Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g01730.t01
CDS Infomation

cds chromosome:12X:10:3197007:3199895:1 gene:VIT_10s0003g01730 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HMC1]
Sequence

ATGGCCTCCGCTGCGATAGTATCGTCTCTGCGGCGGCGGAGATCGCCGTCTTTGGAGGCT
TTCTTGGCGCCGGTGGATCTAAACGAGGTGGCTCTTGTACGGACACTGGCCACCATCTCC
ATGGAGCTTATATTTGCGTTTTCCGATAGGCCTTGGCCGTTTCAGCGCAAGAATTCGAGG
TCCTTGATTCGGAAAATTGAGGTCTTTCTGGTGCTGTTAGAGTTCCTGAGGGATTGCAAT
TTGAGTCTGCCTTCGGCGGCGGTGCTTTGCTTCAAGGAGCTTTACCTGCTTCTGTATCGG
TCGAAGATACTTCTCGATTATTGCTTGCAATCAAGTAAATTGTGGCTTCTGTTGCAGAAC
CAGTCGATTTCGGGGCATTTTCATGATCTTAATCAGGAAATTTCGACGCTGTTGGATGTA
TTTCCGATGGAGGAACTTGAATTGACTGAAGATATAAGGGAGCAGCTTGAGCTTTTGCAG
AAACAGGTGAGGAGGGCGAAGTTGTTTCTTGATAAGAATGATGAGGGGTTGAGGCTGAGG
TTGTATTCTTTTCTTGATGACTTTGGGAGTGGGCGGATTCCTGATCCAGTGGAGCTGCGG
TTGTTTTTTGTGGATAGATTAGGGATTCGGGATGCGAAGAGTTGTAGGGCTGAAATTGAG
TTTTTGGAGGAGCAGATTTATAGTCACGAGGGAGATGTTGAGCCGAATGAGAGCGAGGTA
GAAATGAGTTTTGGGATTAAGAAGCCGAGGAAAGGGTTGATTACTCAAGAAATTGGGGAT
ACCTTCATAACAGTCCCCAAGGACTTTTGTTGCCCCATATCTTTGGATGTGATGCGAGAC
CCAGTAATAATTTCAACAGGACAGACATATGATCGAACTTCAATATCAAGGTGGATGGAA
GAAGGGCATTGTAGTTGCCCAAAGACAGGGCAGATGCTTGCTCACCCTCGCCTTGTTCCC
AATCGAGCTCTCAGGAATTTGATCACACAATGGTGCACTGCTTATGGAATCACCTTGGAT
CCACCAGACAGCCCAGATAGTGTTGTAGAAACTTTTGCAGCAGCTTTGCCAACCAAAGCT
GCTATTGAAGCCAACAAAGCCACAGCAGCGCTTCTCGTCCAACAGCTTGCAAGTGGTTCA
CAGGGTGCAAAGACTGTAGCTGCCCGTGAGATACGTTTATTAGCAAAAACAGGGAAGGAA
AACCGTGCGTATATAGCAGAAGCTGGGGCAATCCCCCATCTTCTCAAGCTACTCTCATCT
CCAAATTCTGTCGCACAAGAGAATTCTGTAACGGCAATGCTTAACCTATCAATATATGAC
AAGAACAAAAGCCGAATTATGGATGAGGATGGGTGTTTAGGTTTGATTGTTGAAGTTCTG
ATATTTGGGCACACAACGGAAGCAAGGGAAAATGCAGCTGCGACATTGTTCAGCCTTTCT
GCTGTTCATGATTATAAGAAGAGAATAGCGGACGAGGGTGGGGCAGTTGAAGCCCTGGCA
GGGCTGTTGAGAGAGGGAACCCCAAGAGGAAGGAAAGATGCTGTAACGGCTCTATTTAAT
CTATCAACCCACACAGATAATTGTGCCAGAATGGTAGCGTCAGGGGCTGTAACTGCATTA
GTAGCGGCCTTGGGAACTGAGGGGGTTGCAGAGGAAGCAGCGGGAGCATTGGCCTTGATT
GTTAGGCGGCCAATTGGGGCTGAAGCAGTAGGGAGGGAGGAAATGGCAGTGGCTGGGTTA
TTAGGAATGATGCGGTGTGGGACTCCAAGGGGGAAAGAGAATGCAGTTGCAGCATTGCTT
GAACTGTGCAGAAGTGGCGGGACAGCTGCAACAGAAAGGGTCCTTAAGGCTCCAGCGCTG
GCTGGTTTGCTTCAGACTCTGTTGTTTACAGGTACAAAGCGCGCTAGGAGAAAGGCTGCA
TCCCTTGCCAGAGTTTTCCAGAGGTGTGAGAATGCAGCCTTGCATTTTGGTGGACTTGGT
GTAGGGTATGCATTTGCCAGAAACTCATCTGCAAATACCGATGCAAGCTTTTCTAGTGAG
GTTTCCATGCAAATGCCCATTTCAGTGCCTTTTCATTTTCTGCTATATTTTGTAATGCCC
AATTACTTGACAAATCAGAATGAGGAATTCTCTAAAAATGGTCAAGTTGGTAATAGTATA
ATGTGGAAAAGCTGCTTTTAG

