Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g03980.t01
CDS Infomation

cds chromosome:12X:10:6739876:6748016:1 gene:VIT_10s0003g03980 gene_biotype:protein_coding transcript_biotype:protein_coding description:ALA-interacting subunit [Source:UniProtKB/TrEMBL;Acc:D7TKB5]
Sequence

ATGGATGCAGATGGAGGGAGTGCCTCAGCGGTTGGTATTGAAGGCCGACCAGTTTCCCTC
CATTCAGGGCAGCCAAGAGCTCTATATCAATTTACACAGCAGAGTCTCCCAGCATGTAAA
CCTGTATTGACACCAGGATGGGTTATTGCCACGTTTTTGTTGATCGGTGCCATTTTTATT
CCTGTTGGTCTTGTTTCTCTCCATGCCTCACAAAATGTTGTAGAAATTGTAGAACGTTAT
GATGCTGAATGTATACCAGAAAAGTACCAAAGCAACAAGGTTGCTTATATCAGAGATAGC
TCAATTCCCAAAAACTGTACTCGGTACTTAAAGGTGCACAAACATATGAAAGCTCCGATT
TCCGTCTACTACCAACTTGATAACTTCTATCAGAACCACCGCCGGTATGTCAAAAGCAGA
AGCGATCAGCAGCTCCTGCATGGACTGAAGTACAATGACACAAGTTCCTGTAAACCTGAA
CAATTGAACAATGGTCTCCCAATTGTCCCTTGTGGGTTGATAGCTTGGAGTTTGTTTAAT
GACACATTTAACTTTGTCCGAAGGTCAGAGGAAATGAAAATTAACAGGAAAAACATTGCA
TGGAAGAGTGACCGGGATCACAAATTTGGCAAGGAAGTGTATCCCTTCAATTTCCAGAAT
GGGACTTTGATTGGAGGTGGAAAGCTAGATCCAAGGATTCCTCTGAGCGATCAAGAGGAT
CTTATTGTATGGATGCGTACTGCAGCACTCCCTAGCTTCCGAAAGTTATATGGAAGAATT
GAAGAGGATATAGATGCAGATGATGTTATTGTTGTTCACCTCAGTAACAACTACAACACG
TACAGTTTTGGTGGGAAGAAAAAGCTTGTTCTTTCCACATCCTCTTGGTTGGGAGGAAAG
AATAACTTCCTTGGGATAGCATACATTTTTGTTGGTTCTTCCTGTATATTCACGTCAATT
GTCTTCATGTTGCTTCATGTGAAAAACCCGAGGTAA

Peptide Sequence

PEP ID

VIT_10s0003g03980.t01
PEP Infomation

pep chromosome:12X:10:6739876:6748016:1 gene:VIT_10s0003g03980 transcript:VIT_10s0003g03980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ALA-interacting subunit [Source:UniProtKB/TrEMBL;Acc:D7TKB5]
Sequence

MDADGGSASAVGIEGRPVSLHSGQPRALYQFTQQSLPACKPVLTPGWVIATFLLIGAIFI
PVGLVSLHASQNVVEIVERYDAECIPEKYQSNKVAYIRDSSIPKNCTRYLKVHKHMKAPI
SVYYQLDNFYQNHRRYVKSRSDQQLLHGLKYNDTSSCKPEQLNNGLPIVPCGLIAWSLFN
DTFNFVRRSEEMKINRKNIAWKSDRDHKFGKEVYPFNFQNGTLIGGGKLDPRIPLSDQED
LIVWMRTAALPSFRKLYGRIEEDIDADDVIVVHLSNNYNTYSFGGKKKLVLSTSSWLGGK
NNFLGIAYIFVGSSCIFTSIVFMLLHVKNPR

Transcript Sequence

Transcript ID

VIT_10s0003g03980.t01
Transcript Infomation

cdna chromosome:12X:10:6739876:6748016:1 gene:VIT_10s0003g03980 gene_biotype:protein_coding transcript_biotype:protein_coding description:ALA-interacting subunit [Source:UniProtKB/TrEMBL;Acc:D7TKB5]
Sequence

GCACTTGTCTTCATCACTCTCCTTCGGATTCTGCAGAGCTTGCTTCTCTTCAAGCCTGGA
ATCAAATCTAGATTCCCGTTTCCTCTCCATCCAAGCAATCCAATCTCTCTCTCTACCTTT
TTTTTTTTCCTATGATCCGGTTCTAATCGGACCGGTCAAAGTCAGGAATCAATGAAAAAT
TTGAGTTGATTTTCCTGGTGCGATTCTTTGCTCTCTGTTAGCCTACTGAAAAAATACGGG
GAAACAAGAGAGATTGAAATGTGGTTGTAGAGAAAAGGGAGCGGACGTCACTAATTGACC
CCTGATGCCCTTATTTCGTCAATCGAGGGATTTCCCTTGTTGCAATTGTCACTAGGACTG
AAATTTTGGGGGCAGCACTGGTTGAGCTGAAATTTGGAATCAATGGATGCAGATGGAGGG
AGTGCCTCAGCGGTTGGTATTGAAGGCCGACCAGTTTCCCTCCATTCAGGGCAGCCAAGA
GCTCTATATCAATTTACACAGCAGAGTCTCCCAGCATGTAAACCTGTATTGACACCAGGA
TGGGTTATTGCCACGTTTTTGTTGATCGGTGCCATTTTTATTCCTGTTGGTCTTGTTTCT
CTCCATGCCTCACAAAATGTTGTAGAAATTGTAGAACGTTATGATGCTGAATGTATACCA
GAAAAGTACCAAAGCAACAAGGTTGCTTATATCAGAGATAGCTCAATTCCCAAAAACTGT
ACTCGGTACTTAAAGGTGCACAAACATATGAAAGCTCCGATTTCCGTCTACTACCAACTT
GATAACTTCTATCAGAACCACCGCCGGTATGTCAAAAGCAGAAGCGATCAGCAGCTCCTG
CATGGACTGAAGTACAATGACACAAGTTCCTGTAAACCTGAACAATTGAACAATGGTCTC
CCAATTGTCCCTTGTGGGTTGATAGCTTGGAGTTTGTTTAATGACACATTTAACTTTGTC
CGAAGGTCAGAGGAAATGAAAATTAACAGGAAAAACATTGCATGGAAGAGTGACCGGGAT
CACAAATTTGGCAAGGAAGTGTATCCCTTCAATTTCCAGAATGGGACTTTGATTGGAGGT
GGAAAGCTAGATCCAAGGATTCCTCTGAGCGATCAAGAGGATCTTATTGTATGGATGCGT
ACTGCAGCACTCCCTAGCTTCCGAAAGTTATATGGAAGAATTGAAGAGGATATAGATGCA
GATGATGTTATTGTTGTTCACCTCAGTAACAACTACAACACGTACAGTTTTGGTGGGAAG
AAAAAGCTTGTTCTTTCCACATCCTCTTGGTTGGGAGGAAAGAATAACTTCCTTGGGATA
GCATACATTTTTGTTGGTTCTTCCTGTATATTCACGTCAATTGTCTTCATGTTGCTTCAT
GTGAAAAACCCGAGGTAAAACTTCATATGTCCAGTATGAATGATTGAATTCCTCCCTTAT
TCGTCTTTTGTTGCATGAAATTTAAATACCATAAA