Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0054g01360.t01
CDS Infomation

cds chromosome:12X:9:22300742:22304109:-1 gene:VIT_09s0054g01360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCCCAGAGTTTTGGCTCTTCCCTTCTCGTCTTCCTATGCATCCAGCAAAAATGTGG
TGCCACTGTCGGTTGGTTTACATGCCCATAAAAGAGCTCTTCCTTCAACCATATAATGAA
ATCAATTGGAAGAAAGTACGACATCTTTGTGCGAAGGAGGATCTCTACTACTCCCATCCC
CTAATACAAGATCTGATGTGGGATAGTTTGTACATATGTACTGAGCCTCTTCTTACTCGT
TGGCCCTTCAACAAGTTGAGACAGAAGGCTCTTGAAGTAACAATGAAACACATCCATTAT
GAAGATGAAAACAGTCGATACATAACCATTGGATGTGTGGCGAAGGTATTGTGTATGCTC
TCATGTTGGGTTGAAGATCCAAATGGGGATTATTTCAAGAAGCACCTTGCTAGGATCCCA
GATTATATATGGGTTGCAGAAGATGGAATAAAGATGCAGAGCTTTGGTAGTCAAGAGTGG
GACACTAGTTTTGCCCTTCAAGCACTGCTAGCTTGCAATATGACTGATGAACTTGGACCT
GCACTCAAGAAAGGACATGAATTCATAAAGGAATCTCAGGTCAAGGACAATCCTTCTGGT
GACTTTAAAAGCATGTACCGCCACATTTCCAAGGGATCGTGGACATTCTCAGATCAGGAT
CATGGTTGGCAAGTTTCTGATTGCACTGCAGAAGGTTTGAAGTGTTGTCTCCTCTTTTCA
ATGATGACACCAGAGATTGTTGGTATGAAGATGGAACCTGAACGACTATTTGATTCTGTC
AACATCTTGCTTTCTCTACAGAGTAAAAATGGTGGTTTAGCTGCCTGGGAGCCTGCAGGA
GCTTCAGAATGGTTGGAGCTACTTAACCCCACTGAATTTTTTCCAGACATTGTCATCGAG
CATGAGTATGTTGAGTGCACTGCATCAGCAATTAAGGCTCTAGTTTCTTTTAAGAAGTTA
CACCCGGGACACAGGAAGAAGGAGATAGACAATTTCATCACAAATGCTGCTAAGTACATT
GAAGACATGCAAATGCCTGATGGCTCATGGTATGGCAATTGGGGAGTATGTTTCACCTAT
GGCTCATGGTTTGCGCTTGGGGGCCTAGCAGCTGCTGGCAAGACTTACCACAACTGTCTT
GCTATTGGTAGAGCTGTTGAGTTTCTACTCAAATCACAAAGAGATGATGGTGGTTGGGGA
GAGAACTGTACTTCTTGCTCGGACAAGAAATATATGCCTCTTGAAGGAAACAAGTCAAAT
TTGGTGCAAACCGGGTGGGCTCTGATGGGGCTGCTTTCTTCAGGGCAGGCGGAGAGAGAC
CCAACACCTCTTCACAGGGCTGCAAAGCTGTTTATTAATTCCCAAATGGAAGATGGTGAT
TTTCCCCAACAGGAAATCACTGGAGCCTTCATGAAGAACTGCTTGTTACACTATGCAGAT
TACAGGAATATTTTTCCATTGTGGGCTCTTGCAGAGTATGTAAGTGAGTGCCATCGCCTT
AAGTCTGGTTGCATTGCCATGCCAAAGAAGTATCTGTAG

Peptide Sequence

PEP ID

VIT_09s0054g01360.t01
PEP Infomation

pep chromosome:12X:9:22300742:22304109:-1 gene:VIT_09s0054g01360 transcript:VIT_09s0054g01360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPEFWLFPSRLPMHPAKMWCHCRLVYMPIKELFLQPYNEINWKKVRHLCAKEDLYYSHP
LIQDLMWDSLYICTEPLLTRWPFNKLRQKALEVTMKHIHYEDENSRYITIGCVAKVLCML
SCWVEDPNGDYFKKHLARIPDYIWVAEDGIKMQSFGSQEWDTSFALQALLACNMTDELGP
ALKKGHEFIKESQVKDNPSGDFKSMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLFS
MMTPEIVGMKMEPERLFDSVNILLSLQSKNGGLAAWEPAGASEWLELLNPTEFFPDIVIE
HEYVECTASAIKALVSFKKLHPGHRKKEIDNFITNAAKYIEDMQMPDGSWYGNWGVCFTY
GSWFALGGLAAAGKTYHNCLAIGRAVEFLLKSQRDDGGWGENCTSCSDKKYMPLEGNKSN
LVQTGWALMGLLSSGQAERDPTPLHRAAKLFINSQMEDGDFPQQEITGAFMKNCLLHYAD
YRNIFPLWALAEYVSECHRLKSGCIAMPKKYL