Peptide Sequence

PEP ID

VIT_10s0003g01730.t01
PEP Infomation

pep chromosome:12X:10:3197007:3199895:1 gene:VIT_10s0003g01730 transcript:VIT_10s0003g01730.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HMC1]
Sequence

MASAAIVSSLRRRRSPSLEAFLAPVDLNEVALVRTLATISMELIFAFSDRPWPFQRKNSR
SLIRKIEVFLVLLEFLRDCNLSLPSAAVLCFKELYLLLYRSKILLDYCLQSSKLWLLLQN
QSISGHFHDLNQEISTLLDVFPMEELELTEDIREQLELLQKQVRRAKLFLDKNDEGLRLR
LYSFLDDFGSGRIPDPVELRLFFVDRLGIRDAKSCRAEIEFLEEQIYSHEGDVEPNESEV
EMSFGIKKPRKGLITQEIGDTFITVPKDFCCPISLDVMRDPVIISTGQTYDRTSISRWME
EGHCSCPKTGQMLAHPRLVPNRALRNLITQWCTAYGITLDPPDSPDSVVETFAAALPTKA
AIEANKATAALLVQQLASGSQGAKTVAAREIRLLAKTGKENRAYIAEAGAIPHLLKLLSS
PNSVAQENSVTAMLNLSIYDKNKSRIMDEDGCLGLIVEVLIFGHTTEARENAAATLFSLS
AVHDYKKRIADEGGAVEALAGLLREGTPRGRKDAVTALFNLSTHTDNCARMVASGAVTAL
VAALGTEGVAEEAAGALALIVRRPIGAEAVGREEMAVAGLLGMMRCGTPRGKENAVAALL
ELCRSGGTAATERVLKAPALAGLLQTLLFTGTKRARRKAASLARVFQRCENAALHFGGLG
VGYAFARNSSANTDASFSSEVSMQMPISVPFHFLLYFVMPNYLTNQNEEFSKNGQVGNSI
MWKSCF

Transcript Sequence

Transcript ID

VIT_10s0003g01730.t01
Transcript Infomation

cdna chromosome:12X:10:3197007:3199895:1 gene:VIT_10s0003g01730 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HMC1]
Sequence

