Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g01420.t01
CDS Infomation

cds chromosome:12X:10:2803530:2807093:-1 gene:VIT_10s0003g01420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HMA5]
Sequence

ATGGCAGACAGGCAGAGCAAGGAGAACACAAGCAAAAGGAAGAACGGGGAGAACCAATCT
TTGCTTCTGGGGCGGTACGAGATCGGGAAGCTTCTGGGGCATGGGACATTCGCCAAGGTC
TACCACGCCAGGAACGTCGGATCCAACGAGAGCGTGGCCATCAAAGTCATCGACAAGGAG
AAGATCCTCAAAGGCGGTTTGATCGCACATATCAAGCGCGAGATCTCCATACTCCGCCGC
GTTCGCCATCCCAACATCGTTCAATTGTTTGAAGTCATGGCCACCAAGGCTAAGATCTAC
TTCGTCATGGAGTACGTCAGGGGCGGAGAGCTCTTCAATAAGGTCGCCAAAGGCCGCCTC
AAGGAGGAGGTCGCTCGCAAGTATTTCCAGCAGTTGATCTCCGCCGTCGGCTTCTGCCAC
GCCAGAGGGGTCTACCACCGCGACCTCAAGCCCGAGAATCTCTTACTGGACGAAGCCGGT
GACCTCAAAGTCTCCGATTTTGGGCTTAGCGCTGTCTCTGATCAGATGAGGCAGGATGGC
CTGTTCCACACCTTTTGTGGGACTCCGGCGTATGTGGCACCTGAGGTTTTGGCCCGGAAG
GGCTATGACGCATCCAAGGTTGATATATGGTCGTGCGGTGTGATACTCTTCGTCTTGATG
GCTGGGTATCTCCCTTTCCATGATCAGAACATCATGGCCATGTACAAGAAAATCTACAAG
GGTGAATTCCGATGCCCTCGGTGGTTTTCGCCGGAGCTCGCTCGGCTTCTTACTCGGCTC
CTCGATACGAACCCGGAAACCAGAATTACAATTCCGGAGATTATGGAGAATCGGTGGTTT
AAGAAAGGTTTTAAACATATTAAATTTTACATTGAGGATGATACGCTTAGACTCTGTAAT
GCTGAGGAGGCTGAGGATGATGTGGAGTCTTTGTCGGATCAATCTATGTCAGAGTCGGAG
TCGGAGTTGGAGACTCGGAGGAGGCTTTCTACATTGCCAAGACCGGCGAGTTTGAATGCA
TTTGATATTATATCATTTTCACCAGGTTTCGATCTCTCTGGATTGTTTGAGGAGGGAGGT
GGAGACGCGCGATTTGTGTCGGGTGCACCTGTATCGAAGATTATATCAAAATTAGAGGAG
ATTGCCAAGGTGGTGAGCTTTACAGTGAGGAAGAAGGATTGTAGGGTGAGCTTAGAGGGA
TCCAGAGAGGGGGTGAAGGGGCCATTAACGATTGCAGCTGAGATTTTTGAGTTAACGCCC
TCATTGGTGGTGGTGGAAGTTAAGAAGAAAGGAGGCGACAAAGGGGAGTATGAGGAGTTC
TGTAATCGTGAATTAAAACCCGTGTTGCAGAACCTTAACCTTGTGGTGGATGACTCTGCT
TCTACACCACATTTGCCCTCAGATACTGAATAG

Peptide Sequence

PEP ID

VIT_10s0003g01420.t01
PEP Infomation

pep chromosome:12X:10:2803530:2807093:-1 gene:VIT_10s0003g01420 transcript:VIT_10s0003g01420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HMA5]
Sequence

MADRQSKENTSKRKNGENQSLLLGRYEIGKLLGHGTFAKVYHARNVGSNESVAIKVIDKE
KILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRL
KEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDEAGDLKVSDFGLSAVSDQMRQDG
LFHTFCGTPAYVAPEVLARKGYDASKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYK
GEFRCPRWFSPELARLLTRLLDTNPETRITIPEIMENRWFKKGFKHIKFYIEDDTLRLCN
AEEAEDDVESLSDQSMSESESELETRRRLSTLPRPASLNAFDIISFSPGFDLSGLFEEGG
GDARFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTP
SLVVVEVKKKGGDKGEYEEFCNRELKPVLQNLNLVVDDSASTPHLPSDTE

