Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0070g00050.t01
CDS Infomation

cds chromosome:12X:9:12954271:12958767:-1 gene:VIT_09s0070g00050 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S12 [Source:UniProtKB/TrEMBL;Acc:D7U865]
Sequence

ATGACACAACACGACATGATCGACCTACGAGCTTATGGGTCATGCCAAACCACTTATTTG
GTTTGCATGAGTCCACCCACCCCGACACAATTTTTCAATGGGTCGTATTGGTCTAGCACA
TTGGGCAAAAATGACCCACTAAACATTGGGCCATGTCAGCTGACATGGCCATGGGACACC
TCTATAAATACATATGGAAAAGGTTTCTGTTATCCTCATCAAACAAGGAAGGAGGTAGAT
TTGAACATCCACAAGAAAATGTCTGGTGAAGAGGTTGTTGTTGCAGTTGAAACATCAGCT
CCAGCTCCAGCTCTAGGTGAGCCCATGGACCTCATGACAGCCTTGCAGCTTGTGTTGAGG
AAATCACTGGCTCATGGTGGGCTTGCTCGAGGCCTTCACGAAGGTGCAAAGGTGATTGAG
AAACATGCTGCTCATCTGTGTGTTTTGGCAGAGGATTGCAACCAACCAGACTATGTTAAA
CTGGTGAAGGCACTTTGTGCTGATCACAATGTTAGCTTGATAACTGTTCCTAGTGCTAAG
ACGCTGGGCGAGTGGGCTGGGTTATGTAAGATTGACTCCGAAGGGAAGGCCAGGAAAGTG
GTGGGCTGCTCCTGTGTTGTCGTTAAGGACTTTGGGGAGGAAACTGAAGCTATGAATGTT
GTCCAGCAGCAGGTGAAGTCTCACTAA

Peptide Sequence

PEP ID

VIT_09s0070g00050.t01
PEP Infomation

pep chromosome:12X:9:12954271:12958767:-1 gene:VIT_09s0070g00050 transcript:VIT_09s0070g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S12 [Source:UniProtKB/TrEMBL;Acc:D7U865]
Sequence

MTQHDMIDLRAYGSCQTTYLVCMSPPTPTQFFNGSYWSSTLGKNDPLNIGPCQLTWPWDT
SINTYGKGFCYPHQTRKEVDLNIHKKMSGEEVVVAVETSAPAPALGEPMDLMTALQLVLR
KSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKALCADHNVSLITVPSAK
TLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQVKSH

Transcript Sequence

Transcript ID

VIT_09s0070g00050.t01
Transcript Infomation

cdna chromosome:12X:9:12954271:12958767:-1 gene:VIT_09s0070g00050 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S12 [Source:UniProtKB/TrEMBL;Acc:D7U865]
Sequence

ATGACACAACACGACATGATCGACCTACGAGCTTATGGGTCATGCCAAACCACTTATTTG
GTTTGCATGAGTCCACCCACCCCGACACAATTTTTCAATGGGTCGTATTGGTCTAGCACA
TTGGGCAAAAATGACCCACTAAACATTGGGCCATGTCAGCTGACATGGCCATGGGACACC
TCTATAAATACATATGGAAAAGGTTTCTGTTATCCTCATCAAACAAGGAAGGAGGTAGAT
TTGAACATCCACAAGAAAATGTCTGGTGAAGAGGTTGTTGTTGCAGTTGAAACATCAGCT
CCAGCTCCAGCTCTAGGTGAGCCCATGGACCTCATGACAGCCTTGCAGCTTGTGTTGAGG
AAATCACTGGCTCATGGTGGGCTTGCTCGAGGCCTTCACGAAGGTGCAAAGGTGATTGAG
AAACATGCTGCTCATCTGTGTGTTTTGGCAGAGGATTGCAACCAACCAGACTATGTTAAA
CTGGTGAAGGCACTTTGTGCTGATCACAATGTTAGCTTGATAACTGTTCCTAGTGCTAAG
ACGCTGGGCGAGTGGGCTGGGTTATGTAAGATTGACTCCGAAGGGAAGGCCAGGAAAGTG
GTGGGCTGCTCCTGTGTTGTCGTTAAGGACTTTGGGGAGGAAACTGAAGCTATGAATGTT
GTCCAGCAGCAGGTGAAGTCTCACTAAGCGAGTAGAGCAATCAAACTTAGATTTAGTGAG
GGTCTATGTCGGAGGTTTTTTTTATGTGTAGAAACCTTTTATTTTTCCCTTAGTGAGCAT
GGGCTTAGGAAGATTTTGATTTATTGTTTTTGGGTTTCATATAACTAGAATGGACCTGAT
TTTGCATTGTTGAAGTAATTCCATTTTAATATACACTATTGGTTGAATCTTCCAATTT