Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05450.t01
CDS Infomation

cds chromosome:12X:10:10089099:10098884:-1 gene:VIT_10s0003g05450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGACAGCAAGCTCTGCCTCTGTTTTTGGGCTTGTGTTCCTCCTTGGTTTTCTGTTT
TTCTCTTCATCGTCGTCATCATGCGAAGCCTCAGATTCAGTCTATGACACCTTTATTCAG
TGCCTAGCCAGCCATTCAGATCCATCTCCACCGGCTTCATCAATAGTTTATAATCAGTCC
AATTCTTCCTACACAACAGTCCTTCAATCTTATATCAGAAACCGAAGGTTCAACACATCT
TCCACGCCCAAACCCCTCATCATTGTGACCCCCTTGGTTGAATCCCATGTCCAGGCTGCC
ATTCTTTGCTCCAAAAACGTCGGCATGGAGATGAAAATCCGCAGCGGCGGCCACGACTAT
GATGGGCTTTCGTATATCTCGGATATCCCCTTTTTCATCCTCGACTTGTTCAATCTCCGG
GCCATCGACGTTAACATAGGCGATGAGACTGCTTGGGTGCAGGCAGGTGCCACTCTTGGA
GAGCTTTATTATAGAATTTGGGAGAAGAGCAAACTACATGGATTTCCAGCTGGGGTTGGC
CAAACTGTGGGTGCTGGAGGCCACATAAGTGGGGGAGGGTATGGCACTATGTTGCGAAAA
TATGGACTGTCCATTGATCAGCTTGTGGACGCAAAAATTGTGGATGTGAATGGCAGAATT
CTGGATAGGAAGGCCATGGGAGAGGACCTCTTCTGGGCCATTAGAGGAGGTGGTGGATCC
AGCTTTGGGGTCATACTTGCATACAAAATCAAGCTCGTTGCTGTCCCCGAGACTGTCACA
GTTTTCAGGGTACAGAGGACTTTGGACCAAAATGCCACCGACCTTGTGTACAAATGGCAA
CTCGTTGCCGATAAGATCGACAATGATCTGTTCATCAGGGTTCTCCTGCAACCCGTGACC
GTGAACAAGAACAGAACTATCAGAGCATCGTTTGTTTCGCTGTTTCTCGGGGACGCTGCT
CGGCTCTTGTCTGTCATGGACAAGGATTTTCCTGCACTGGGGCTGAAGAAAGAGGACTGC
ATGGAAATGAGCTGGATTGAGTCAGTTCTGTACTGGGCTAATTTCGATAATGGAACATCG
CCTGATGCTCTGCTGAACAGGACTTCGGATTCAGTGAACTTCTTGAAGAGGAAGTCGGAT
TATGTGCAGACACCAATCTCGAAGGATGGACTGGAATGGATGTGGAAGAAGATGATTGAG
ATAGGCAAAACAGGGCTGGTGTTCAACCCATATGGAGGGCGAATGAGCGAAATTCCCAGC
TCAGAAACGGCCTTCCCCCACAGAGCTGGGAACATATACAAGATCCAGTACTCAGTGAAC
TGGAGCGAAGAAGGTGAAGAAGCAGACAAAGAGTACATGACCCAGATAAGAAGGCTCTAC
AGTTACATGACCCCATTCGTCTCCAAGTCCCCAAGAGGTTCATTTCTCAATTACAGAGAC
GTTGACATTGGGGTCACTAAGACCTGGTCCTACGATGAAGGCAAAGTTTACGGTGCCAAG
TACTTCATGAACAATTTTGATAGATTGGTGAAGGTGAAGACTGCATGGGATGGTGCTGGT
TTGTTTGGGACTCACATTTCAGTATCTGTAGATGTCAACATGGAAGCAAAACCTGTGGAG
CTTATCGGCATGACCTTCCACCAGAAGCCTCCCACTGTAGACTGGATGGACGGAACTTTT
GATAATGCCTTGTTGTCACCTGCTATCCCCAATTGCTCCTCTTGA

