Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0070g00300.t01
CDS Infomation

cds chromosome:12X:9:13412885:13414668:1 gene:VIT_09s0070g00300 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6I3C6]
Sequence

ATGGCAAGTCATAACCAGGAGCATCTTTCCACTGAGATTGTGAACCGGGGCATCGCTGAT
TCTGGTCCATATGCAGGGTCCCTGAGCTTCTCTGTGAGAGTCAGGCGTGGCTTGCCAGAT
TTCCTTAATTCAGTTAACCTGAAATATGTGAAGCTTGGTTATGGTTACCTTATCAGCCAT
GGCTTTTACTTTCTAACTGCACCTGTTGTCCTTGTGATTTTTGGTGCCCAAATAGGAAAG
CTCACATGGGATGATTTTTGCTTGAAATGTGACCTTATGAATGCCCTCTTCATGATGGGG
TTACTGAGCTTAATACTCTACATTCATCTAGATTTAAAGCCTCGCTCTACTTATTTGGTT
GATTTTGCTTGTTATCGCCCACCTGATGAGCTTAAGACCTCAAAAGAGAAATTCATCGAA
TTGGCCAGAAAATCTGGCAACTTTGATGATGTTGCCATTGAATTTCAGCAGCGAGTGCTC
AAGAATTCTGGCATTGGAGATGAAACCTACTTGCCGACAGGAATATTTCATGCCGGTCAC
AGGAGAACCCTCAAGGATGGCAGGGAAGAAGCCGCAATGGTCATGTTTGGAGCTGTAAAT
GAGCTCCTTGCTGCCACTAAAATCAAGATCAAGGACATTAGAATCCTCATTGTAAACTGC
GGAATGCTGAATACGACTCCATCGCTCTCTGCCATGTTGGTGAACCACTTTAAGCTGGGG
CATTATGTTCAAAGCTTCAATCTTGGAGGCATGGGCTGTGCTGCAGGAGTAATAGCCATA
GATCTAGCAAGAGACCTTTTGAATGCCTACCGGGGCTCATATGCACTAGTTGTGAGCACG
GAAGCTGTGAGCTACTCTTGGTACAGCGGGAAAGACATCCACATGCTTCTTCCTAATTGC
TTCTTCCGAATGGGGGCTGCCGCCATGTTGCTCTCCAATTGCCACCTAGACCGATGGCGC
TCCAAGTACGAACTCAAACAGTTGGTCAGAACTCACAAAGGCATGGATAACAGAAGCTTC
AAAAGCATACTTCTCAAGGAAGATGGTGAAGGGAAACAAGGGCTGTCAGTGAGCAAAGAT
GTGGTTGAAGTGGGAAGCCATGCACTTAAGGACAACATCACAACCTTGGGACCTCTAGTT
CTTCCCTTTTCTGAACAACTCCATTTCTTCACCACTCTGCTCTTCCACAACTCCAAGCCT
TATATTCCTAACTACAAGCTCGCCTTCGAGCATGTTTGCATACTGGCCACCAGCAAGCAG
GTCCTAGATGAGATACAGAAGAACTTAAAGCTCACTGAGGAGTACATGGAGGCATCAAGA
AGAACTTTGGAGCGTTTTGGGAACACTTCTAGTAGTAGCATTTGGTACGAATTATCCTAC
TTGGAGGCAAACCGAAGGGTGAAGAGAGGAGATAGGATTTGGCAAATCGCATTTGGGTCG
GGTTTTAAGTGCAATAGTGTTGTTTGGAAGGCTCTTAGGAATGTTGGGATGCCCAAGCAC
AGCCCATGGTTTGAGAATTGA

Peptide Sequence

PEP ID

VIT_09s0070g00300.t01
PEP Infomation

pep chromosome:12X:9:13412885:13414668:1 gene:VIT_09s0070g00300 transcript:VIT_09s0070g00300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6I3C6]
Sequence

