Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g03490.t01
CDS Infomation

cds chromosome:12X:10:5846605:5848332:1 gene:VIT_10s0003g03490 gene_biotype:protein_coding transcript_biotype:protein_coding description:GA2ox2 [Source:UniProtKB/TrEMBL;Acc:D7TK65]
Sequence

ATGGTTGTGTTATCGCAGAATGGTCGTCAGCAGTTGCCTCTGATCAAGGCATGCAAGCCC
AATTATGGCTTCACTGGAATTCCTGTGATTGACATGACAAGCCCTCACGCCAAGGCTCAC
ATGGTTGAGGCCTGTGAGGAGTTTGGATTCTTCAAGCTGGTCAATCATGGAGTTCCAATG
GAGTTCATGTCCAGATTGGAGGATGAGGGTATCAAGTTCTTTAGCCTGCCTCAGTCTGAG
AAGGACCTGGCTGGTCCTCCTCAGCCTTTTGGGTATGGCAACAGGAGAATTGGCCCCAAC
GGTGATGTAGGGTGGATTGAGTATCTCCTCCTCTCCACCAATCCGGATTCCATTTCCCAG
ATATGCTCCTCCATTTCCCCGGAAAACCCTGAAATTTTCGGGTCTGCAGTGGTTGATTAT
GTGTCATCCGTGAAGAACATGACATATGAAGTGCTGGAAATGATAGCTGAAGGGCTGAAC
ATAGAACCAAGGAATGTGCTGAGCAGGCTTCTCAAGGACGAGGAGAGCGACTCCTGCTTC
AGGGTCAACCACTATCCACCATGCCCAGAGCTTGAAGCATTGCGCGGCCGAGTTTTGGTT
GGATTCGGAGAGCACACAGACCCACAGATAATATCTGTGCTCAGGTCCAACAACACCAAT
GGCCTGGAAATATGTCTCAAGGATGGGACTTGGGTCTCAGTCCCACCTGACCAGGACTCC
TTTTTCATCAATGTTGGTGACTCTCTTCAGGTGATGACCAACGGGAAGTTTAAGAGCGTG
AAGCATAGAGTTGTGACAGAGAGCAGGAAGGCCAGAGTGTCAATGATCTACTTTGGAGGG
CCACCTTTAACTGAAATCATAGCACCTTTACCCTCACTGGTGAAAGAAGGAGAAGAAACT
CTGTACAAGGAGTTCACATGGGCTGACTACAAAAAATCTGTTTATAAATCAAGGCTGGCT
GATAACAGGCTTGGGCTCTTTGAGAAAAAAGAGCAGCCATGA

Peptide Sequence

PEP ID

VIT_10s0003g03490.t01
PEP Infomation

pep chromosome:12X:10:5846605:5848332:1 gene:VIT_10s0003g03490 transcript:VIT_10s0003g03490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GA2ox2 [Source:UniProtKB/TrEMBL;Acc:D7TK65]
Sequence

MVVLSQNGRQQLPLIKACKPNYGFTGIPVIDMTSPHAKAHMVEACEEFGFFKLVNHGVPM
EFMSRLEDEGIKFFSLPQSEKDLAGPPQPFGYGNRRIGPNGDVGWIEYLLLSTNPDSISQ
ICSSISPENPEIFGSAVVDYVSSVKNMTYEVLEMIAEGLNIEPRNVLSRLLKDEESDSCF
RVNHYPPCPELEALRGRVLVGFGEHTDPQIISVLRSNNTNGLEICLKDGTWVSVPPDQDS
FFINVGDSLQVMTNGKFKSVKHRVVTESRKARVSMIYFGGPPLTEIIAPLPSLVKEGEET
LYKEFTWADYKKSVYKSRLADNRLGLFEKKEQP

Transcript Sequence

Transcript ID

VIT_10s0003g03490.t01
Transcript Infomation

cdna chromosome:12X:10:5846605:5848332:1 gene:VIT_10s0003g03490 gene_biotype:protein_coding transcript_biotype:protein_coding description:GA2ox2 [Source:UniProtKB/TrEMBL;Acc:D7TK65]
Sequence

TCTCTCTCATGCATTAGCATCCTCACCCATTTTGCCCATTAAAAGCATCAATCTCATCAC
CCACCAACGCAAACTCCCTACCCCATCTCCCTCCTTCTCATCTCTCTGTTTGAACAGAGC
ACAGAGCAGAGCAATCATGGTTGTGTTATCGCAGAATGGTCGTCAGCAGTTGCCTCTGAT
CAAGGCATGCAAGCCCAATTATGGCTTCACTGGAATTCCTGTGATTGACATGACAAGCCC
TCACGCCAAGGCTCACATGGTTGAGGCCTGTGAGGAGTTTGGATTCTTCAAGCTGGTCAA
TCATGGAGTTCCAATGGAGTTCATGTCCAGATTGGAGGATGAGGGTATCAAGTTCTTTAG
CCTGCCTCAGTCTGAGAAGGACCTGGCTGGTCCTCCTCAGCCTTTTGGGTATGGCAACAG
GAGAATTGGCCCCAACGGTGATGTAGGGTGGATTGAGTATCTCCTCCTCTCCACCAATCC
GGATTCCATTTCCCAGATATGCTCCTCCATTTCCCCGGAAAACCCTGAAATTTTCGGGTC
TGCAGTGGTTGATTATGTGTCATCCGTGAAGAACATGACATATGAAGTGCTGGAAATGAT
AGCTGAAGGGCTGAACATAGAACCAAGGAATGTGCTGAGCAGGCTTCTCAAGGACGAGGA
GAGCGACTCCTGCTTCAGGGTCAACCACTATCCACCATGCCCAGAGCTTGAAGCATTGCG
CGGCCGAGTTTTGGTTGGATTCGGAGAGCACACAGACCCACAGATAATATCTGTGCTCAG
GTCCAACAACACCAATGGCCTGGAAATATGTCTCAAGGATGGGACTTGGGTCTCAGTCCC
ACCTGACCAGGACTCCTTTTTCATCAATGTTGGTGACTCTCTTCAGGTGATGACCAACGG
GAAGTTTAAGAGCGTGAAGCATAGAGTTGTGACAGAGAGCAGGAAGGCCAGAGTGTCAAT
GATCTACTTTGGAGGGCCACCTTTAACTGAAATCATAGCACCTTTACCCTCACTGGTGAA
AGAAGGAGAAGAAACTCTGTACAAGGAGTTCACATGGGCTGACTACAAAAAATCTGTTTA
TAAATCAAGGCTGGCTGATAACAGGCTTGGGCTCTTTGAGAAAAAAGAGCAGCCATGAAT
CATGATGGAGTCAATTTCCCCATTTTAGGAAAACCTATGGTTTTGTCAAAG