Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_10s0003g00250.t01
CDS Infomation	cds chromosome:12X:10:1507976:1557050:-1 gene:VIT_10s0003g00250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-1,4 glucan phosphorylase [Source:UniProtKB/TrEMBL;Acc:F6HM34]
Sequence	ATGGCTACTATCTCCTCCCCTCTGCTTGTCTTTCATCACCGTCCATCCGACTTCTCTTCT CCACAATCACTCAATCTACACCGTCCATTCCCAGTTCAGTTGAAGCCACTTCCACGGCAT TCTTTCATCTGCAACTCCTGGGTCGGACCCAAACCAGCAGGGCCCTCTACCGCCGATGTA AACTCCGCCACGCCGACGGTAACAGTCGACGCCGCCGTATCGACAGACTCCACATCATTC GTGATCCGCGCTCGTAACAAGATCGGCCTGCTCCAAGTCATCACCAGGGTTTTCAAGGTC CTTGGCCTCCACATTGACAAGGCTACCGTGGAATTCGAAGGCGATTTCTTTACCCAGAAG TTCTTCGTCACTGATTCTCATGGGAGGAAGATTGAGGATCAGGAAAATTTGGACCGTATC ACGAAGGCGCTGTTGGAGGCGATCGACGGTGGCGGTGGATGGGGCACGGAGACGTCGGTG GGGCCGAGTACAAGAGGCATTGTGGTGAGAAGAGCTGGATTAGGGCCGAAGCCGCAGGCG GAGAGAATGTTTGCCTTGATGGATAGGTTTCTGTCGAATGATCCAGTCAGTCTTCAAAAG GATATTTTGGATCACGTTGAGTACACAGTGGCCAGGTCGCGATTTAGTTTTGATGATTTT GAGGCCTATCAGGCATTAGCACATAGTGTAAGAGATCGATTGATCGAGCGTTGGCATGAT ACTCAACAGTATTTCAAGAGGAAAGACCCAAAGCGTCTATACTTCCTGTCTCTCGAGTTT CTTATGGGCCGTTCCTTGTCAAATAGTGTTATAAACCTTGGAATCCGGGACCAGTGTGCA GATGCTTTAAGCCAGCTTGGGTTTGAATATGAAGTTTTGGCAGAGCAGGAAGGGGATGCT GCTCTTGGTAATGGTGGTCTAGCTCGCCTTTCAGCATGTCAAATGGATTCCTTAGCAACA CTAGACTATCCAGCATGGGGTTATGGACTACGCTACCAGTATGGGTTGTTCCGTCAGGTC ATACTGGATGGATTTCAACATGAACAGCCTGATTATTGGTTAAATTTTGGAAACCCATGG GAGATAGAGCGGGTTCATGTATCATATCCAGTGAAGTTCTATGGGACTGTTGAAGAGGAA ACTTTGAATGGAAAAAGTTGTAAAGTTTGGTTACCTGGAGAAACGGTCGAAGCTGTAGCT TATGATAATCCAATACCTGGTTACGGAACAAGGAATACAATTAATCTCCGCCTTTGGGCT GCTAAGCCAGATGGTCAATATGATATGGAATCATATAATACTGGAGATTATATCAATGCT GTTGTTAATAGACAAAGAGCTGAAACTATAAGCTGTGTTTTGTACCCTGATGACCGTTCT TATCAGGGAAAGGAACTGAGGTTGAAACAACACTATTTCTTTGTCTCAGCATCCTTACAA GACATCATTCGAAGGTTCAAAGATGGTCACAATAACTTTGATGATTTCCCAGAGAAGGTT GCACTGCAGTTGAATGATACTCACCCATCTCTTGCAGTAGTTGAGGTCATGAGAGTGCTT GTTGATGAAGAACATTTAGGTTGGGACCAGGCATGGAACATTGTATGCAGAATTTTCTCA TTTACAACTCACACAGTATTACCTGAAGCGCTAGAGAAAATCCCTGTTGATCTCCTAGGC AGTCTTCTCCCACGCCACTTACAAATTATATATGACATAAACTTTAATTTCATGGAGGAG