Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g04000.t01
CDS Infomation

cds chromosome:12X:10:6774569:6791623:-1 gene:VIT_10s0003g04000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGAAGCAAAGCAGAAGAAGAACGTTCCTGTCCTCCCATGGATGAGAAGCCCTATT
GATGTCAGTCTCTTCGAAGAGTGTCCTCTCCATCTCTTTCCATGTCTCGACCCCAGGTTG
GAGGTGGCTTTGAAGAACATGGGCTTCTCATCACTCTTTCCAGTGCAGGTTGCAGTTTGG
CAAGAGACAGTTGGACCTGGTGCTTTTGAGCGAGACCTTTGTATAAACTCACCAACCGGA
AGTGGGAAAACTTTAGCTTATGCTTTGCCAATAGTGAACGTGCTGTCAAGTCGTGCTGTT
AAGTGTCTACGTGCCTTAGTGGTGTTGCCTACTCGTGATTTGGCGTTGCAGGTTAAAGAA
GTTTTTGCTGCTATTGCACCTGCAGTGGGCTTATCCGTTGGCCTGGCAGTTGGTCAAACT
TCAATTGCTGATGAAATTTCAGAACTTATTAAAAGACCTAAGCTTGAGGCAGGGATCTGT
TATGACCCAGAAGATATTTCACTGGAATTACAAAGTTCAGTAGACATATTGGTGGCAACA
CCTGGAAGGCTGATGGACCATATCAATACCACTAAGGGTTTTACACTTAAGCATCTTCGT
TATCTTGTTGTTGATGAAACAGATAGATTACTCAGGGAGGCATATCAGTCCTGGCTACCT
ACCGTTCTCCAGTTGACTCGCTCTAGTGATGAAAGCCTGTTCCCTTGTGGCAAGACCATT
CTTCCTTCTACATTTGGTTCCATGAACACCATAAGGAGATGTGGTGTTGAAAGGGGGTTT
AAGGGTAGATCTTACCCTAGGCTTGTGAAAATCGTACTATCTGCCACACTAACTCAAGAT
CCAAGCAAGCTTGCTCTGCTTGATCTGCATCATCCTTTGCTTTTGACGGCAGGGCAAAGG
CGTTATCAGCTCCCAGAAAAACTAAAATCTTTTAAGCTGATTTGTGAATCTAAACTTAAA
CCCCTGTATTTGGTTGCCCTTCTAAGGGATTTAGGAGGGGAGAAATGCATTGTTTTCACA
TCATCTGTAGAGTCAGCTCATCGGCTATGTACCTTACTGAATTTTTTTGGTGATTTGCAA
ATCAAGATTGGGGAGTATTCAGGTCTTCAACATCAACGTGTGAGAAGCAAGACTTTGGAG
GAGTTCCGTGGAGGGAAAATACAAGTACTGATTTCCTCTGATGGAATGACCCGTGGAATG
GATGTCGAAGGGGTGAGAAATGTTATTAATTATGATGTGCCTAAATTTATCAAGACGTAT
ATACATCGGGCTGGTCGGACTGCAAGAGCAGGCCAGACTGGTCGTTGCTTCACACTACTG
CGTAAAGATGAGGATAAGCGTTTCAAGCAGCTGTTGCAGAAAGCTGACAGCGACTCATGT
CCTGTTCACTCTGTTGCTTCAAATTCAATTGAGGCACTTCACTCTGTTTACGTTTCTGCA
TTGGAGAAACTGAAAGAGACAGTTGTATCAGAAACAACCAGGAAGCGCAAAATCAATTTC
AAGTCTTCAGGAGCAGATAAAAGAAAACAAGAAAAGCACTTGAAGGAATAG

Peptide Sequence

PEP ID

VIT_10s0003g04000.t01
PEP Infomation

pep chromosome:12X:10:6774569:6791623:-1 gene:VIT_10s0003g04000 transcript:VIT_10s0003g04000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW
QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKE
VFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVAT
PGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTI
LPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQR
RYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQ
IKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTY
IHRAGRTARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSA
LEKLKETVVSETTRKRKINFKSSGADKRKQEKHLKE