Transcript Sequence

Transcript ID

VIT_09s0054g01360.t01
Transcript Infomation

cdna chromosome:12X:9:22300742:22304109:-1 gene:VIT_09s0054g01360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACAATGCTTGTGCAAGAGGGCGTAAATGGATCCTCGATCGTGGTGGAGTGACATCCCT
TCCCTCTTGGGGAAAGACTTGGCTTTCAATTTTTGGCTTGTTTGACTGGTCAGGAAGCAA
CCCAATGCCCCCAGAGTTTTGGCTCTTCCCTTCTCGTCTTCCTATGCATCCAGCAAAAAT
GTGGTGCCACTGTCGGTTGGTTTACATGCCCATAAAAGAGCTCTTCCTTCAACCATATAA
TGAAATCAATTGGAAGAAAGTACGACATCTTTGTGCGAAGGAGGATCTCTACTACTCCCA
TCCCCTAATACAAGATCTGATGTGGGATAGTTTGTACATATGTACTGAGCCTCTTCTTAC
TCGTTGGCCCTTCAACAAGTTGAGACAGAAGGCTCTTGAAGTAACAATGAAACACATCCA
TTATGAAGATGAAAACAGTCGATACATAACCATTGGATGTGTGGCGAAGGTATTGTGTAT
GCTCTCATGTTGGGTTGAAGATCCAAATGGGGATTATTTCAAGAAGCACCTTGCTAGGAT
CCCAGATTATATATGGGTTGCAGAAGATGGAATAAAGATGCAGAGCTTTGGTAGTCAAGA
GTGGGACACTAGTTTTGCCCTTCAAGCACTGCTAGCTTGCAATATGACTGATGAACTTGG
ACCTGCACTCAAGAAAGGACATGAATTCATAAAGGAATCTCAGGTCAAGGACAATCCTTC
TGGTGACTTTAAAAGCATGTACCGCCACATTTCCAAGGGATCGTGGACATTCTCAGATCA
GGATCATGGTTGGCAAGTTTCTGATTGCACTGCAGAAGGTTTGAAGTGTTGTCTCCTCTT
TTCAATGATGACACCAGAGATTGTTGGTATGAAGATGGAACCTGAACGACTATTTGATTC
TGTCAACATCTTGCTTTCTCTACAGAGTAAAAATGGTGGTTTAGCTGCCTGGGAGCCTGC
AGGAGCTTCAGAATGGTTGGAGCTACTTAACCCCACTGAATTTTTTCCAGACATTGTCAT
CGAGCATGAGTATGTTGAGTGCACTGCATCAGCAATTAAGGCTCTAGTTTCTTTTAAGAA
GTTACACCCGGGACACAGGAAGAAGGAGATAGACAATTTCATCACAAATGCTGCTAAGTA
CATTGAAGACATGCAAATGCCTGATGGCTCATGGTATGGCAATTGGGGAGTATGTTTCAC
CTATGGCTCATGGTTTGCGCTTGGGGGCCTAGCAGCTGCTGGCAAGACTTACCACAACTG
TCTTGCTATTGGTAGAGCTGTTGAGTTTCTACTCAAATCACAAAGAGATGATGGTGGTTG
GGGAGAGAACTGTACTTCTTGCTCGGACAAGAAATATATGCCTCTTGAAGGAAACAAGTC
AAATTTGGTGCAAACCGGGTGGGCTCTGATGGGGCTGCTTTCTTCAGGGCAGGCGGAGAG
AGACCCAACACCTCTTCACAGGGCTGCAAAGCTGTTTATTAATTCCCAAATGGAAGATGG
TGATTTTCCCCAACAGGAAATCACTGGAGCCTTCATGAAGAACTGCTTGTTACACTATGC
AGATTACAGGAATATTTTTCCATTGTGGGCTCTTGCAGAGTATGTAAGTGAGTGCCATCG
CCTTAAGTCTGGTTGCATTGCCATGCCAAAGAAGTATCTGTAG