Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05470.t01
CDS Infomation

cds chromosome:12X:10:10104903:10113041:-1 gene:VIT_10s0003g05470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGACTTCAAGATTTGCAATTCTCTCAGTACTTTCGGCTCTTGTGCTCCATTTTTCG
TTGACTATGTCAGATCCAGTCCATGACAGCTTCCTCCAATGCCTTTCACACCTCTCAGCG
CCCTCCCCACCAATCTCAGGTGTTTTCTACACCCCCACTAATTCTTCATACGCATATGTC
TTGCAGTCATACATACAGAACCTCAGGTTCATGTCATCCACAACCCCAAAACCATCGTTT
ATTGTAGCCTCTTCTCATGTGTCCCATGTCCAAGCCACGATTATTTGCTGCAAGATCCAT
GGTTTGCAGCTTAGAATTCGGAGCGGAGGTCATGATTATGATGGCCTCTCATATGTGTCT
GATGTTCCCTTTGTTATTCTAGATATGTTCAATCTTAGAGAAGTGAGTGTTGATATAGAG
AATGAGTGGGCATGGGTGCAGTCTGGGGCGACAATGGGTGAACTTTATTATAGAATTGCA
GTGAAGAGCAATTTGTATGGCTTCCCAGCTGGGGTTTGTCCCACTGTTGGAGTTGGAGGC
CATTTCAGTGGTGGGGGATATGGGAACATGATGAGGAAATATGGCCTATCTGTTGATAAT
GTGCTTGATGCACAGATAGTTGATGCAAATGGGAGAATTCTAGATAGGGAGTCCATGGGA
GAAGATCTCTTCTGGGCCATTAGAGGAGGAGGTGGAGCTAGCTTTGGAGTGATTGTTGCC
TGGAAAATTAGGTTAGTTCCTGTTCCAGAAACTGTCACTGTTTTCAGAGTTGAAAGAACA
TTGGAACAAGGTGCAATTGACCTTCTTCATCAATGGCAATATGTAGCGGATAAGATAAAT
GAAGATCTCTTCATTAGGGTTGTCATACTGCCAGTTATTAGGAAAGACCATAAGACAATA
AAAGCTAAATTTGTCTCCTTGTTTCTTGGAAATTCTGAAAAGCTTCTTGCTCTTATGAGT
GAAAGCTTCCCTGAGTTGGGCATAAATGGCAACAACTGCATTGAAATGAGTTGGGTTGAA
TCAATTGTTTATTGGTCCAATTATGTAAAGGGAACACCAATCAGTGTATTGCTCGATCGA
ACACCCCAATCACGAAAGTATTTGAAGAAGAAATCAGACTATGTGCAGGCATCCATATCA
AAGGCAGATCTAAAAGGGATATTGAATACCATGATGGAATTACAGAAACCAGCTTTGACA
TTCAACCCTTATGGTGGCAGAATGAGCGAGATTTCAGAGTCTGAGACTCCATTTCCTCAT
AGGGCAGGGAACATCTACAAAATTCAATACTCAGTAACCTGGAAAGAAGAAAGCATGGAG
GCTGCAGATCACAATCTAAATATGATAAGGAGGATTTATGACTACATGACACCTTATGTT
TCAAATTCACCAAGGGGTTCATACCTGAACTACAGAGATATTGACTTAGGCGTCAATCAA
AATGGTAATGTAAGTTATGAAGAAGCTAGTATCTGGGGAACCAAGTATTTCAAGGACAAT
TTCGATAGATTGGTGCAAGTGAAGAGCAGGGTTGATCCAGACAATTTCTTTAGGTATGAA
CAAAGCATTCCATCTGTTACAAATAGGAATTATGTAATGGCAGATCCGATATTTTCATCG
TTAAGGACGAGGAGAAAGCTTAACCACAAGTTCACTGAAAGAGATGTTCTGTATTCAAAA
GCAGAATACTGGTGGTGA

Peptide Sequence

PEP ID

VIT_10s0003g05470.t01
PEP Infomation

pep chromosome:12X:10:10104903:10113041:-1 gene:VIT_10s0003g05470 transcript:VIT_10s0003g05470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTSRFAILSVLSALVLHFSLTMSDPVHDSFLQCLSHLSAPSPPISGVFYTPTNSSYAYV
LQSYIQNLRFMSSTTPKPSFIVASSHVSHVQATIICCKIHGLQLRIRSGGHDYDGLSYVS
DVPFVILDMFNLREVSVDIENEWAWVQSGATMGELYYRIAVKSNLYGFPAGVCPTVGVGG
HFSGGGYGNMMRKYGLSVDNVLDAQIVDANGRILDRESMGEDLFWAIRGGGGASFGVIVA
WKIRLVPVPETVTVFRVERTLEQGAIDLLHQWQYVADKINEDLFIRVVILPVIRKDHKTI
KAKFVSLFLGNSEKLLALMSESFPELGINGNNCIEMSWVESIVYWSNYVKGTPISVLLDR
TPQSRKYLKKKSDYVQASISKADLKGILNTMMELQKPALTFNPYGGRMSEISESETPFPH
RAGNIYKIQYSVTWKEESMEAADHNLNMIRRIYDYMTPYVSNSPRGSYLNYRDIDLGVNQ
NGNVSYEEASIWGTKYFKDNFDRLVQVKSRVDPDNFFRYEQSIPSVTNRNYVMADPIFSS
LRTRRKLNHKFTERDVLYSKAEYWW