Transcript Sequence

Transcript ID

VIT_10s0003g04000.t01
Transcript Infomation

cdna chromosome:12X:10:6774569:6791623:-1 gene:VIT_10s0003g04000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGAGTTTCAGGGAGTTGGGCAGAACGACCTCGTTGGATTCTTGGATGAAAGATCCTGTG
GTTGAAATTGAAGCCGTAGCCGCCGCAGGAGAGAATACAGTATCTAGAAGCTAGCAACCT
CGCTTGAGTTGCCGTGGGAATGAAGGAAGCAAAGCAGAAGAAGAACGTTCCTGTCCTCCC
ATGGATGAGAAGCCCTATTGATGTCAGTCTCTTCGAAGAGTGTCCTCTCCATCTCTTTCC
ATGTCTCGACCCCAGGTTGGAGGTGGCTTTGAAGAACATGGGCTTCTCATCACTCTTTCC
AGTGCAGGTTGCAGTTTGGCAAGAGACAGTTGGACCTGGTGCTTTTGAGCGAGACCTTTG
TATAAACTCACCAACCGGAAGTGGGAAAACTTTAGCTTATGCTTTGCCAATAGTGAACGT
GCTGTCAAGTCGTGCTGTTAAGTGTCTACGTGCCTTAGTGGTGTTGCCTACTCGTGATTT
GGCGTTGCAGGTTAAAGAAGTTTTTGCTGCTATTGCACCTGCAGTGGGCTTATCCGTTGG
CCTGGCAGTTGGTCAAACTTCAATTGCTGATGAAATTTCAGAACTTATTAAAAGACCTAA
GCTTGAGGCAGGGATCTGTTATGACCCAGAAGATATTTCACTGGAATTACAAAGTTCAGT
AGACATATTGGTGGCAACACCTGGAAGGCTGATGGACCATATCAATACCACTAAGGGTTT
TACACTTAAGCATCTTCGTTATCTTGTTGTTGATGAAACAGATAGATTACTCAGGGAGGC
ATATCAGTCCTGGCTACCTACCGTTCTCCAGTTGACTCGCTCTAGTGATGAAAGCCTGTT
CCCTTGTGGCAAGACCATTCTTCCTTCTACATTTGGTTCCATGAACACCATAAGGAGATG
TGGTGTTGAAAGGGGGTTTAAGGGTAGATCTTACCCTAGGCTTGTGAAAATCGTACTATC
TGCCACACTAACTCAAGATCCAAGCAAGCTTGCTCTGCTTGATCTGCATCATCCTTTGCT
TTTGACGGCAGGGCAAAGGCGTTATCAGCTCCCAGAAAAACTAAAATCTTTTAAGCTGAT
TTGTGAATCTAAACTTAAACCCCTGTATTTGGTTGCCCTTCTAAGGGATTTAGGAGGGGA
GAAATGCATTGTTTTCACATCATCTGTAGAGTCAGCTCATCGGCTATGTACCTTACTGAA
TTTTTTTGGTGATTTGCAAATCAAGATTGGGGAGTATTCAGGTCTTCAACATCAACGTGT
GAGAAGCAAGACTTTGGAGGAGTTCCGTGGAGGGAAAATACAAGTACTGATTTCCTCTGA
TGGAATGACCCGTGGAATGGATGTCGAAGGGGTGAGAAATGTTATTAATTATGATGTGCC
TAAATTTATCAAGACGTATATACATCGGGCTGGTCGGACTGCAAGAGCAGGCCAGACTGG
TCGTTGCTTCACACTACTGCGTAAAGATGAGGATAAGCGTTTCAAGCAGCTGTTGCAGAA
AGCTGACAGCGACTCATGTCCTGTTCACTCTGTTGCTTCAAATTCAATTGAGGCACTTCA
CTCTGTTTACGTTTCTGCATTGGAGAAACTGAAAGAGACAGTTGTATCAGAAACAACCAG
GAAGCGCAAAATCAATTTCAAGTCTTCAGGAGCAGATAAAAGAAAACAAGAAAAGCACTT
GAAGGAATAGTTTGTTTCATAAGCAGGAAGTCTTCCTGTAATGAAGTCCATTTTGCAGGA
CATAGGAGCCTAAAAGTTAACATCCTTTCTACTAACTTTTCTCAGAAAGGGGATGTCTAA
GGAAAAAAGAGGACATAGCTCAAAAATGATTTATGCCCTAACCCTAGTTTGGGTAGAAGA
AACAAGGAATTACATCAAACAAAACTAACGGTTTATGTTTTTTCAATTGATATTGAAAAA
TATGAAACTACAACGCAACTTCTTGTTTTTATTACACGATTTGCTGATACAAAAGGGTGT
ATCTACAGCATCAGCAAAGCTTAGTCTTCAACCCATTGCCCAGAACTAAAAGAGAGCACA
TTGATTTGTAGAAAAAAGGAGTACGGCCTTCCAAAAAAAAACCCATTGAGATTTTTGATG
AAAAAAAAGGGTACTACCCTCTGAAATCAGTGACTTCTCGTGAAAATAGAAAACAGTGCA
TCCGTTTGCAACAAAGGATTGTAGTTACTGAAGATGGAAAAAGGTCTTTGAACCTCTTCG
GAAAAAGTAATTAGAATTAGCAGCAGCAGCAGCAGCAGCAGGAGGTGCTGTCTTTGAAGC
CGAATTGCTTGTGCTGATATCTCTCTCTTCTTCAGTAATTGTATCTAACATCTTTGTGGC
TCTGTGCCTCATGACAGTGATGAATTGGGGTGGTGCAACCTCCATAGCAAACCTAGCAAC
TCGAGAACTTGCCATGAGGTTGGGTACTGGAAGATAATAGGAAGAGAAGAGGTGAAAAGA
GAACTGCAGCAGGAGAAGAGATTGGGAAGGCAAGAAAGCAGTTATGGATGAGCAAGAAGC
ATGCACCATTTGGGTACGATTTATAAGTAAATTTTTTGGCTGAAAATAATTCACGAGTCA
TGGTCAATTAGTATTAATCA