Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0003g00180.t01
CDS Infomation

cds chromosome:12X:10:1466878:1470728:-1 gene:VIT_10s0003g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACACTGATTTTTGGGCTTCTCGTCTCGCTGCCGCGAAACGGCAGTACGCGTTGCAG
CACCACCACAACAGCTCCCAACTAGATCGGTTGAGCATCGATGATTTCGAGGTTGAGGAC
GAGGCCCGTCCCGATTTTCCCTGTCCGTACTGTTACGAGGATTACGACATCGCCTCTCTG
TGTTCGCATCTCGAAGACGAGCACTCGTGCGAATCAAGAGTCACTGTTTGTCCCATTTGC
TCTGTTAAAGTTGCACGGGACATGCTAAGTCATATCACCCTGCAACATGGACACTTATTC
AAGATATCCTTACGTCGCAGATTACGTAGAGTCGCAATTCCTAGTAGTCAGGCACTGTCT
CTCCTTGGTCGGGATCTTCGTGAGGCCCATCTGCAAGTGCTTCTAGGTAGTGGGGGATAT
CGGTCAAGCATTGCTAATGCATCTAATACGGTTACAGATCAATTTCTTTCATCACTTGGT
TTGAACTTCTCAGCAACTGAAGCAGAAGAAATTTCAAAATCTGTGTCATCCAGTGCTGAG
GACACTTCTACTATGAAAGCAGTATCAGCACATGCTTGGAAATCAAGGTACTGA

Peptide Sequence

PEP ID

VIT_10s0003g00180.t01
PEP Infomation

pep chromosome:12X:10:1466878:1470728:-1 gene:VIT_10s0003g00180 transcript:VIT_10s0003g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNTDFWASRLAAAKRQYALQHHHNSSQLDRLSIDDFEVEDEARPDFPCPYCYEDYDIASL
CSHLEDEHSCESRVTVCPICSVKVARDMLSHITLQHGHLFKISLRRRLRRVAIPSSQALS
LLGRDLREAHLQVLLGSGGYRSSIANASNTVTDQFLSSLGLNFSATEAEEISKSVSSSAE
DTSTMKAVSAHAWKSRY

Transcript Sequence

Transcript ID

VIT_10s0003g00180.t01
Transcript Infomation

cdna chromosome:12X:10:1466878:1470728:-1 gene:VIT_10s0003g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGCTTCGGTCATACCCACAAGCCCTTGTCTCTCTGAATCTCAGCCTTCCCTGTATCGA
CATGCATCCCCAAGAAAAGGTCAAATAAATCAGAAAAATAAGCGTCGACATTAACTTCTC
ACGGTTTCCTTCCTCTCTGTCTCTCCCCACTTCAATCCTCAAATCATGTCACCATAATTT
TCGTTTTTTTTTTCTTTGTTTTTCCTCTTTCTGAGGAAAACCCAATAAATATCTATACAG
CTGAATCAACAACATTTCTACCGTTAAGTACTAAGAATATTTATAGAAGTTCATCGTTCT
CTGTTCATCCTCTGATATTTCGATGAACACTGATTTTTGGGCTTCTCGTCTCGCTGCCGC
GAAACGGCAGTACGCGTTGCAGCACCACCACAACAGCTCCCAACTAGATCGGTTGAGCAT
CGATGATTTCGAGGTTGAGGACGAGGCCCGTCCCGATTTTCCCTGTCCGTACTGTTACGA
GGATTACGACATCGCCTCTCTGTGTTCGCATCTCGAAGACGAGCACTCGTGCGAATCAAG
AGTCACTGTTTGTCCCATTTGCTCTGTTAAAGTTGCACGGGACATGCTAAGTCATATCAC
CCTGCAACATGGACACTTATTCAAGATATCCTTACGTCGCAGATTACGTAGAGTCGCAAT
TCCTAGTAGTCAGGCACTGTCTCTCCTTGGTCGGGATCTTCGTGAGGCCCATCTGCAAGT
GCTTCTAGGTAGTGGGGGATATCGGTCAAGCATTGCTAATGCATCTAATACGGTTACAGA
TCAATTTCTTTCATCACTTGGTTTGAACTTCTCAGCAACTGAAGCAGAAGAAATTTCAAA
ATCTGTGTCATCCAGTGCTGAGGACACTTCTACTATGAAAGCAGTATCAGCACATGCTTG
GAAATCAAGGTACTGA