Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05420.t01
CDS Infomation

cds chromosome:12X:10:10008871:10010615:-1 gene:VIT_10s0003g05420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGTATTCAAATTTTGCCATGTTTCCATTACTTTTCATTCTGCTATCAGCTTCAGTG
ACAGCTTCAGATCCTATTCTAGAAAAGTTTTCCCAATGTGTCTCTCTCAATTCCGAGATT
CTTATCCCAGTATCCACTGCCTTTTACACCCCAAACACCACTTCTTTCAGTGCTTTTCTG
CAATCTTCTGCACAAAACCTCAGGTATTTGGTGCCATCTGCACCCAAGCCTGAGTTTATC
TTTACTCCAATGCATGACACCCATGTCCAAGCAGCTGTTATTTGTTCAAAGCAGCTTTCT
ATTCACATGAGAGTACGGAGCGGTGGCCATGACTATGAGGGCCTTTCTTATGTTTCTGAA
ATGGAAAAGCCATTCATTATGGTGGACCTGGCCAGGCTTCGAGGCATCAAAGTTGATATA
GATGACAATAGTGCATGGGTTCAGGCTGGTGCCACTGTTGGTGAAGTTTACTACAGAATT
TATGAGAAAAGCAAGACTCATGGCTTCCCAGCCGGCCTCTGCACAAGCTTGGGTATTGGT
GGGCACATCACCGGAGGTGCTTATGGATCCATGATGAGAAAATATGGACTGGGTGCTGAC
AATGTGATGGATGCTCGGATTGTTGATGTTCATGGCAGAATTCTTGACCGAGAATCCATG
GGAGAAGACCTGTTTTGGGCTATTAGAGGAGGCGGAGGAGCCAGCTTTGGGATCATTCTC
TGGTGGAAAATAAGGTTGGTTCCTGTTCCATCAACCGTGACAGTTTTCACAGTGGGAAGA
GCCTTAGAGCAAGGGGCAACAAAGCTCCTCTATAGATGGCAACAAGTTGCAGATAAGCTC
CATGAAGATCTCTTCATTAGAGTCATCATATCAGTGAAGGCAAATGAAAAAGGTAATAAA
ACCGTCAGCGCTGCCTTCAACTCACTGTTTCTGGGTGGGGTGGACAGACTCCTCCAAATA
ATGGGAGAGAGCTTCCCAGAGTTGGGTTTGACAATGAAGGATTGTACTGAAATGAGCTGG
ATCAGATCAGTGCTTTACATCGGGGGCTACCCAAGTGGAACACCCCCTGAAGTTCTTCTA
CAGGGGAAATCAACATTCAAGAACTATTTCAAGGCCAAATCAGACTTTGTGAAGGAACCC
ATCCCTGAAAACGCCCTTGAAGGGCTGTGGACGAGGTTATTAGAAGAAGAGTCTCCACTG
ATGATATGGAATCCTTATGGTGGAATGATGAGTAAGATTTCAGAGTCTGAAATTCCATTC
CCTCATCGAAAGGGCAACATATTTAAAATCCAGTTATTAACAACATGGCAAGATGGGGAG
AAGAACACGAAAAACCATATGGAATGGATAAGAAGGCTTTACTGCTACATGACTCCTTAT
GTTTCCATGTTCCCTAGAGCTGCATATGTAAATTACAGGGATCTGGATTTGGGCATCAAC
AAGAACAGTAACACAAGCTTCATACAGGCAAGTGTTTGGGGTGCCAAGTACTTCAAGGGC
AACTTCAACAGATTGGTACATGTAAAGACCAAGGTTGATCCAGATAACTTCTTCAGGCAT
GAACAGAGCATCCCACCAATGCCACAGCTCATCAAGGGCTCCGTCCATGGACTTGAGTAG

Peptide Sequence

PEP ID

VIT_10s0003g05420.t01
PEP Infomation

pep chromosome:12X:10:10008871:10010615:-1 gene:VIT_10s0003g05420 transcript:VIT_10s0003g05420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVYSNFAMFPLLFILLSASVTASDPILEKFSQCVSLNSEILIPVSTAFYTPNTTSFSAFL
QSSAQNLRYLVPSAPKPEFIFTPMHDTHVQAAVICSKQLSIHMRVRSGGHDYEGLSYVSE
MEKPFIMVDLARLRGIKVDIDDNSAWVQAGATVGEVYYRIYEKSKTHGFPAGLCTSLGIG
GHITGGAYGSMMRKYGLGADNVMDARIVDVHGRILDRESMGEDLFWAIRGGGGASFGIIL
WWKIRLVPVPSTVTVFTVGRALEQGATKLLYRWQQVADKLHEDLFIRVIISVKANEKGNK
TVSAAFNSLFLGGVDRLLQIMGESFPELGLTMKDCTEMSWIRSVLYIGGYPSGTPPEVLL
QGKSTFKNYFKAKSDFVKEPIPENALEGLWTRLLEEESPLMIWNPYGGMMSKISESEIPF
PHRKGNIFKIQLLTTWQDGEKNTKNHMEWIRRLYCYMTPYVSMFPRAAYVNYRDLDLGIN
KNSNTSFIQASVWGAKYFKGNFNRLVHVKTKVDPDNFFRHEQSIPPMPQLIKGSVHGLE

