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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g02480.t01
CDS Infomation

cds chromosome:12X:10:4429983:4431226:-1 gene:VIT_10s0003g02480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HMF7]
Sequence

ATGCAACTCAAGCTTGTTTCTGGAAATTCTGCAGGCACCGTCACTGCATACTATTTATCT
TCTCAAGGCCCAACACACGACGAGATTGATTTTGAGTTCTTGGGGAACCTTAGCGGAGAC
CCGTATATTCTCCATACTAATGTGTTTACGCAAGGGAAAGGGAATAGAGAGCAGCAGTTC
TACCTCTGGTTTGACCCAACAGAAAATTTTCACACCTACTCTATTATATGGAACCTCCAA
AACATCATCTTCCTAGTAGACAACATCCCAATCAGAGAATTCAAGAATCAAGAATCCATT
GGAGTTCCCTTCCCAAAGTCCCAACCCATGAGGATTTACTCAAGCCTGTGGAATGCTGAT
GACTGGGCAACAAGAGGCGGCCTCGTGAAAATCGATTGGTCTAAGGCTCCCTTCACAGCC
TCCTATAGAAACTTCAATGCTGCAGCCTGCCTGTGGTCTCATGGTTCATCATCCTGTGCT
TCCAAGTTTACGAGTCCAGTCTCAAATATTGCATGGCAGAACCAAGGATTGGATGCAAAA
AGCCGAAGAAAACTTCAATGGGTGCAGAAGAATTACATGATATACAACTATTGTAGTGAT
ATGAAGCGCTTCCCTGGGGGTCTCCCACTGGAATGTCGACATTAA

Peptide Sequence

PEP ID

VIT_10s0003g02480.t01
PEP Infomation

pep chromosome:12X:10:4429983:4431226:-1 gene:VIT_10s0003g02480 transcript:VIT_10s0003g02480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HMF7]
Sequence

MQLKLVSGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFTQGKGNREQQF
YLWFDPTENFHTYSIIWNLQNIIFLVDNIPIREFKNQESIGVPFPKSQPMRIYSSLWNAD
DWATRGGLVKIDWSKAPFTASYRNFNAAACLWSHGSSSCASKFTSPVSNIAWQNQGLDAK
SRRKLQWVQKNYMIYNYCSDMKRFPGGLPLECRH

Transcript Sequence

Transcript ID

VIT_10s0003g02480.t01
Transcript Infomation

cdna chromosome:12X:10:4429983:4431226:-1 gene:VIT_10s0003g02480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HMF7]
Sequence

TTCATCAATGCTTTTATTTTCTGTCTTTGTTAGTTCAATTATGGCTGCTTCTGCAGGTAG
TTTCTACCAAGACTTCGACTTAACCTGGGGTGATCATCGTGCAAAAATACTGGATGGAGA
AAAGCTTCTCACTCTTTCTCTTGATAAGGCCTCCGGCTCGGGCTTCCAATCCAAAAAGGA
GTATCTGTTTGGAAAGATTGACATGCAACTCAAGCTTGTTTCTGGAAATTCTGCAGGCAC
CGTCACTGCATACTATTTATCTTCTCAAGGCCCAACACACGACGAGATTGATTTTGAGTT
CTTGGGGAACCTTAGCGGAGACCCGTATATTCTCCATACTAATGTGTTTACGCAAGGGAA
AGGGAATAGAGAGCAGCAGTTCTACCTCTGGTTTGACCCAACAGAAAATTTTCACACCTA
CTCTATTATATGGAACCTCCAAAACATCATCTTCCTAGTAGACAACATCCCAATCAGAGA
ATTCAAGAATCAAGAATCCATTGGAGTTCCCTTCCCAAAGTCCCAACCCATGAGGATTTA
CTCAAGCCTGTGGAATGCTGATGACTGGGCAACAAGAGGCGGCCTCGTGAAAATCGATTG
GTCTAAGGCTCCCTTCACAGCCTCCTATAGAAACTTCAATGCTGCAGCCTGCCTGTGGTC
TCATGGTTCATCATCCTGTGCTTCCAAGTTTACGAGTCCAGTCTCAAATATTGCATGGCA
GAACCAAGGATTGGATGCAAAAAGCCGAAGAAAACTTCAATGGGTGCAGAAGAATTACAT
GATATACAACTATTGTAGTGATATGAAGCGCTTCCCTGGGGGTCTCCCACTGGAATGTCG
ACATTAATTCAGGTTCTCTTTAGAAAGAATATGTTGCTTCCTTTCGTACTTTGTAAGAAT
CTATTAATGGTGGAAGGCTCGTTAGTGGGCTCCTTCGTTGTAATAATTCTATTAGGAGGT
TTCGTAACTCATTAAAATAAATCAAATTCTTCCAATCAACCTTCATGGTGTTT