Transcript Sequence

Transcript ID

VIT_10s0003g01420.t01
Transcript Infomation

cdna chromosome:12X:10:2803530:2807093:-1 gene:VIT_10s0003g01420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HMA5]
Sequence

AAACCAGTTGTAATTTCTAAAACAAGAGATTCAAATGCGGAATCGCTGAAGGAGAAGAAA
CAGAAGGTTCGAGACATCATCCATGGCAGACAGGCAGAGCAAGGAGAACACAAGCAAAAG
GAAGAACGGGGAGAACCAATCTTTGCTTCTGGGGCGGTACGAGATCGGGAAGCTTCTGGG
GCATGGGACATTCGCCAAGGTCTACCACGCCAGGAACGTCGGATCCAACGAGAGCGTGGC
CATCAAAGTCATCGACAAGGAGAAGATCCTCAAAGGCGGTTTGATCGCACATATCAAGCG
CGAGATCTCCATACTCCGCCGCGTTCGCCATCCCAACATCGTTCAATTGTTTGAAGTCAT
GGCCACCAAGGCTAAGATCTACTTCGTCATGGAGTACGTCAGGGGCGGAGAGCTCTTCAA
TAAGGTCGCCAAAGGCCGCCTCAAGGAGGAGGTCGCTCGCAAGTATTTCCAGCAGTTGAT
CTCCGCCGTCGGCTTCTGCCACGCCAGAGGGGTCTACCACCGCGACCTCAAGCCCGAGAA
TCTCTTACTGGACGAAGCCGGTGACCTCAAAGTCTCCGATTTTGGGCTTAGCGCTGTCTC
TGATCAGATGAGGCAGGATGGCCTGTTCCACACCTTTTGTGGGACTCCGGCGTATGTGGC
ACCTGAGGTTTTGGCCCGGAAGGGCTATGACGCATCCAAGGTTGATATATGGTCGTGCGG
TGTGATACTCTTCGTCTTGATGGCTGGGTATCTCCCTTTCCATGATCAGAACATCATGGC
CATGTACAAGAAAATCTACAAGGGTGAATTCCGATGCCCTCGGTGGTTTTCGCCGGAGCT
CGCTCGGCTTCTTACTCGGCTCCTCGATACGAACCCGGAAACCAGAATTACAATTCCGGA
GATTATGGAGAATCGGTGGTTTAAGAAAGGTTTTAAACATATTAAATTTTACATTGAGGA
TGATACGCTTAGACTCTGTAATGCTGAGGAGGCTGAGGATGATGTGGAGTCTTTGTCGGA
TCAATCTATGTCAGAGTCGGAGTCGGAGTTGGAGACTCGGAGGAGGCTTTCTACATTGCC
AAGACCGGCGAGTTTGAATGCATTTGATATTATATCATTTTCACCAGGTTTCGATCTCTC
TGGATTGTTTGAGGAGGGAGGTGGAGACGCGCGATTTGTGTCGGGTGCACCTGTATCGAA
GATTATATCAAAATTAGAGGAGATTGCCAAGGTGGTGAGCTTTACAGTGAGGAAGAAGGA
TTGTAGGGTGAGCTTAGAGGGATCCAGAGAGGGGGTGAAGGGGCCATTAACGATTGCAGC
TGAGATTTTTGAGTTAACGCCCTCATTGGTGGTGGTGGAAGTTAAGAAGAAAGGAGGCGA
CAAAGGGGAGTATGAGGAGTTCTGTAATCGTGAATTAAAACCCGTGTTGCAGAACCTTAA
CCTTGTGGTGGATGACTCTGCTTCTACACCACATTTGCCCTCAGATACTGAATAGAAAGG
AGAGAGAGAGAAGGGTATGCTTTTTCCTCTCTTTTTTTCTTTGCTAAGGCTTATGTATGA
TAATGTGTCTTCCTTTTCCTTTTTTTTTTCTTTCCTTTTTTCTCCCTTGTCCATCTGTTA
CGTTTTGCTACTTAGATGAAGCTTTAGACGTTGTATTGTGTAACACAACATGGCCTGTGA
ATTCACGAGGCACGATTATAGTTTTGCCTGAGATCGAAACTTCTCTTTGGCATTACTGAA
AGAAGCCCTCTCTTGTGACAAGGAAAACATTAGTAATTGTTTTCTTGCTTATTCTGAATG
ATTCCCAATTTGGGGAAATTTTTTTTGTGCATGTTAATCTTCTTTTGTTTTATACATCAA
TTATATACATGAAATCCTACTTTGAAGGTAGGGTCCTACTACAGTACC