MASHNQEHLSTEIVNRGIADSGPYAGSLSFSVRVRRGLPDFLNSVNLKYVKLGYGYLISH
GFYFLTAPVVLVIFGAQIGKLTWDDFCLKCDLMNALFMMGLLSLILYIHLDLKPRSTYLV
DFACYRPPDELKTSKEKFIELARKSGNFDDVAIEFQQRVLKNSGIGDETYLPTGIFHAGH
RRTLKDGREEAAMVMFGAVNELLAATKIKIKDIRILIVNCGMLNTTPSLSAMLVNHFKLG
HYVQSFNLGGMGCAAGVIAIDLARDLLNAYRGSYALVVSTEAVSYSWYSGKDIHMLLPNC
FFRMGAAAMLLSNCHLDRWRSKYELKQLVRTHKGMDNRSFKSILLKEDGEGKQGLSVSKD
VVEVGSHALKDNITTLGPLVLPFSEQLHFFTTLLFHNSKPYIPNYKLAFEHVCILATSKQ
VLDEIQKNLKLTEEYMEASRRTLERFGNTSSSSIWYELSYLEANRRVKRGDRIWQIAFGS
GFKCNSVVWKALRNVGMPKHSPWFEN

Transcript Sequence

Transcript ID

VIT_09s0070g00300.t01
Transcript Infomation

cdna chromosome:12X:9:13412885:13414668:1 gene:VIT_09s0070g00300 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6I3C6]
Sequence

AATTTCATGGCAAGTCATAACCAGGAGCATCTTTCCACTGAGATTGTGAACCGGGGCATC
GCTGATTCTGGTCCATATGCAGGGTCCCTGAGCTTCTCTGTGAGAGTCAGGCGTGGCTTG
CCAGATTTCCTTAATTCAGTTAACCTGAAATATGTGAAGCTTGGTTATGGTTACCTTATC
AGCCATGGCTTTTACTTTCTAACTGCACCTGTTGTCCTTGTGATTTTTGGTGCCCAAATA
GGAAAGCTCACATGGGATGATTTTTGCTTGAAATGTGACCTTATGAATGCCCTCTTCATG
ATGGGGTTACTGAGCTTAATACTCTACATTCATCTAGATTTAAAGCCTCGCTCTACTTAT
TTGGTTGATTTTGCTTGTTATCGCCCACCTGATGAGCTTAAGACCTCAAAAGAGAAATTC
ATCGAATTGGCCAGAAAATCTGGCAACTTTGATGATGTTGCCATTGAATTTCAGCAGCGA
GTGCTCAAGAATTCTGGCATTGGAGATGAAACCTACTTGCCGACAGGAATATTTCATGCC
GGTCACAGGAGAACCCTCAAGGATGGCAGGGAAGAAGCCGCAATGGTCATGTTTGGAGCT
GTAAATGAGCTCCTTGCTGCCACTAAAATCAAGATCAAGGACATTAGAATCCTCATTGTA
AACTGCGGAATGCTGAATACGACTCCATCGCTCTCTGCCATGTTGGTGAACCACTTTAAG
CTGGGGCATTATGTTCAAAGCTTCAATCTTGGAGGCATGGGCTGTGCTGCAGGAGTAATA
GCCATAGATCTAGCAAGAGACCTTTTGAATGCCTACCGGGGCTCATATGCACTAGTTGTG
AGCACGGAAGCTGTGAGCTACTCTTGGTACAGCGGGAAAGACATCCACATGCTTCTTCCT
AATTGCTTCTTCCGAATGGGGGCTGCCGCCATGTTGCTCTCCAATTGCCACCTAGACCGA
TGGCGCTCCAAGTACGAACTCAAACAGTTGGTCAGAACTCACAAAGGCATGGATAACAGA
AGCTTCAAAAGCATACTTCTCAAGGAAGATGGTGAAGGGAAACAAGGGCTGTCAGTGAGC
AAAGATGTGGTTGAAGTGGGAAGCCATGCACTTAAGGACAACATCACAACCTTGGGACCT
CTAGTTCTTCCCTTTTCTGAACAACTCCATTTCTTCACCACTCTGCTCTTCCACAACTCC
AAGCCTTATATTCCTAACTACAAGCTCGCCTTCGAGCATGTTTGCATACTGGCCACCAGC
AAGCAGGTCCTAGATGAGATACAGAAGAACTTAAAGCTCACTGAGGAGTACATGGAGGCA
TCAAGAAGAACTTTGGAGCGTTTTGGGAACACTTCTAGTAGTAGCATTTGGTACGAATTA
TCCTACTTGGAGGCAAACCGAAGGGTGAAGAGAGGAGATAGGATTTGGCAAATCGCATTT
GGGTCGGGTTTTAAGTGCAATAGTGTTGTTTGGAAGGCTCTTAGGAATGTTGGGATGCCC
AAGCACAGCCCATGGTTTGAGAATTGAGAAT