TGAGAAACGAGATTCAGACAAGTAGTAGAATCACACACAAAAATAAACAATAAGTGTAAG
AGAGTTGCACTGTTTTCCTTGTTTTTGTTTTTATTGTTTTGTTTTTTGTTTCTGGGTTTG
TTTATTAGAGAGAGAGAGAGATTTTGGTGCTGCAGAGGTCTTGATTTTCCAAGAGATTTG
TGCATCTTCAAAATTTGTTTGCAGGTAAATTGAGGGGAAATATTTCGCAGTGTTTTTTTT
AGTAACCCTAGATAACGTTCGAATTCCATGGCCTCCGCTGCGATAGTATCGTCTCTGCGG
CGGCGGAGATCGCCGTCTTTGGAGGCTTTCTTGGCGCCGGTGGATCTAAACGAGGTGGCT
CTTGTACGGACACTGGCCACCATCTCCATGGAGCTTATATTTGCGTTTTCCGATAGGCCT
TGGCCGTTTCAGCGCAAGAATTCGAGGTCCTTGATTCGGAAAATTGAGGTCTTTCTGGTG
CTGTTAGAGTTCCTGAGGGATTGCAATTTGAGTCTGCCTTCGGCGGCGGTGCTTTGCTTC
AAGGAGCTTTACCTGCTTCTGTATCGGTCGAAGATACTTCTCGATTATTGCTTGCAATCA
AGTAAATTGTGGCTTCTGTTGCAGAACCAGTCGATTTCGGGGCATTTTCATGATCTTAAT
CAGGAAATTTCGACGCTGTTGGATGTATTTCCGATGGAGGAACTTGAATTGACTGAAGAT
ATAAGGGAGCAGCTTGAGCTTTTGCAGAAACAGGTGAGGAGGGCGAAGTTGTTTCTTGAT
AAGAATGATGAGGGGTTGAGGCTGAGGTTGTATTCTTTTCTTGATGACTTTGGGAGTGGG
CGGATTCCTGATCCAGTGGAGCTGCGGTTGTTTTTTGTGGATAGATTAGGGATTCGGGAT
GCGAAGAGTTGTAGGGCTGAAATTGAGTTTTTGGAGGAGCAGATTTATAGTCACGAGGGA
GATGTTGAGCCGAATGAGAGCGAGGTAGAAATGAGTTTTGGGATTAAGAAGCCGAGGAAA
GGGTTGATTACTCAAGAAATTGGGGATACCTTCATAACAGTCCCCAAGGACTTTTGTTGC
CCCATATCTTTGGATGTGATGCGAGACCCAGTAATAATTTCAACAGGACAGACATATGAT
CGAACTTCAATATCAAGGTGGATGGAAGAAGGGCATTGTAGTTGCCCAAAGACAGGGCAG
ATGCTTGCTCACCCTCGCCTTGTTCCCAATCGAGCTCTCAGGAATTTGATCACACAATGG
TGCACTGCTTATGGAATCACCTTGGATCCACCAGACAGCCCAGATAGTGTTGTAGAAACT
TTTGCAGCAGCTTTGCCAACCAAAGCTGCTATTGAAGCCAACAAAGCCACAGCAGCGCTT
CTCGTCCAACAGCTTGCAAGTGGTTCACAGGGTGCAAAGACTGTAGCTGCCCGTGAGATA
CGTTTATTAGCAAAAACAGGGAAGGAAAACCGTGCGTATATAGCAGAAGCTGGGGCAATC
CCCCATCTTCTCAAGCTACTCTCATCTCCAAATTCTGTCGCACAAGAGAATTCTGTAACG
GCAATGCTTAACCTATCAATATATGACAAGAACAAAAGCCGAATTATGGATGAGGATGGG
TGTTTAGGTTTGATTGTTGAAGTTCTGATATTTGGGCACACAACGGAAGCAAGGGAAAAT
GCAGCTGCGACATTGTTCAGCCTTTCTGCTGTTCATGATTATAAGAAGAGAATAGCGGAC
GAGGGTGGGGCAGTTGAAGCCCTGGCAGGGCTGTTGAGAGAGGGAACCCCAAGAGGAAGG
AAAGATGCTGTAACGGCTCTATTTAATCTATCAACCCACACAGATAATTGTGCCAGAATG
GTAGCGTCAGGGGCTGTAACTGCATTAGTAGCGGCCTTGGGAACTGAGGGGGTTGCAGAG
GAAGCAGCGGGAGCATTGGCCTTGATTGTTAGGCGGCCAATTGGGGCTGAAGCAGTAGGG
AGGGAGGAAATGGCAGTGGCTGGGTTATTAGGAATGATGCGGTGTGGGACTCCAAGGGGG
AAAGAGAATGCAGTTGCAGCATTGCTTGAACTGTGCAGAAGTGGCGGGACAGCTGCAACA
GAAAGGGTCCTTAAGGCTCCAGCGCTGGCTGGTTTGCTTCAGACTCTGTTGTTTACAGGT
ACAAAGCGCGCTAGGAGAAAGGCTGCATCCCTTGCCAGAGTTTTCCAGAGGTGTGAGAAT
GCAGCCTTGCATTTTGGTGGACTTGGTGTAGGGTATGCATTTGCCAGAAACTCATCTGCA
AATACCGATGCAAGCTTTTCTAGTGAGGTTTCCATGCAAATGCCCATTTCAGTGCCTTTT
CATTTTCTGCTATATTTTGTAATGCCCAATTACTTGACAAATCAGAATGAGGAATTCTCT
AAAAATGGTCAAGTTGGTAATAGTATAATGTGGAAAAGCTGCTTTTAGGTGTTGTTTTAA
TTAAGGAATATGCAGAGTTTGAATAGGTCTATTAGGTCTATTAGTATTGTAATACAAATC
TTGTAACTTGTCCTACTCTATCAATTGATGTTTCAAAGTGCAATATGATAATGTTGAAGG
TGCCGTGAACACCTTGAACATCATCATATTACACCTCGGATGCCATCATACTGGTTAGTA
GGTG