Peptide Sequence

PEP ID

VIT_10s0003g05450.t01
PEP Infomation

pep chromosome:12X:10:10089099:10098884:-1 gene:VIT_10s0003g05450 transcript:VIT_10s0003g05450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRTASSASVFGLVFLLGFLFFSSSSSSCEASDSVYDTFIQCLASHSDPSPPASSIVYNQS
NSSYTTVLQSYIRNRRFNTSSTPKPLIIVTPLVESHVQAAILCSKNVGMEMKIRSGGHDY
DGLSYISDIPFFILDLFNLRAIDVNIGDETAWVQAGATLGELYYRIWEKSKLHGFPAGVG
QTVGAGGHISGGGYGTMLRKYGLSIDQLVDAKIVDVNGRILDRKAMGEDLFWAIRGGGGS
SFGVILAYKIKLVAVPETVTVFRVQRTLDQNATDLVYKWQLVADKIDNDLFIRVLLQPVT
VNKNRTIRASFVSLFLGDAARLLSVMDKDFPALGLKKEDCMEMSWIESVLYWANFDNGTS
PDALLNRTSDSVNFLKRKSDYVQTPISKDGLEWMWKKMIEIGKTGLVFNPYGGRMSEIPS
SETAFPHRAGNIYKIQYSVNWSEEGEEADKEYMTQIRRLYSYMTPFVSKSPRGSFLNYRD
VDIGVTKTWSYDEGKVYGAKYFMNNFDRLVKVKTAWDGAGLFGTHISVSVDVNMEAKPVE
LIGMTFHQKPPTVDWMDGTFDNALLSPAIPNCSS

Transcript Sequence

Transcript ID

VIT_10s0003g05450.t01
Transcript Infomation

cdna chromosome:12X:10:10089099:10098884:-1 gene:VIT_10s0003g05450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAAATATGAGGACAGCAAGCTCTGCCTCTGTTTTTGGGCTTGTGTTCCTCCTTGGTTTT
CTGTTTTTCTCTTCATCGTCGTCATCATGCGAAGCCTCAGATTCAGTCTATGACACCTTT
ATTCAGTGCCTAGCCAGCCATTCAGATCCATCTCCACCGGCTTCATCAATAGTTTATAAT
CAGTCCAATTCTTCCTACACAACAGTCCTTCAATCTTATATCAGAAACCGAAGGTTCAAC
ACATCTTCCACGCCCAAACCCCTCATCATTGTGACCCCCTTGGTTGAATCCCATGTCCAG
GCTGCCATTCTTTGCTCCAAAAACGTCGGCATGGAGATGAAAATCCGCAGCGGCGGCCAC
GACTATGATGGGCTTTCGTATATCTCGGATATCCCCTTTTTCATCCTCGACTTGTTCAAT
CTCCGGGCCATCGACGTTAACATAGGCGATGAGACTGCTTGGGTGCAGGCAGGTGCCACT
CTTGGAGAGCTTTATTATAGAATTTGGGAGAAGAGCAAACTACATGGATTTCCAGCTGGG
GTTGGCCAAACTGTGGGTGCTGGAGGCCACATAAGTGGGGGAGGGTATGGCACTATGTTG
CGAAAATATGGACTGTCCATTGATCAGCTTGTGGACGCAAAAATTGTGGATGTGAATGGC
AGAATTCTGGATAGGAAGGCCATGGGAGAGGACCTCTTCTGGGCCATTAGAGGAGGTGGT
GGATCCAGCTTTGGGGTCATACTTGCATACAAAATCAAGCTCGTTGCTGTCCCCGAGACT
GTCACAGTTTTCAGGGTACAGAGGACTTTGGACCAAAATGCCACCGACCTTGTGTACAAA
TGGCAACTCGTTGCCGATAAGATCGACAATGATCTGTTCATCAGGGTTCTCCTGCAACCC
GTGACCGTGAACAAGAACAGAACTATCAGAGCATCGTTTGTTTCGCTGTTTCTCGGGGAC
GCTGCTCGGCTCTTGTCTGTCATGGACAAGGATTTTCCTGCACTGGGGCTGAAGAAAGAG
GACTGCATGGAAATGAGCTGGATTGAGTCAGTTCTGTACTGGGCTAATTTCGATAATGGA
ACATCGCCTGATGCTCTGCTGAACAGGACTTCGGATTCAGTGAACTTCTTGAAGAGGAAG
TCGGATTATGTGCAGACACCAATCTCGAAGGATGGACTGGAATGGATGTGGAAGAAGATG
ATTGAGATAGGCAAAACAGGGCTGGTGTTCAACCCATATGGAGGGCGAATGAGCGAAATT
CCCAGCTCAGAAACGGCCTTCCCCCACAGAGCTGGGAACATATACAAGATCCAGTACTCA
GTGAACTGGAGCGAAGAAGGTGAAGAAGCAGACAAAGAGTACATGACCCAGATAAGAAGG
CTCTACAGTTACATGACCCCATTCGTCTCCAAGTCCCCAAGAGGTTCATTTCTCAATTAC
AGAGACGTTGACATTGGGGTCACTAAGACCTGGTCCTACGATGAAGGCAAAGTTTACGGT
GCCAAGTACTTCATGAACAATTTTGATAGATTGGTGAAGGTGAAGACTGCATGGGATGGT
GCTGGTTTGTTTGGGACTCACATTTCAGTATCTGTAGATGTCAACATGGAAGCAAAACCT
GTGGAGCTTATCGGCATGACCTTCCACCAGAAGCCTCCCACTGTAGACTGGATGGACGGA
ACTTTTGATAATGCCTTGTTGTCACCTGCTATCCCCAATTGCTCCTCTTGA