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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g05040.t01
CDS Infomation

cds chromosome:12X:10:8998263:9015334:1 gene:VIT_10s0003g05040 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxyisobutyrate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7TKK7]
Sequence

ATGGCGATTTCCAGAGTAAGATCACTCTTGCCTTTTTCTAGTGCTATACACAAGTCTGTT
TCTTCCATCTACAGATTCTATTCATCAACCTCCTCAACCCACTTTGAGAATGTTGGGTTC
ATAGGGCTGGGAAATATGGGCTCCAGAATGGCGAACAATCTAATTATGGCTGGATATAAA
GTTGCAGTTCATGACATAAACCATGAAGTCATGAGGATGTTTGCAGAGCGGGGAGTTCCC
ACAAAAGAAACTCCTTTTGAAATTGCAGAAACAAGTGATGTTGTAATTACCATGTTGCCT
TCATCCTCCCATGTATTGGATGTTTACACTGGACCAAATGGTCTGATTCATGATGGGAAT
CTGCTAAGACCAATGTTGTTCATAGATTCGTCTACAATTGATCCCCAGACATCAAGAAGG
CTTTCTGTGGCAGTATCTAACTGTGGCCTAAAACAAAGGAAAGATATCTGGGAGACCCCC
ATAATTTTGGATGCCCCTGTATCTGGAGGTGTTCTTGCTGCAGAAACTGGGACACTTACT
TTCATGGTTGGTGGATCAGAGGAAGCTTATCTGGCTGCAAAATCCTTATTCCTCTCCATG
GGTAAAAATACAATCTATTGCGGTGGAGCAGGAAATGGTTCAGCAGCAAAGATCTGCAAC
AATTTGGCGATGGCTGTGAGTATGCTTGGAGTGTCCGAAGCCTTTGCTCTTGGTCAGTCT
CTAGGAATTGCTGCTGGTACCCTAGCAAAGATATTCAATTCTTCAAGCGCTCGCTGTTGG
AGTAGTGACAGTTATAATCCAGTTCCTGGAGTGATGGAAGGGGTGCCCTCTTCGAGGAAT
TATGTTGGTGGATTTGCAACTAAGCTTATGGCTAAAGACTTAAACCTTGCTGCAGAATCA
GCCAAAGAGACCGGCCTCACATGCCCATTGACATCCCAAGCAAAAGAGATATTTGTGGAG
CTTTGCAAGGAGGGTCATGAAGCCAAGGACTTCTCCTGTGTTTTTCGCCATTATTACTCA
GGCAAGGATGAGCATTAG

Peptide Sequence

PEP ID

VIT_10s0003g05040.t01
PEP Infomation

pep chromosome:12X:10:8998263:9015334:1 gene:VIT_10s0003g05040 transcript:VIT_10s0003g05040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxyisobutyrate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7TKK7]
Sequence

MAISRVRSLLPFSSAIHKSVSSIYRFYSSTSSTHFENVGFIGLGNMGSRMANNLIMAGYK
VAVHDINHEVMRMFAERGVPTKETPFEIAETSDVVITMLPSSSHVLDVYTGPNGLIHDGN
LLRPMLFIDSSTIDPQTSRRLSVAVSNCGLKQRKDIWETPIILDAPVSGGVLAAETGTLT
FMVGGSEEAYLAAKSLFLSMGKNTIYCGGAGNGSAAKICNNLAMAVSMLGVSEAFALGQS
LGIAAGTLAKIFNSSSARCWSSDSYNPVPGVMEGVPSSRNYVGGFATKLMAKDLNLAAES
AKETGLTCPLTSQAKEIFVELCKEGHEAKDFSCVFRHYYSGKDEH

Transcript Sequence

Transcript ID

VIT_10s0003g05040.t01
Transcript Infomation

cdna chromosome:12X:10:8998263:9015334:1 gene:VIT_10s0003g05040 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxyisobutyrate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7TKK7]
Sequence

GGACTTATCTTTTCTCTGCAACTGTAGAGTCTGCCAGTAATGGCGATTTCCAGAGTAAGA
TCACTCTTGCCTTTTTCTAGTGCTATACACAAGTCTGTTTCTTCCATCTACAGATTCTAT
TCATCAACCTCCTCAACCCACTTTGAGAATGTTGGGTTCATAGGGCTGGGAAATATGGGC
TCCAGAATGGCGAACAATCTAATTATGGCTGGATATAAAGTTGCAGTTCATGACATAAAC
CATGAAGTCATGAGGATGTTTGCAGAGCGGGGAGTTCCCACAAAAGAAACTCCTTTTGAA
ATTGCAGAAACAAGTGATGTTGTAATTACCATGTTGCCTTCATCCTCCCATGTATTGGAT
GTTTACACTGGACCAAATGGTCTGATTCATGATGGGAATCTGCTAAGACCAATGTTGTTC
ATAGATTCGTCTACAATTGATCCCCAGACATCAAGAAGGCTTTCTGTGGCAGTATCTAAC
TGTGGCCTAAAACAAAGGAAAGATATCTGGGAGACCCCCATAATTTTGGATGCCCCTGTA
TCTGGAGGTGTTCTTGCTGCAGAAACTGGGACACTTACTTTCATGGTTGGTGGATCAGAG
GAAGCTTATCTGGCTGCAAAATCCTTATTCCTCTCCATGGGTAAAAATACAATCTATTGC
GGTGGAGCAGGAAATGGTTCAGCAGCAAAGATCTGCAACAATTTGGCGATGGCTGTGAGT
ATGCTTGGAGTGTCCGAAGCCTTTGCTCTTGGTCAGTCTCTAGGAATTGCTGCTGGTACC
CTAGCAAAGATATTCAATTCTTCAAGCGCTCGCTGTTGGAGTAGTGACAGTTATAATCCA
GTTCCTGGAGTGATGGAAGGGGTGCCCTCTTCGAGGAATTATGTTGGTGGATTTGCAACT
AAGCTTATGGCTAAAGACTTAAACCTTGCTGCAGAATCAGCCAAAGAGACCGGCCTCACA
TGCCCATTGACATCCCAAGCAAAAGAGATATTTGTGGAGCTTTGCAAGGAGGGTCATGAA
GCCAAGGACTTCTCCTGTGTTTTTCGCCATTATTACTCAGGCAAGGATGAGCATTAGTTT
GAAATGTGCTTGTGGAAGA