TTGAAGAAGAGAATTGGTCTAGACTTCAACCGGTTGTCTCAGATGTCAATTGTGGAGGAA GGTGCTGTAAAGAGCATTCGAATGGCAAACCTGTCAATTGTTTGTTCTCATACTGTGAAT GGTGTTTCCAGGATGCATTCAGAGTTATTAAAAACACGAGTTTTCAAGGATTTTTATGAA CTGTGGCCACACAAATTCCAGTATAAGACAAATGGGGTAACTCAGCGTCGCTGGATTGTG GTGAGCAATCCTAGTTTATGTGCTCTTATCTCAAAATGGCTTGGAACAGAAGCTTGGATC CGTGACATTGACCTCTTAATCGGGTTGCAAGAATTTGCAGCAGATGCTGATCTACATCAA GAATGGAAGATGGTCAGAAAGGTTAATAAAATGAGGCTCGCAGAATACATTGAAGCAATG AGTGGTGTGAAGGTCAGTTTGGATGCAATGTTTGATGTGCAAATAAAGCGAATACACGAG TACAAAAGACAATTGCTTAATATACTCAGCATTATCCATCGATACGACTGCATAAAGAAT ATGGAGAAGACTCAGAGAAGGAAAGTTGTACCTCGTGTCTGCATAGTTGGAGGGAAAGCT GCTCCTGGTTATGAAGTTGCTAAGAAGATTATCAAACTTTGTCATGCTGTAGCAGAGAAA ATTAATAATGATGCTGACGTTGGAGATCTTCTCAAATTGATATTTGTCCCTGATTATAAT GTTTCTGTTGCTGAATTGGTAATACCAGGGGCTGACCTTTCACAGCACATAAGCACTGCT GGACATGAGGCATCAGGAACTGGCTGCATGAAGTTTTTGATGAATGGTTGTTTACTTTTA GCTACAGCAGATGGATCTACAGTTGAAATTATTGAAGAAATAGGAGAAGAAAACATGTTT TTATTTGGAGCAAAAGTGCATGAAGTTCCGGCATTGCGTGAGAAAAGTTCTGATCATAAA GCACCTCTTCAATTTTCACACGTAGTAAGGATGGTTCGAGATGGCCATTTTGGCTTTAAA GACTACTTCAAATCATTATGTGATGGTGTAGAGGGTGATAGTGACTTCTATCTTCTGGGT TCTGATTTTGCTAGCTATCTAGAGGCTCAGGCTGCTGCTGATAAAGCATTTGTTGATCAA GAAAAGTGGACTCAGATGAGCATACTTAGCACTGCTGGTTCTGGGAGATTCAGCAGCGAT AGAACAATTGAAGATTATGCAGAGACAACTTGGGGAATTGAACCATGCAAATGCCCCTCC TAA

Peptide Sequence

PEP ID	VIT_10s0003g00250.t01
PEP Infomation	pep chromosome:12X:10:1507976:1557050:-1 gene:VIT_10s0003g00250 transcript:VIT_10s0003g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-1,4 glucan phosphorylase [Source:UniProtKB/TrEMBL;Acc:F6HM34]
Sequence	MATISSPLLVFHHRPSDFSSPQSLNLHRPFPVQLKPLPRHSFICNSWVGPKPAGPSTADV NSATPTVTVDAAVSTDSTSFVIRARNKIGLLQVITRVFKVLGLHIDKATVEFEGDFFTQK FFVTDSHGRKIEDQENLDRITKALLEAIDGGGGWGTETSVGPSTRGIVVRRAGLGPKPQA ERMFALMDRFLSNDPVSLQKDILDHVEYTVARSRFSFDDFEAYQALAHSVRDRLIERWHD TQQYFKRKDPKRLYFLSLEFLMGRSLSNSVINLGIRDQCADALSQLGFEYEVLAEQEGDA ALGNGGLARLSACQMDSLATLDYPAWGYGLRYQYGLFRQVILDGFQHEQPDYWLNFGNPW EIERVHVSYPVKFYGTVEEETLNGKSCKVWLPGETVEAVAYDNPIPGYGTRNTINLRLWA AKPDGQYDMESYNTGDYINAVVNRQRAETISCVLYPDDRSYQGKELRLKQHYFFVSASLQ DIIRRFKDGHNNFDDFPEKVALQLNDTHPSLAVVEVMRVLVDEEHLGWDQAWNIVCRIFS FTTHTVLPEALEKIPVDLLGSLLPRHLQIIYDINFNFMEELKKRIGLDFNRLSQMSIVEE GAVKSIRMANLSIVCSHTVNGVSRMHSELLKTRVFKDFYELWPHKFQYKTNGVTQRRWIV VSNPSLCALISKWLGTEAWIRDIDLLIGLQEFAADADLHQEWKMVRKVNKMRLAEYIEAM SGVKVSLDAMFDVQIKRIHEYKRQLLNILSIIHRYDCIKNMEKTQRRKVVPRVCIVGGKA APGYEVAKKIIKLCHAVAEKINNDADVGDLLKLIFVPDYNVSVAELVIPGADLSQHISTA GHEASGTGCMKFLMNGCLLLATADGSTVEIIEEIGEENMFLFGAKVHEVPALREKSSDHK APLQFSHVVRMVRDGHFGFKDYFKSLCDGVEGDSDFYLLGSDFASYLEAQAAADKAFVDQ EKWTQMSILSTAGSGRFSSDRTIEDYAETTWGIEPCKCPS

Transcript Sequence

Transcript ID	VIT_10s0003g00250.t01
Transcript Infomation	cdna chromosome:12X:10:1507976:1557050:-1 gene:VIT_10s0003g00250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-1,4 glucan phosphorylase [Source:UniProtKB/TrEMBL;Acc:F6HM34]
Sequence	AACGGCAATGGCTACTATCTCCTCCCCTCTGCTTGTCTTTCATCACCGTCCATCCGACTT CTCTTCTCCACAATCACTCAATCTACACCGTCCATTCCCAGTTCAGTTGAAGCCACTTCC ACGGCATTCTTTCATCTGCAACTCCTGGGTCGGACCCAAACCAGCAGGGCCCTCTACCGC CGATGTAAACTCCGCCACGCCGACGGTAACAGTCGACGCCGCCGTATCGACAGACTCCAC ATCATTCGTGATCCGCGCTCGTAACAAGATCGGCCTGCTCCAAGTCATCACCAGGGTTTT CAAGGTCCTTGGCCTCCACATTGACAAGGCTACCGTGGAATTCGAAGGCGATTTCTTTAC CCAGAAGTTCTTCGTCACTGATTCTCATGGGAGGAAGATTGAGGATCAGGAAAATTTGGA CCGTATCACGAAGGCGCTGTTGGAGGCGATCGACGGTGGCGGTGGATGGGGCACGGAGAC GTCGGTGGGGCCGAGTACAAGAGGCATTGTGGTGAGAAGAGCTGGATTAGGGCCGAAGCC GCAGGCGGAGAGAATGTTTGCCTTGATGGATAGGTTTCTGTCGAATGATCCAGTCAGTCT TCAAAAGGATATTTTGGATCACGTTGAGTACACAGTGGCCAGGTCGCGATTTAGTTTTGA TGATTTTGAGGCCTATCAGGCATTAGCACATAGTGTAAGAGATCGATTGATCGAGCGTTG GCATGATACTCAACAGTATTTCAAGAGGAAAGACCCAAAGCGTCTATACTTCCTGTCTCT CGAGTTTCTTATGGGCCGTTCCTTGTCAAATAGTGTTATAAACCTTGGAATCCGGGACCA GTGTGCAGATGCTTTAAGCCAGCTTGGGTTTGAATATGAAGTTTTGGCAGAGCAGGAAGG GGATGCTGCTCTTGGTAATGGTGGTCTAGCTCGCCTTTCAGCATGTCAAATGGATTCCTT AGCAACACTAGACTATCCAGCATGGGGTTATGGACTACGCTACCAGTATGGGTTGTTCCG TCAGGTCATACTGGATGGATTTCAACATGAACAGCCTGATTATTGGTTAAATTTTGGAAA CCCATGGGAGATAGAGCGGGTTCATGTATCATATCCAGTGAAGTTCTATGGGACTGTTGA AGAGGAAACTTTGAATGGAAAAAGTTGTAAAGTTTGGTTACCTGGAGAAACGGTCGAAGC