Transcript Sequence

Transcript ID

VIT_10s0003g05420.t01
Transcript Infomation

cdna chromosome:12X:10:10008871:10010615:-1 gene:VIT_10s0003g05420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCAGAGAGAAGCAATGGTGTATTCAAATTTTGCCATGTTTCCATTACTTTTCATTCTG
CTATCAGCTTCAGTGACAGCTTCAGATCCTATTCTAGAAAAGTTTTCCCAATGTGTCTCT
CTCAATTCCGAGATTCTTATCCCAGTATCCACTGCCTTTTACACCCCAAACACCACTTCT
TTCAGTGCTTTTCTGCAATCTTCTGCACAAAACCTCAGGTATTTGGTGCCATCTGCACCC
AAGCCTGAGTTTATCTTTACTCCAATGCATGACACCCATGTCCAAGCAGCTGTTATTTGT
TCAAAGCAGCTTTCTATTCACATGAGAGTACGGAGCGGTGGCCATGACTATGAGGGCCTT
TCTTATGTTTCTGAAATGGAAAAGCCATTCATTATGGTGGACCTGGCCAGGCTTCGAGGC
ATCAAAGTTGATATAGATGACAATAGTGCATGGGTTCAGGCTGGTGCCACTGTTGGTGAA
GTTTACTACAGAATTTATGAGAAAAGCAAGACTCATGGCTTCCCAGCCGGCCTCTGCACA
AGCTTGGGTATTGGTGGGCACATCACCGGAGGTGCTTATGGATCCATGATGAGAAAATAT
GGACTGGGTGCTGACAATGTGATGGATGCTCGGATTGTTGATGTTCATGGCAGAATTCTT
GACCGAGAATCCATGGGAGAAGACCTGTTTTGGGCTATTAGAGGAGGCGGAGGAGCCAGC
TTTGGGATCATTCTCTGGTGGAAAATAAGGTTGGTTCCTGTTCCATCAACCGTGACAGTT
TTCACAGTGGGAAGAGCCTTAGAGCAAGGGGCAACAAAGCTCCTCTATAGATGGCAACAA
GTTGCAGATAAGCTCCATGAAGATCTCTTCATTAGAGTCATCATATCAGTGAAGGCAAAT
GAAAAAGGTAATAAAACCGTCAGCGCTGCCTTCAACTCACTGTTTCTGGGTGGGGTGGAC
AGACTCCTCCAAATAATGGGAGAGAGCTTCCCAGAGTTGGGTTTGACAATGAAGGATTGT
ACTGAAATGAGCTGGATCAGATCAGTGCTTTACATCGGGGGCTACCCAAGTGGAACACCC
CCTGAAGTTCTTCTACAGGGGAAATCAACATTCAAGAACTATTTCAAGGCCAAATCAGAC
TTTGTGAAGGAACCCATCCCTGAAAACGCCCTTGAAGGGCTGTGGACGAGGTTATTAGAA
GAAGAGTCTCCACTGATGATATGGAATCCTTATGGTGGAATGATGAGTAAGATTTCAGAG
TCTGAAATTCCATTCCCTCATCGAAAGGGCAACATATTTAAAATCCAGTTATTAACAACA
TGGCAAGATGGGGAGAAGAACACGAAAAACCATATGGAATGGATAAGAAGGCTTTACTGC
TACATGACTCCTTATGTTTCCATGTTCCCTAGAGCTGCATATGTAAATTACAGGGATCTG
GATTTGGGCATCAACAAGAACAGTAACACAAGCTTCATACAGGCAAGTGTTTGGGGTGCC
AAGTACTTCAAGGGCAACTTCAACAGATTGGTACATGTAAAGACCAAGGTTGATCCAGAT
AACTTCTTCAGGCATGAACAGAGCATCCCACCAATGCCACAGCTCATCAAGGGCTCCGTC
CATGGACTTGAGTAGTGTTCTTTTCACATCCCCATCAATAAGCTTGTATTTCTAGTCTAG
GATGATGATACATATGTGATCGGTACGTACTAGAGATAATGAGGCCCATCTCCTTAAATA
TGTAT