Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g00880.t01
CDS Infomation

cds chromosome:12X:10:2121041:2127962:1 gene:VIT_10s0003g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCTCGATTCTGAGAAGAGTACCATTAACCCTGTCGTCACCTGTCTACAAGATCATG
GAATCTTCAAACATGGTGGGCGGATCACAACGGCTGCTCAACTTGGCTCGCCAGCTCCGC
CTCTACAAGCCTTCGCCGCCGCCCTCCGACGATTATGACGACCTCGAGGAGCGGGGCAGT
GAAGAGGCCGCCGGCAAGGTGGTTTCTCAAGTGGGTTTCGCTGAATCCGCCACCTCAGTT
GAGTACGAAGGGAGGTTCAGGCCCAAGAGAGCTGCAGTTCTGATCTGTCTCTTTGAAGGG
GATGCTGGGGATTTGCGTGTGATTCTCACGAAGCGGTCTTCTAAACTGTCCACACACTCG
GGGGAAGTTTCGTTGCCTGGTGGGAAACAGGAGGAGGGTGATAAAGATGATGCTGATACA
GCGACCAGGGAAGCCAACGAAGAGATTGGGTTGGACCCTTCCCTTGTAAATGTTGTAACT
GTTCTTGAGCCATTCTTGTCTAAGCACCTCCTAAGGGTTGTTCCTGTTATTGGCATACTT
TCTGATAAGAAAGCATTTGAACCTGCCCCCAATGCTGATGAAGTGGATGCGGTATTTGAT
GCCCCTTTGGAGATGTTCATCAAGGATGAAAATAGGAGATCAGAGGAAAGAGAGTGGATG
GGACAGAAGTATTTGATTCATTTCTTCGACTACGAAATGGAGAATAAGAAGTATTTAATA
TGGGGTCTAACCGCAGGGATCTTGATTAGAGCCGCCTCAGTTGTGTTCCAGCAGCCACCA
GCCTTTCTGGAGCAGAAGCCTAATTTTAAGGTTCCTAGGGGCGCAGACCGGGCTCCCGCA
CAATCGAAAGACGGAACCGGGACTACTTGGAATCAAGTGATGGATTCTGAGGACCTGACG
CTCAAAATCTTGGCAGAAGAGCTCCGTCTCTACAAACCTCCTCATTCCATTCCCATTCAA
CAATCCGGTTCAGATTCTGAATCTGCCAGGCGCAAACCCAATAGAGCCGCTGTTCTCATC
TGCCTTTTCCAGGGCGAGAATGGCGATCTCCATGTGATTCTCACCAAGCGCTCTTCAACC
CTCTCTTCTCACTCTGGTGAGGTTTCGTTACCCGGTGGGAAAAGAGAGGAAGGTGATGCT
GACGACATTGAGACTGCCATGAGGGAGGCTAAAGAGGAGATAGGTTTGGATCCTTCACTT
GTGAATGCTGTTACTGTTCTCGAGCCTTTCGTAAACAAGCGTGGTATGATAGTAGTTCCT
GTGGTTGGCATACTTTCTGATAAGAAAGCATTCGTTCCAGCTCCAAATGCTTCTGAAGTT
GAAGCAGTATTTGATACTCCCTTAGAAATGTTCCTCAAGGATGAGAACCGGAGAGCAGAG
GAGAGAGAATGGATGGGAGACAAGTATTTACTCCATTACTTCGATTATGAAGCAGAGAAT
GAGAGGTATGTGATCTGGGCTTTGACTGCTGGAATCTTGATTAGGACCGCATCAATTGTT
TACCAGCGCCCACCAGCCTTTCTGGAGCGGAAGCCCAAATTCTGGAGCAGGATTGTTAAC
TAG

Peptide Sequence

PEP ID

VIT_10s0003g00880.t01
PEP Infomation

pep chromosome:12X:10:2121041:2127962:1 gene:VIT_10s0003g00880 transcript:VIT_10s0003g00880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MISILRRVPLTLSSPVYKIMESSNMVGGSQRLLNLARQLRLYKPSPPPSDDYDDLEERGS
EEAAGKVVSQVGFAESATSVEYEGRFRPKRAAVLICLFEGDAGDLRVILTKRSSKLSTHS
GEVSLPGGKQEEGDKDDADTATREANEEIGLDPSLVNVVTVLEPFLSKHLLRVVPVIGIL
SDKKAFEPAPNADEVDAVFDAPLEMFIKDENRRSEEREWMGQKYLIHFFDYEMENKKYLI
WGLTAGILIRAASVVFQQPPAFLEQKPNFKVPRGADRAPAQSKDGTGTTWNQVMDSEDLT
LKILAEELRLYKPPHSIPIQQSGSDSESARRKPNRAAVLICLFQGENGDLHVILTKRSST
LSSHSGEVSLPGGKREEGDADDIETAMREAKEEIGLDPSLVNAVTVLEPFVNKRGMIVVP
VVGILSDKKAFVPAPNASEVEAVFDTPLEMFLKDENRRAEEREWMGDKYLLHYFDYEAEN
ERYVIWALTAGILIRTASIVYQRPPAFLERKPKFWSRIVN

