Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g02200.t01
CDS Infomation

cds chromosome:12X:10:3967322:3973350:1 gene:VIT_10s0003g02200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGGAAGAAATCGCGGGCCTCCGATGCCAATCAAGGGTGGTTTGCATGAACCTCCG
TTCCGCGGCAGGGGCCTTGGTCCAATGCCCCATCCCGCACTCCTCGATGAACCTCAATTT
GGGCGTGGAGCAGGTGGTCCTCGTCCTGGCACCCTGATCCCTCATCCGGCAGCAATATTT
GAGGACCGCCTTGCCCTGCAGCACCAAGACATCCAAGCCCTTCTGATTGATAATCAGAGG
CTTGCTGCAACGCATGTTGCACTAAAGCAAGAAGTGGAGGCTGCCCAGCATGAGATAAAG
CGAATGGCTCATGTTGCTGCTTCTGCTCAGACTGAGATGGATTTACAGTTGAGGGAAGCT
TTTGAGAAAGTGATGAAATTGGAAGCAGATCTTCGGGCCTCAGATGCCATGAGGGCAGAG
GTAATGCAGGTTCGGGCAGATATTCAACAGCTGACTGCAGCACGGCAAGAGTTGACCAGC
CAGGCTGAAGGACTGAGTCAGGATTTGAATAGAGCTAATTTGGATTTACAGCAGGTACCT
TTGCTGAAGGGGGAGATTGAGGGCATGAGGCAAGAGTTGCAGCGGGCGAGGGCTGCCATT
GAGTATGAAAAGAAAGGGTATGCTGAAAATTATGAGCATGGTCAGGCAATGGAGAAGAAT
CTGATAGCAATGGCTCGTGAAATGGAAAAGTTGCGTGCGGAGTTGGCTAATGCTGAAAAG
CGAGCACGTGCCGCTGCTGCTGTTGGGAATCAGATTTATGGCGGAAGTTATGGAAATCCC
GAGACTGGATATGGAGGAAATCCTTATCCAGCTGGTTATGGCATGAATCCTGGACAAGGC
AGTGCAGAAGGTGTTCCTCAATATGGACCTGGTCCTGGTTCGTGGGGCACATATGACATG
CAGCGGGCTCATGGACACAGATAA

Peptide Sequence

PEP ID

VIT_10s0003g02200.t01
PEP Infomation

pep chromosome:12X:10:3967322:3973350:1 gene:VIT_10s0003g02200 transcript:VIT_10s0003g02200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGRNRGPPMPIKGGLHEPPFRGRGLGPMPHPALLDEPQFGRGAGGPRPGTLIPHPAAIF
EDRLALQHQDIQALLIDNQRLAATHVALKQEVEAAQHEIKRMAHVAASAQTEMDLQLREA
FEKVMKLEADLRASDAMRAEVMQVRADIQQLTAARQELTSQAEGLSQDLNRANLDLQQVP
LLKGEIEGMRQELQRARAAIEYEKKGYAENYEHGQAMEKNLIAMAREMEKLRAELANAEK
RARAAAAVGNQIYGGSYGNPETGYGGNPYPAGYGMNPGQGSAEGVPQYGPGPGSWGTYDM
QRAHGHR

Transcript Sequence

Transcript ID

VIT_10s0003g02200.t01
Transcript Infomation

cdna chromosome:12X:10:3967322:3973350:1 gene:VIT_10s0003g02200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TATACAGAGTTTCTCTCTTTCTCTCTCGCGGCTGGAGAATTCTCACGAGAGGCTTTGCAG
AGCAAATATGTCTGGAAGAAATCGCGGGCCTCCGATGCCAATCAAGGGTGGTTTGCATGA
ACCTCCGTTCCGCGGCAGGGGCCTTGGTCCAATGCCCCATCCCGCACTCCTCGATGAACC
TCAATTTGGGCGTGGAGCAGGTGGTCCTCGTCCTGGCACCCTGATCCCTCATCCGGCAGC
AATATTTGAGGACCGCCTTGCCCTGCAGCACCAAGACATCCAAGCCCTTCTGATTGATAA
TCAGAGGCTTGCTGCAACGCATGTTGCACTAAAGCAAGAAGTGGAGGCTGCCCAGCATGA
GATAAAGCGAATGGCTCATGTTGCTGCTTCTGCTCAGACTGAGATGGATTTACAGTTGAG
GGAAGCTTTTGAGAAAGTGATGAAATTGGAAGCAGATCTTCGGGCCTCAGATGCCATGAG
GGCAGAGGTAATGCAGGTTCGGGCAGATATTCAACAGCTGACTGCAGCACGGCAAGAGTT
GACCAGCCAGGCTGAAGGACTGAGTCAGGATTTGAATAGAGCTAATTTGGATTTACAGCA
GGTACCTTTGCTGAAGGGGGAGATTGAGGGCATGAGGCAAGAGTTGCAGCGGGCGAGGGC
TGCCATTGAGTATGAAAAGAAAGGGTATGCTGAAAATTATGAGCATGGTCAGGCAATGGA
GAAGAATCTGATAGCAATGGCTCGTGAAATGGAAAAGTTGCGTGCGGAGTTGGCTAATGC
TGAAAAGCGAGCACGTGCCGCTGCTGCTGTTGGGAATCAGATTTATGGCGGAAGTTATGG
AAATCCCGAGACTGGATATGGAGGAAATCCTTATCCAGCTGGTTATGGCATGAATCCTGG
ACAAGGCAGTGCAGAAGGTGTTCCTCAATATGGACCTGGTCCTGGTTCGTGGGGCACATA
TGACATGCAGCGGGCTCATGGACACAGATAATTTTGGTGCATGCTATGCTAAGCTTTGGT
TCCCTCTATAAGTTCACCTCCATAATGGTATCTTGCGATGGAGTTGCTAAATACGTGGAT
TCTTACTGTAGGTTGATGGCATATATGTCATTAGAACTATTTAACATTGATCATACGAGT
GCTCACAGTAAAATATATGATTTTACCATATGATCAATGTAATGGTATTTTGACCTCGAT
TGGATGCTTTGTGATGTAACTGTTTAAATCCAGTATCTTATTATTTTATTTTATTTTATG
CAGTATCTTG