Transcript Sequence

Transcript ID

VIT_10s0003g05470.t01
Transcript Infomation

cdna chromosome:12X:10:10104903:10113041:-1 gene:VIT_10s0003g05470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCTCTCCAATGGAATTGAGCAGTAGATGAAATGGGGACTTCAAGATTTGCAATTCTCTC
AGTACTTTCGGCTCTTGTGCTCCATTTTTCGTTGACTATGTCAGATCCAGTCCATGACAG
CTTCCTCCAATGCCTTTCACACCTCTCAGCGCCCTCCCCACCAATCTCAGGTGTTTTCTA
CACCCCCACTAATTCTTCATACGCATATGTCTTGCAGTCATACATACAGAACCTCAGGTT
CATGTCATCCACAACCCCAAAACCATCGTTTATTGTAGCCTCTTCTCATGTGTCCCATGT
CCAAGCCACGATTATTTGCTGCAAGATCCATGGTTTGCAGCTTAGAATTCGGAGCGGAGG
TCATGATTATGATGGCCTCTCATATGTGTCTGATGTTCCCTTTGTTATTCTAGATATGTT
CAATCTTAGAGAAGTGAGTGTTGATATAGAGAATGAGTGGGCATGGGTGCAGTCTGGGGC
GACAATGGGTGAACTTTATTATAGAATTGCAGTGAAGAGCAATTTGTATGGCTTCCCAGC
TGGGGTTTGTCCCACTGTTGGAGTTGGAGGCCATTTCAGTGGTGGGGGATATGGGAACAT
GATGAGGAAATATGGCCTATCTGTTGATAATGTGCTTGATGCACAGATAGTTGATGCAAA
TGGGAGAATTCTAGATAGGGAGTCCATGGGAGAAGATCTCTTCTGGGCCATTAGAGGAGG
AGGTGGAGCTAGCTTTGGAGTGATTGTTGCCTGGAAAATTAGGTTAGTTCCTGTTCCAGA
AACTGTCACTGTTTTCAGAGTTGAAAGAACATTGGAACAAGGTGCAATTGACCTTCTTCA
TCAATGGCAATATGTAGCGGATAAGATAAATGAAGATCTCTTCATTAGGGTTGTCATACT
GCCAGTTATTAGGAAAGACCATAAGACAATAAAAGCTAAATTTGTCTCCTTGTTTCTTGG
AAATTCTGAAAAGCTTCTTGCTCTTATGAGTGAAAGCTTCCCTGAGTTGGGCATAAATGG
CAACAACTGCATTGAAATGAGTTGGGTTGAATCAATTGTTTATTGGTCCAATTATGTAAA
GGGAACACCAATCAGTGTATTGCTCGATCGAACACCCCAATCACGAAAGTATTTGAAGAA
GAAATCAGACTATGTGCAGGCATCCATATCAAAGGCAGATCTAAAAGGGATATTGAATAC
CATGATGGAATTACAGAAACCAGCTTTGACATTCAACCCTTATGGTGGCAGAATGAGCGA
GATTTCAGAGTCTGAGACTCCATTTCCTCATAGGGCAGGGAACATCTACAAAATTCAATA
CTCAGTAACCTGGAAAGAAGAAAGCATGGAGGCTGCAGATCACAATCTAAATATGATAAG
GAGGATTTATGACTACATGACACCTTATGTTTCAAATTCACCAAGGGGTTCATACCTGAA
CTACAGAGATATTGACTTAGGCGTCAATCAAAATGGTAATGTAAGTTATGAAGAAGCTAG
TATCTGGGGAACCAAGTATTTCAAGGACAATTTCGATAGATTGGTGCAAGTGAAGAGCAG
GGTTGATCCAGACAATTTCTTTAGGTATGAACAAAGCATTCCATCTGTTACAAATAGGAA
TTATGTAATGGCAGATCCGATATTTTCATCGTTAAGGACGAGGAGAAAGCTTAACCACAA
GTTCACTGAAAGAGATGTTCTGTATTCAAAAGCAGAATACTGGTGGTGA