Plant GARDEN How To ▶︎

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Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g00420.t01

CDS Infomation

cds chromosome:12X:10:1695104:1704519:-1 gene:VIT_10s0003g00420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F6HM45]

Sequence

ATGGTGGCTATGATCGATCTCAACACCGTCGACGACGACGAGACACCCTCGTCTGGGTCG
TCGTCTTCCTCCTCCTCATCCGCCTCTGCTTCTGCTTCCACAGTTTGTGGTTCTTTGTTG
TCGGCGGCGTCGTCGGTATGTTTGGAGCTGTGGCACGCGTGTGCTGGCCCGCTCATATCG
CTTCCGAAGAAAGGCAGCCTTGTGGTGTACTTTCCACAGGGCCACCTGGAGCAGCTTTCT
GATTATCCGGCCGTAGCCTATGATCTCCCGCCTCACGTCTTCTGTCGAGTGGTTGATGTC
AAGCTCCATGCCGAGGTAGTTACGGATGAAGTTTACGCACAGGTCTCGCTGGTTCCTGAA
ACCAAGATTAAGCAGAAACTGCAGGAAGGGGAAATTGAAGCAGATGGTGGTGAAGAAGAG
GATATTGAGGGTTCTATCAAGTCCATGACACCCCACATGTTCTGCAAAACTCTTACTGCT
TCAGATACTAGCACCCATGGGGGTTTTTCTGTCCCCCGCCGAGCTGCAGAGGACTGTTTT
CCTCCCCTGGATTACAAACAGCAGAGACCTTCACAAGAGCTTGTGGCCAAAGATTTGCAT
GGCTTCGAATGGAGATTCCGGCATATCTACAGGGGGCAGCCAAGGCGGCATTTGCTTACT
ACTGGTTGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTACTCTTT
CTTAGGGGTGGGGATGGAGAACTAAGACTGGGAATCCGAAGAGCAGCTCAAATTAAAGGT
TCGTCTCCTTTCCCAGCTCTTTGTAGCCAACAGTTGAATCTCAACACCCTTACAGCTGTG
GTCAATGCTATATCCACAAGAAGTGTTTTCAACATATGCTACAATCCGAGGGCTAGCTCA
TCAGAGTTCATAATACCGCTCCGTAAATTCTCAAAGAGCATTGATCATTCATTTTCTGCT
GGGATGAGGTTCAAAATGCGTGTTGAAACAGAAGATGCAGCAGAACGAAGATATACTGGA
CTGATAACTGGGATCAGTGACATGGATCCTGTTAGATGGCCTGGTTCTAAATGGAGGTGC
CTATTGGTAAGGTGGGACGATATAGAGGCTAATCGACATAACAGGGTTTCTCCATGGGAA
ATTGAGCTATCTGGTTCGCTTTCTGGTTCTGGCAGCTTGACAGTTCCTGGCTCAAAGAGG
ACCAGGATTGGTTTGCCGGGAACTAGACCAGATTTTTCAGTTCCCAATGGGATGGGAGTG
TCAGACTTTGGGGAATCTTCAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTTGGT
TTTAACACTCCTTATGATGGTGTTGATACCCAGGATCATCATCCATCTGAAATAAGGTGT
TTTCCTGGTTCAAGTTGTTCTGGGATTGCTGCAATAGGAAATGGTGTTAGAAACCCTCTT
GGGAATTCTGATATTTCCTATAAAGGCATAGGCTTTGGTGAATCTTTTCGATTCCATAAG
GTCTTGCAAGGTCAAGAAACATTTCCAAGCCCACCATGTGGAAGAGCTCTGTCTGCTAAC
CAGGCTCATGAAAATGGTAGCTTTGGAATCTTTGATGGTGTTCAAGTGCCGACTTCTAGA
AATGGATGGCCTGCCCTTGTGCAGGGATATAATGCCCACACTCACCTGTCCACACCATCA
GTGCAAGTGTCGTCACCATCATCGGTGTTAATGTTCCAGCAAGCAAGCACTGCTGCTCCT
AACATTTACTCAATGCATAGCGCCAATAATCAGGAGAAGGAGCAAGAAATTAGTAACCGG
AGTTCATTTGATATTCCTGAAGTGTATGGTGAAAAGCTCACACCATCACGTTGTGAGCTT
AGTGTCAGGGGAGGAGGTCAGGGAGGTATGAATTTCTTTGGTCTGTTAAACGAGCATAAT
CAACTAGCTGTTCCACATCCTCTTGTAACTCAATCAGCATTTAGAGGCAGTCAAGATTTA
GTTCCTACATGTAAAAGTAGCTGCAGGCTCTTTGGCTTTTCCTTAACGGAGGAAAGAAGC
ATTGGAAATAAAGTGGACAACCCCACTCCTGTTACATCTTCATTGATTCCTGGAACCTCT
TTTCTGCCCCAGCAGTTGCACTCAGAGCCTCCGGTGATGACCAAGGCAATTGGAAGCAAT
TGTACCAAAGTAAGTGACTTCTATGCTGATCATGAGGATGTTGTGATGCTTGTTCGAGAT
GACTCATGGCATGATATGCATCTGAGCCTCAGACCAGCCTTTTATAGTCCAAAATCAGGT
TTAGCAGAAATTCAAAATGGAAATCTGCAGCATTTGATGAAAAATTATGATATTTACTAA

