Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g02590.t01
CDS Infomation

cds chromosome:12X:10:4543811:4571056:-1 gene:VIT_10s0003g02590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCTTTGAGAAAACAAGCCAGCAAGTTTAGGGAGCAGGTTGCCAAACAGCAACAG
GCTGTTATAAAACAGTTCGGTGGGACTGGTTATGAAAGTTCAGATGTAATGGTTATAGAT
GAGGTTGAGATGCAGAGACATCAACAATTAGAGAAACTGTACAGGTCTACACGTGCAGGA
AAGGATTTTCAGAAAGATATTGTTAGAGCAGGGGAAGCATTCACAGCCATAGGATATAAA
CAAATCGAAACAGGAACAAAGTTGTCTGAGGATTGCTGCAGATATGGTGCTGAAAACATC
AATGATAACATTCTAGCTAGGGCTGCATCTATATATGGTGATGGTCTTAAACATATAGCA
AAAGAGCAAGAAGACTTGAACAAACTGTTATCTTCACAGATTTTAGATCCTTTGAGAGCA
ATGGTCACTGGTGCTCCTTTGGAAGATGCCCGTCATCTAGCTCAACGTTATAGCCGAATG
AGACATGAAGCTGAGACACAGGCAGCTGAGGTTTCTAGAAGACAAGCTCGACTAAGAGAA
GCTCCAAATCCAGAAAATGCTGCAAGGCTAAATATAGCAGAAGCTAAAATGAAAGAATTG
AAAGCAAATATGGCAGTTTTGGGTAAAGAAGCAGCAGCTGCATTGGCTGCTGTTGAAGCA
CAACAGCAAAGGCTTAGTTTCCAGAGGCTTGTTGCAATGGTTGAGGGAGAAAGGACTTAT
CATCAGAGAATAGCTACCATTTTTGGTGAAGTTGAATCTGAGATGGTCTCGGAAAAACAA
AGGAAAGAATCTGCTCCTCCTGCCATTCCATCAGAGAGCCACTCAGAGAAGACGATGTAC
TTCTTGGCTGAAGCAATGCATGCTTTCAGTGCAGCATCAGAGAAGGAACTGAGCCTGAAT
GTGGGAGACTATGTCGTTGTCCGGAAGGTGAGCCATACAGGATGGTCAGAAGGAGAATGC
AAAGGTAAAGCAGGCTGGTTTCCATCAGAGTACGTGGCAAAACGTCAAAGGCTTCCCACC
AGTAATGTGGCTGCTGAAGTTTACTAA

Peptide Sequence

PEP ID

VIT_10s0003g02590.t01
PEP Infomation

pep chromosome:12X:10:4543811:4571056:-1 gene:VIT_10s0003g02590 transcript:VIT_10s0003g02590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDALRKQASKFREQVAKQQQAVIKQFGGTGYESSDVMVIDEVEMQRHQQLEKLYRSTRAG
KDFQKDIVRAGEAFTAIGYKQIETGTKLSEDCCRYGAENINDNILARAASIYGDGLKHIA
KEQEDLNKLLSSQILDPLRAMVTGAPLEDARHLAQRYSRMRHEAETQAAEVSRRQARLRE
APNPENAARLNIAEAKMKELKANMAVLGKEAAAALAAVEAQQQRLSFQRLVAMVEGERTY
HQRIATIFGEVESEMVSEKQRKESAPPAIPSESHSEKTMYFLAEAMHAFSAASEKELSLN
VGDYVVVRKVSHTGWSEGECKGKAGWFPSEYVAKRQRLPTSNVAAEVY

Transcript Sequence

Transcript ID

VIT_10s0003g02590.t01
Transcript Infomation

cdna chromosome:12X:10:4543811:4571056:-1 gene:VIT_10s0003g02590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAGGAAGCTGTCAGATCTAACGTCTCTGTAACCCAGAAATATTCATTCCAATCCTTATT
GTTTGAATCCGGTCTCATTCCCTCTGGTTTGGGGGCGAGCCCAAAAACACCAGAACAACA
ATGGATGCTTTGAGAAAACAAGCCAGCAAGTTTAGGGAGCAGGTTGCCAAACAGCAACAG
GCTGTTATAAAACAGTTCGGTGGGACTGGTTATGAAAGTTCAGATGTAATGGTTATAGAT
GAGGTTGAGATGCAGAGACATCAACAATTAGAGAAACTGTACAGGTCTACACGTGCAGGA
AAGGATTTTCAGAAAGATATTGTTAGAGCAGGGGAAGCATTCACAGCCATAGGATATAAA
CAAATCGAAACAGGAACAAAGTTGTCTGAGGATTGCTGCAGATATGGTGCTGAAAACATC
AATGATAACATTCTAGCTAGGGCTGCATCTATATATGGTGATGGTCTTAAACATATAGCA
AAAGAGCAAGAAGACTTGAACAAACTGTTATCTTCACAGATTTTAGATCCTTTGAGAGCA
ATGGTCACTGGTGCTCCTTTGGAAGATGCCCGTCATCTAGCTCAACGTTATAGCCGAATG
AGACATGAAGCTGAGACACAGGCAGCTGAGGTTTCTAGAAGACAAGCTCGACTAAGAGAA
GCTCCAAATCCAGAAAATGCTGCAAGGCTAAATATAGCAGAAGCTAAAATGAAAGAATTG
AAAGCAAATATGGCAGTTTTGGGTAAAGAAGCAGCAGCTGCATTGGCTGCTGTTGAAGCA
CAACAGCAAAGGCTTAGTTTCCAGAGGCTTGTTGCAATGGTTGAGGGAGAAAGGACTTAT
CATCAGAGAATAGCTACCATTTTTGGTGAAGTTGAATCTGAGATGGTCTCGGAAAAACAA
AGGAAAGAATCTGCTCCTCCTGCCATTCCATCAGAGAGCCACTCAGAGAAGACGATGTAC
TTCTTGGCTGAAGCAATGCATGCTTTCAGTGCAGCATCAGAGAAGGAACTGAGCCTGAAT
GTGGGAGACTATGTCGTTGTCCGGAAGGTGAGCCATACAGGATGGTCAGAAGGAGAATGC
AAAGGTAAAGCAGGCTGGTTTCCATCAGAGTACGTGGCAAAACGTCAAAGGCTTCCCACC
AGTAATGTGGCTGCTGAAGTTTACTAAGCTGTACTCCATGCTCAGCTGGTCAGCACCCCA
AGACTGGATGCACTGTATTATGTTGGGGGTAAACTGTTGGATTTTTTCTACATTGTGTCT
ATTTTTGTTATGCTCTTCTAGGCACTGATTATTGCAAAGACATACCTTTTCAGATTTGTT
TTTCAATTCTTTTATATTAACTTTCAAGACAGTAGTCATGGTTGCTGAAACAATCTTTTT
ATAAAATAATGAAGCAGTGT