TGTAGCTTATGATAATCCAATACCTGGTTACGGAACAAGGAATACAATTAATCTCCGCCT TTGGGCTGCTAAGCCAGATGGTCAATATGATATGGAATCATATAATACTGGAGATTATAT CAATGCTGTTGTTAATAGACAAAGAGCTGAAACTATAAGCTGTGTTTTGTACCCTGATGA CCGTTCTTATCAGGGAAAGGAACTGAGGTTGAAACAACACTATTTCTTTGTCTCAGCATC CTTACAAGACATCATTCGAAGGTTCAAAGATGGTCACAATAACTTTGATGATTTCCCAGA GAAGGTTGCACTGCAGTTGAATGATACTCACCCATCTCTTGCAGTAGTTGAGGTCATGAG AGTGCTTGTTGATGAAGAACATTTAGGTTGGGACCAGGCATGGAACATTGTATGCAGAAT TTTCTCATTTACAACTCACACAGTATTACCTGAAGCGCTAGAGAAAATCCCTGTTGATCT CCTAGGCAGTCTTCTCCCACGCCACTTACAAATTATATATGACATAAACTTTAATTTCAT GGAGGAGTTGAAGAAGAGAATTGGTCTAGACTTCAACCGGTTGTCTCAGATGTCAATTGT GGAGGAAGGTGCTGTAAAGAGCATTCGAATGGCAAACCTGTCAATTGTTTGTTCTCATAC TGTGAATGGTGTTTCCAGGATGCATTCAGAGTTATTAAAAACACGAGTTTTCAAGGATTT TTATGAACTGTGGCCACACAAATTCCAGTATAAGACAAATGGGGTAACTCAGCGTCGCTG GATTGTGGTGAGCAATCCTAGTTTATGTGCTCTTATCTCAAAATGGCTTGGAACAGAAGC TTGGATCCGTGACATTGACCTCTTAATCGGGTTGCAAGAATTTGCAGCAGATGCTGATCT ACATCAAGAATGGAAGATGGTCAGAAAGGTTAATAAAATGAGGCTCGCAGAATACATTGA AGCAATGAGTGGTGTGAAGGTCAGTTTGGATGCAATGTTTGATGTGCAAATAAAGCGAAT ACACGAGTACAAAAGACAATTGCTTAATATACTCAGCATTATCCATCGATACGACTGCAT AAAGAATATGGAGAAGACTCAGAGAAGGAAAGTTGTACCTCGTGTCTGCATAGTTGGAGG GAAAGCTGCTCCTGGTTATGAAGTTGCTAAGAAGATTATCAAACTTTGTCATGCTGTAGC AGAGAAAATTAATAATGATGCTGACGTTGGAGATCTTCTCAAATTGATATTTGTCCCTGA TTATAATGTTTCTGTTGCTGAATTGGTAATACCAGGGGCTGACCTTTCACAGCACATAAG CACTGCTGGACATGAGGCATCAGGAACTGGCTGCATGAAGTTTTTGATGAATGGTTGTTT ACTTTTAGCTACAGCAGATGGATCTACAGTTGAAATTATTGAAGAAATAGGAGAAGAAAA CATGTTTTTATTTGGAGCAAAAGTGCATGAAGTTCCGGCATTGCGTGAGAAAAGTTCTGA TCATAAAGCACCTCTTCAATTTTCACACGTAGTAAGGATGGTTCGAGATGGCCATTTTGG CTTTAAAGACTACTTCAAATCATTATGTGATGGTGTAGAGGGTGATAGTGACTTCTATCT TCTGGGTTCTGATTTTGCTAGCTATCTAGAGGCTCAGGCTGCTGCTGATAAAGCATTTGT TGATCAAGAAAAGTGGACTCAGATGAGCATACTTAGCACTGCTGGTTCTGGGAGATTCAG CAGCGATAGAACAATTGAAGATTATGCAGAGACAACTTGGGGAATTGAACCATGCAAATG CCCCTCCTAATAATTCATTCCACATATAAGAAACAAGGAAATAGAGGAATCCACAGACAC CTAAATATTCAGAGATCTCAGCCATTCTGGCAGTGGGCTACAAATCATTTGCCTCTCTGC CTTTGAAGTGAGAACACTGGGTGGCTTACAGGGTTTTGCCTCTTATCACCAAAGAGGCTA GGCAACTCCCGCTACTGTATATTTATTAGTA