Peptide Sequence

PEP ID

VIT_10s0003g00420.t01

PEP Infomation

pep chromosome:12X:10:1695104:1704519:-1 gene:VIT_10s0003g00420 transcript:VIT_10s0003g00420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F6HM45]

Sequence

MVAMIDLNTVDDDETPSSGSSSSSSSSASASASTVCGSLLSAASSVCLELWHACAGPLIS
LPKKGSLVVYFPQGHLEQLSDYPAVAYDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPE
TKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCF
PPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLF
LRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAISTRSVFNICYNPRASS
SEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGSKWRC
LLVRWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSVPNGMGV
SDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEIRCFPGSSCSGIAAIGNGVRNPL
GNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPTSR
NGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYSMHSANNQEKEQEISNR
SSFDIPEVYGEKLTPSRCELSVRGGGQGGMNFFGLLNEHNQLAVPHPLVTQSAFRGSQDL
VPTCKSSCRLFGFSLTEERSIGNKVDNPTPVTSSLIPGTSFLPQQLHSEPPVMTKAIGSN
CTKVSDFYADHEDVVMLVRDDSWHDMHLSLRPAFYSPKSGLAEIQNGNLQHLMKNYDIY

Transcript Sequence

Transcript ID

VIT_10s0003g00420.t01

Transcript Infomation

cdna chromosome:12X:10:1695104:1704519:-1 gene:VIT_10s0003g00420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F6HM45]

