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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g04880.t01
CDS Infomation

cds chromosome:12X:10:8748809:8753600:1 gene:VIT_10s0003g04880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TKJ3]
Sequence

ATGGCTCATTTGGCCGTCTCTCAGGTTTCTGTAACTGTTCCGGTTGGTGGCGAGTCGTCT
CTTCGAAGATCCGTGTTTCAGAGACACATTATCAGCTTTCATGAGAAATCATGGGCACCT
ATATTGGCTTTGGATTTAAAAACCAAGAATGTGCGTTTGAAAAATCGTTATGTAGTATGC
ATGTCAGTGCAACAAGCTAGCATACCAAAGGTTGCAGTTTCACCTTTAGAACTTGAAGAT
GCCAAAGGGCCCCCACTAAATTTATACAAGCCCAAGGAACCTTATACAGCTACCATAGTT
TCTGTTGAAAGGATTGTGGGCCCAAAAGCACCAGGAGAGACATGTCATATTGTGATTGAT
CACGGTGGCATTGTTCCCTATTGGGAAGGACAGAGTTATGGTGTAATTCCTCCTGGTGAA
AACCCAAAAAAACCAGGAGCTCCCCACAATGTTCGGCTTTATTCAATTGCATCCACCAGG
TATGGAGACTTTTTTGATGGGAAGACAACCACCCTGTGTGTTCGCCGTGCTGTCTATTAT
GACCCTGTGACTGGAAAAGAGGATCCTTCAAAAAATGGTGTGTGCAGCAATTATCTTTGT
GATTCAAAGCCTGGAGACAAAATCAAGATCACTGGTCCCTCTGGTAAGATTATGCTTTTG
CCAGAAGACGACCCAAATGCTACTCACATAATGATTGCTACTGGTACTGGAGTGGCTCCA
TATAGAGGTTACCTCCGCCGCATGTTTATGGAGGATGTCCCTTCATTCAGGTTTGGTGGT
CTAGCTTGGCTGTTCCTTGGGGTGGCCAATACTGACAGTCTCCTCTATGACAATGAGTTC
ACCAAGTATCTTAAGGACTACCCAGATCAGTTTAGATATGACAAGGCTCTTAGTAGAGAA
CAAAAGAACAGGAATGGAGGCAAGATGTATGTTCAGGATAAGATTGAGGAATACAGTGAT
GAGATTTTCAAGCTGTTGGATGGTGGAGCCCATATATATTTTTGCGGGCTTAAGGGAATG
ATGCCTGGGATCCAAGAAACTCTTAAGAGGGTTGCAGACCAGAGAGGAGAGAACTGGGAA
GAGAAGCTTGCACAGCTCAAAAAGAACAAGCAATGGCATGTTGAAGTCTATTGA

Peptide Sequence

PEP ID

VIT_10s0003g04880.t01
PEP Infomation

pep chromosome:12X:10:8748809:8753600:1 gene:VIT_10s0003g04880 transcript:VIT_10s0003g04880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TKJ3]
Sequence

MAHLAVSQVSVTVPVGGESSLRRSVFQRHIISFHEKSWAPILALDLKTKNVRLKNRYVVC
MSVQQASIPKVAVSPLELEDAKGPPLNLYKPKEPYTATIVSVERIVGPKAPGETCHIVID
HGGIVPYWEGQSYGVIPPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTTTLCVRRAVYY
DPVTGKEDPSKNGVCSNYLCDSKPGDKIKITGPSGKIMLLPEDDPNATHIMIATGTGVAP
YRGYLRRMFMEDVPSFRFGGLAWLFLGVANTDSLLYDNEFTKYLKDYPDQFRYDKALSRE
QKNRNGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQETLKRVADQRGENWE
EKLAQLKKNKQWHVEVY

Transcript Sequence

Transcript ID

VIT_10s0003g04880.t01
Transcript Infomation

cdna chromosome:12X:10:8748809:8753600:1 gene:VIT_10s0003g04880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TKJ3]
Sequence

CTTTGCTGATCGCCAAGGGGTCATCCTCACTCGCATGATCCCACCAAAAGCCCTATAAGA
AACCCTAACGTAGTCACTTCCTCTGCTGAATCGAATCTTTCGAGCTTCCCCATCGCATCG
TCATGGCTCATTTGGCCGTCTCTCAGGTTTCTGTAACTGTTCCGGTTGGTGGCGAGTCGT
CTCTTCGAAGATCCGTGTTTCAGAGACACATTATCAGCTTTCATGAGAAATCATGGGCAC
CTATATTGGCTTTGGATTTAAAAACCAAGAATGTGCGTTTGAAAAATCGTTATGTAGTAT
GCATGTCAGTGCAACAAGCTAGCATACCAAAGGTTGCAGTTTCACCTTTAGAACTTGAAG
ATGCCAAAGGGCCCCCACTAAATTTATACAAGCCCAAGGAACCTTATACAGCTACCATAG
TTTCTGTTGAAAGGATTGTGGGCCCAAAAGCACCAGGAGAGACATGTCATATTGTGATTG
ATCACGGTGGCATTGTTCCCTATTGGGAAGGACAGAGTTATGGTGTAATTCCTCCTGGTG
AAAACCCAAAAAAACCAGGAGCTCCCCACAATGTTCGGCTTTATTCAATTGCATCCACCA
GGTATGGAGACTTTTTTGATGGGAAGACAACCACCCTGTGTGTTCGCCGTGCTGTCTATT
ATGACCCTGTGACTGGAAAAGAGGATCCTTCAAAAAATGGTGTGTGCAGCAATTATCTTT
GTGATTCAAAGCCTGGAGACAAAATCAAGATCACTGGTCCCTCTGGTAAGATTATGCTTT
TGCCAGAAGACGACCCAAATGCTACTCACATAATGATTGCTACTGGTACTGGAGTGGCTC
CATATAGAGGTTACCTCCGCCGCATGTTTATGGAGGATGTCCCTTCATTCAGGTTTGGTG
GTCTAGCTTGGCTGTTCCTTGGGGTGGCCAATACTGACAGTCTCCTCTATGACAATGAGT
TCACCAAGTATCTTAAGGACTACCCAGATCAGTTTAGATATGACAAGGCTCTTAGTAGAG
AACAAAAGAACAGGAATGGAGGCAAGATGTATGTTCAGGATAAGATTGAGGAATACAGTG
ATGAGATTTTCAAGCTGTTGGATGGTGGAGCCCATATATATTTTTGCGGGCTTAAGGGAA
TGATGCCTGGGATCCAAGAAACTCTTAAGAGGGTTGCAGACCAGAGAGGAGAGAACTGGG
AAGAGAAGCTTGCACAGCTCAAAAAGAACAAGCAATGGCATGTTGAAGTCTATTGATCTT
GCATAACTGTGCATCAAGAGAATGCTGGAGCCTCTTCCTGTAAGGCAGTATGG