Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g00240.t01
CDS Infomation

cds chromosome:12X:10:1500980:1505621:-1 gene:VIT_10s0003g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCTCCGGATCACTCAATTAGAAACTGTAATGGAGGAAATTGTCCAAAACTTTAAT
GAAAAATACCTTTATCTGAAACAGCGCGAGAAGCTAATTGAGGAGTTTTCACATAAGATC
CATCATCTGCAGTCTGTTTTGTACAGTATTAAGGGTGACTCATCACATGCCAATGAAAGG
CTGGCTGCTCTAGAAGAGGAGGTACGACTTCTTTGGGCTGCTTCAAGAAAGAACAACTTT
GATCTTCATACTTTAGAATCCAAAGCACAAGATGCTGAAGACAGGTTGAACGTGGTCAGT
AAACAAGTTGAACAGCTGGCTGACGTTGTTACAGAACAGTGGATTCAAATTCAGCAACTT
GAGCAGGCTCTTCAAATGGCAGAACTTCGGGCTTTGAAGGCTAAAAGGCAAGTAAGCATG
ATGAGATGCACATTCTTAAAGTTCATCAACAACCTCTTTGGCAATCATCTTGAAAAAGTT
TTCGGGATGCTGGACCCATATTTATTTGGAAGAGGTTCTACTTTGAGTTCCTACAAGTCT
CGATTTCTGCATCAGTTGAAAAGAATGTGGTCAGCAGCTAAAGCCTATCATCATGAGTTA
CAAGGTTTCATAAAACAAGAAATGGAAAAATATGAGTTCACTGCAGCTCTTGCCAATGAT
GAATTGGTATTCTTTGTGGCTTCTGCTCTAATAACCTTCCCGATAATGGGTGCTTGGATG
TTGGTCTCATCACAATTCTGCTAG

Peptide Sequence

PEP ID

VIT_10s0003g00240.t01
PEP Infomation

pep chromosome:12X:10:1500980:1505621:-1 gene:VIT_10s0003g00240 transcript:VIT_10s0003g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLRITQLETVMEEIVQNFNEKYLYLKQREKLIEEFSHKIHHLQSVLYSIKGDSSHANER
LAALEEEVRLLWAASRKNNFDLHTLESKAQDAEDRLNVVSKQVEQLADVVTEQWIQIQQL
EQALQMAELRALKAKRQVSMMRCTFLKFINNLFGNHLEKVFGMLDPYLFGRGSTLSSYKS
RFLHQLKRMWSAAKAYHHELQGFIKQEMEKYEFTAALANDELVFFVASALITFPIMGAWM
LVSSQFC

Transcript Sequence

Transcript ID

VIT_10s0003g00240.t01
Transcript Infomation

cdna chromosome:12X:10:1500980:1505621:-1 gene:VIT_10s0003g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCTCCGGATCACTCAATTAGAAACTGTAATGGAGGAAATTGTCCAAAACTTTAAT
GAAAAATACCTTTATCTGAAACAGCGCGAGAAGCTAATTGAGGAGTTTTCACATAAGATC
CATCATCTGCAGTCTGTTTTGTACAGTATTAAGGGTGACTCATCACATGCCAATGAAAGG
CTGGCTGCTCTAGAAGAGGAGGTACGACTTCTTTGGGCTGCTTCAAGAAAGAACAACTTT
GATCTTCATACTTTAGAATCCAAAGCACAAGATGCTGAAGACAGGTTGAACGTGGTCAGT
AAACAAGTTGAACAGCTGGCTGACGTTGTTACAGAACAGTGGATTCAAATTCAGCAACTT
GAGCAGGCTCTTCAAATGGCAGAACTTCGGGCTTTGAAGGCTAAAAGGCAAGTAAGCATG
ATGAGATGCACATTCTTAAAGTTCATCAACAACCTCTTTGGCAATCATCTTGAAAAAGTT
TTCGGGATGCTGGACCCATATTTATTTGGAAGAGGTTCTACTTTGAGTTCCTACAAGTCT
CGATTTCTGCATCAGTTGAAAAGAATGTGGTCAGCAGCTAAAGCCTATCATCATGAGTTA
CAAGGTTTCATAAAACAAGAAATGGAAAAATATGAGTTCACTGCAGCTCTTGCCAATGAT
GAATTGGTATTCTTTGTGGCTTCTGCTCTAATAACCTTCCCGATAATGGGTGCTTGGATG
TTGGTCTCATCACAATTCTGCTAGCTGGGAAAATTTTCCACGTGAAGTAGACTGCTTATC
CAGATTGATGATAGCTAAAACATAAATTTGATAACTACCTTTCTGGGCCTGGATCGATAT
TATTGTCAGTGTCTCGTTTGTAACAA