Sequence

CTCTGATACTATGGTGGCTATGATCGATCTCAACACCGTCGACGACGACGAGACACCCTC
GTCTGGGTCGTCGTCTTCCTCCTCCTCATCCGCCTCTGCTTCTGCTTCCACAGTTTGTGG
TTCTTTGTTGTCGGCGGCGTCGTCGGTATGTTTGGAGCTGTGGCACGCGTGTGCTGGCCC
GCTCATATCGCTTCCGAAGAAAGGCAGCCTTGTGGTGTACTTTCCACAGGGCCACCTGGA
GCAGCTTTCTGATTATCCGGCCGTAGCCTATGATCTCCCGCCTCACGTCTTCTGTCGAGT
GGTTGATGTCAAGCTCCATGCCGAGGTAGTTACGGATGAAGTTTACGCACAGGTCTCGCT
GGTTCCTGAAACCAAGATTAAGCAGAAACTGCAGGAAGGGGAAATTGAAGCAGATGGTGG
TGAAGAAGAGGATATTGAGGGTTCTATCAAGTCCATGACACCCCACATGTTCTGCAAAAC
TCTTACTGCTTCAGATACTAGCACCCATGGGGGTTTTTCTGTCCCCCGCCGAGCTGCAGA
GGACTGTTTTCCTCCCCTGGATTACAAACAGCAGAGACCTTCACAAGAGCTTGTGGCCAA
AGATTTGCATGGCTTCGAATGGAGATTCCGGCATATCTACAGGGGGCAGCCAAGGCGGCA
TTTGCTTACTACTGGTTGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGC
TGTACTCTTTCTTAGGGGTGGGGATGGAGAACTAAGACTGGGAATCCGAAGAGCAGCTCA
AATTAAAGGTTCGTCTCCTTTCCCAGCTCTTTGTAGCCAACAGTTGAATCTCAACACCCT
TACAGCTGTGGTCAATGCTATATCCACAAGAAGTGTTTTCAACATATGCTACAATCCGAG
GGCTAGCTCATCAGAGTTCATAATACCGCTCCGTAAATTCTCAAAGAGCATTGATCATTC
ATTTTCTGCTGGGATGAGGTTCAAAATGCGTGTTGAAACAGAAGATGCAGCAGAACGAAG
ATATACTGGACTGATAACTGGGATCAGTGACATGGATCCTGTTAGATGGCCTGGTTCTAA
ATGGAGGTGCCTATTGGTAAGGTGGGACGATATAGAGGCTAATCGACATAACAGGGTTTC
TCCATGGGAAATTGAGCTATCTGGTTCGCTTTCTGGTTCTGGCAGCTTGACAGTTCCTGG
CTCAAAGAGGACCAGGATTGGTTTGCCGGGAACTAGACCAGATTTTTCAGTTCCCAATGG
GATGGGAGTGTCAGACTTTGGGGAATCTTCAAGGTTCCAGAAGGTCTTGCAAGGTCAAGA
AATTTTTGGTTTTAACACTCCTTATGATGGTGTTGATACCCAGGATCATCATCCATCTGA
AATAAGGTGTTTTCCTGGTTCAAGTTGTTCTGGGATTGCTGCAATAGGAAATGGTGTTAG
AAACCCTCTTGGGAATTCTGATATTTCCTATAAAGGCATAGGCTTTGGTGAATCTTTTCG
ATTCCATAAGGTCTTGCAAGGTCAAGAAACATTTCCAAGCCCACCATGTGGAAGAGCTCT
GTCTGCTAACCAGGCTCATGAAAATGGTAGCTTTGGAATCTTTGATGGTGTTCAAGTGCC
GACTTCTAGAAATGGATGGCCTGCCCTTGTGCAGGGATATAATGCCCACACTCACCTGTC
CACACCATCAGTGCAAGTGTCGTCACCATCATCGGTGTTAATGTTCCAGCAAGCAAGCAC
TGCTGCTCCTAACATTTACTCAATGCATAGCGCCAATAATCAGGAGAAGGAGCAAGAAAT
TAGTAACCGGAGTTCATTTGATATTCCTGAAGTGTATGGTGAAAAGCTCACACCATCACG
TTGTGAGCTTAGTGTCAGGGGAGGAGGTCAGGGAGGTATGAATTTCTTTGGTCTGTTAAA
CGAGCATAATCAACTAGCTGTTCCACATCCTCTTGTAACTCAATCAGCATTTAGAGGCAG
TCAAGATTTAGTTCCTACATGTAAAAGTAGCTGCAGGCTCTTTGGCTTTTCCTTAACGGA
GGAAAGAAGCATTGGAAATAAAGTGGACAACCCCACTCCTGTTACATCTTCATTGATTCC
TGGAACCTCTTTTCTGCCCCAGCAGTTGCACTCAGAGCCTCCGGTGATGACCAAGGCAAT
TGGAAGCAATTGTACCAAAGTAAGTGACTTCTATGCTGATCATGAGGATGTTGTGATGCT
TGTTCGAGATGACTCATGGCATGATATGCATCTGAGCCTCAGACCAGCCTTTTATAGTCC
AAAATCAGGTTTAGCAGAAATTCAAAATGGAAATCTGCAGCATTTGATGAAAAATTATGA
TATTTACTAATGAAGACGTAGTGATGGCACCAAACATAGATGCTTATAGTTGCTGAGAGG
CACACATGGCATCATTGATATGTTTTTAGCTCTTGGGCGAAAGAACTGTAATTATTGCCA
TAACAGTAATGTATCTTAACCTCCCTTGCTATGGAGAACAATTTAAACTAATTTACTAGG
TTCCTTGGAATACTCAGTTAAGAAATTACTTTTAAAACTGTATCAAAATA