID

VIT_10s0003g05480.t01
Transcript Infomation

cdna chromosome:12X:10:10149996:10152002:-1 gene:VIT_10s0003g05480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGACAGAGAGAGAGAGAGAAGTGGGCGGCTTCATTTTTCATTTGTCTTCACAGATTGTG
AGTTGTTGCGCCCAAAGCCATGACTGTGGAGAGTGTTGAGGCCGTTGAGGTTAAGGCTGA
AGACACCCAAATGACTGAGGTTTCTGTTTCTCTTCCAGAGGAGGAGAAAGCTGTGGAGAA
AGTTAATGAAGCCAAGCCCAAAACAGTTGAGAAGAGCTCCTCCTATAGGGAAGAGAGCAA
TTTCCTCTCTGATCTCAAGGACAATGAGAATAAGGCGCTGATCGAGTTGAGATCCAAACT
CGAAGAAGCCATCCTTAGAAACACTCTCTTCAAGAAGGAGGAGCTCAAGAAAGAGACTGC
AAGTGAACCCAAGGAGGAACAGCCTGCCGCCGCTGAAGAGAAAGAGAAGGAGCCCGAAGC
CACCGATGGCGCAGCCCCAGAAGAAGCTGAACCGAAGACAGAAGGGGAAGACAAGCAAAG
CAGCAGCGAAGTGGAGAAACCGGAGGAGGTGGTGGATCGGGATATCACCCTGTGGGGTGT
GCCCCTTTTGCCCAGTAAGTGCGCCGAGGGAAACGATGTAATCCTCCTGAAGTTCCTGAG
GGCGAGGGAGTTTAAGGTGAACGAGGCCTTTGAGATGCTGAAGAAAACTCTAGAGTGGAG
GAAGGAGTTCAAGACGGATTCCATCCTGGAGGAAGAGTTGGGACAAGACATCAGTTCGGT
TGCATACATGAATGGAGTTGATCGCGAGGGTCACCCCATCTGTTACAACATCTATGGGGT
GCTTGAAAATCAAGAGCTGTATCAAAAGACTTTTGGGACTGAGGAGAAGCGCAACCAGTT
CTTGAGATGGAGGATCCAGCTGATGGAGAAGGGAATCCAGAAGCTCGATTTCAAGCCTGG
CGGTGTCACCTCTTTGCTCCAAATCAATGATCTCAGCAACTCCCCAGGACCCTCCAAGAA
GGAGATCCGGATCGCCACAAAGCAAGCTGTTGGCCTTCTGCAGGACAATTACCCAGAATT
TGTCGCAAGAAATATCTTCATAAATGTTCCTTTCTGGTACTATGCCTTGAACGCCCTCTT
ATCTCCTTTCTTGACACAAAGGACCAAGAGCAAATTCGTCTTTGTTCGCCCATCCAAAGT
CACTGAAACACTTCTCAAGTACATCTGTGTGGAGGAAATCCCGGTCCAGTACGGTGGGCT
CAAGAGGGAGAAAGACACCGAATTCTCCATTGAAGATGGTGGAGTTACAGAACTCGTTGT
CAAGGCTGGATCAACTGAAACAATCGAGATACCTGTCCCCGAGGTTGGAACCACATTGGT
ATGGGATCTGACTGTATTGGGTTGGGAAGTGAATTACAAGGAGGAATTCGTGCCGGCGGA
CGAGGGATCTTACACCATCATCATCCAGAAGGGGAAGAAGATGGGGTCACAGGAGGAGCC
TGTTCGCAACTCTTTCCGCAACAATGAACCAGGGAAGGTTGTGCTGACCATTGAGAACAG
TGTGAGCAAGAAGAAGAGGATTTTCTACAGATACAAGACCAAGAACTGCTCCTCCTTCTG
AGAAAGATTATTATGTATCATTGAAAATTGGGAGGGATTGAGGGATGGATACAGGAATTG
AAACTTCTTTCATTCTTTTAGCAGGATGAGTATGATCCTGTGATATGATTTATTTGATTT
GAACACTTTGGTTTTGGGTTTATTAATATGTTTGAAGTTATTACATGAGTTCTTTTCCCC