Transcript Sequence

Transcript ID

VIT_10s0003g00880.t01
Transcript Infomation

cdna chromosome:12X:10:2121041:2127962:1 gene:VIT_10s0003g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATGATGAGGTATTGAAAAGAAGAATAAAGCCCAAAAAGGTTGGATCAAATGATCTCGA
TTCTGAGAAGAGTACCATTAACCCTGTCGTCACCTGTCTACAAGATCATGGAATCTTCAA
ACATGGTGGGCGGATCACAACGGCTGCTCAACTTGGCTCGCCAGCTCCGCCTCTACAAGC
CTTCGCCGCCGCCCTCCGACGATTATGACGACCTCGAGGAGCGGGGCAGTGAAGAGGCCG
CCGGCAAGGTGGTTTCTCAAGTGGGTTTCGCTGAATCCGCCACCTCAGTTGAGTACGAAG
GGAGGTTCAGGCCCAAGAGAGCTGCAGTTCTGATCTGTCTCTTTGAAGGGGATGCTGGGG
ATTTGCGTGTGATTCTCACGAAGCGGTCTTCTAAACTGTCCACACACTCGGGGGAAGTTT
CGTTGCCTGGTGGGAAACAGGAGGAGGGTGATAAAGATGATGCTGATACAGCGACCAGGG
AAGCCAACGAAGAGATTGGGTTGGACCCTTCCCTTGTAAATGTTGTAACTGTTCTTGAGC
CATTCTTGTCTAAGCACCTCCTAAGGGTTGTTCCTGTTATTGGCATACTTTCTGATAAGA
AAGCATTTGAACCTGCCCCCAATGCTGATGAAGTGGATGCGGTATTTGATGCCCCTTTGG
AGATGTTCATCAAGGATGAAAATAGGAGATCAGAGGAAAGAGAGTGGATGGGACAGAAGT
ATTTGATTCATTTCTTCGACTACGAAATGGAGAATAAGAAGTATTTAATATGGGGTCTAA
CCGCAGGGATCTTGATTAGAGCCGCCTCAGTTGTGTTCCAGCAGCCACCAGCCTTTCTGG
AGCAGAAGCCTAATTTTAAGGTTCCTAGGGGCGCAGACCGGGCTCCCGCACAATCGAAAG
ACGGAACCGGGACTACTTGGAATCAAGTGATGGATTCTGAGGACCTGACGCTCAAAATCT
TGGCAGAAGAGCTCCGTCTCTACAAACCTCCTCATTCCATTCCCATTCAACAATCCGGTT
CAGATTCTGAATCTGCCAGGCGCAAACCCAATAGAGCCGCTGTTCTCATCTGCCTTTTCC
AGGGCGAGAATGGCGATCTCCATGTGATTCTCACCAAGCGCTCTTCAACCCTCTCTTCTC
ACTCTGGTGAGGTTTCGTTACCCGGTGGGAAAAGAGAGGAAGGTGATGCTGACGACATTG
AGACTGCCATGAGGGAGGCTAAAGAGGAGATAGGTTTGGATCCTTCACTTGTGAATGCTG
TTACTGTTCTCGAGCCTTTCGTAAACAAGCGTGGTATGATAGTAGTTCCTGTGGTTGGCA
TACTTTCTGATAAGAAAGCATTCGTTCCAGCTCCAAATGCTTCTGAAGTTGAAGCAGTAT
TTGATACTCCCTTAGAAATGTTCCTCAAGGATGAGAACCGGAGAGCAGAGGAGAGAGAAT
GGATGGGAGACAAGTATTTACTCCATTACTTCGATTATGAAGCAGAGAATGAGAGGTATG
TGATCTGGGCTTTGACTGCTGGAATCTTGATTAGGACCGCATCAATTGTTTACCAGCGCC
CACCAGCCTTTCTGGAGCGGAAGCCCAAATTCTGGAGCAGGATTGTTAACTAGGATATGG
CACCATAAATCCAGAGAATTCCTTGAGGGAACTCTCTCGTGAGGTTGTTCTTCTCTTTAT
AGTCATTATTAGAATCCATGAAACTCACCATTCGGACTATCAACTTCAATATCATTGAAA
TGTAATTCAGATTCTGAATTCGCATATAA