Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0054g00600.t01
CDS Infomation

cds chromosome:12X:9:21395921:21400945:1 gene:VIT_09s0054g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCCCTCTCAAGCTCTGTATTCGTCTCCAAGTTCTCTGAAACACGCCCTGTTTTC
CACACTCCACCACCTTCTTCTTCGTCTTCTTCATCTTTTTCTTGTTCTTTAGTCAAGATA
TCCAATAAGCGAAGTGGGTCTCTCAAAATCGTCGACACTTCTCCTTCTCTCAGGCTTCGT
GCGCTCTCGGGAGACGTCTCGGGAGATGTCGAGGGCGAAGACGCAAGTGGGTTTGGGTTG
GCTTCTGAGGAGAGCGTCTCTTCTTTGTCGCAGGGTAATTTAAATCACAATCAGAGTCCT
GAAAAGGGTGTGGATGAAATGTCGAAGATGGAGATGCCCCTTACAGTCTCACATGGAAGC
ATAACAGGTGGTGGAACAAGGGCTGGCCTTTTTAGAACACCGATTTCTGGTGGAGTTCAG
AGTGCAACCTCAGCGCATGGTTTGCCCCGGCCAGCCTTAGCAGTCCGCAATCTGATGGAG
CAGGCCAGATTTGCTCATCTGTGTACTGTAATGTCCCGGATGCACCACCGGCGAGAAGGA
TATCCATTTGGTTCTTTGGTAGATTTTGCACCTGACTCAATGGGGCATCCTATATTTTCA
TTTTCACCATTGGCCATCCACACACGAAATTTGTTAGCCGACCCTAGATGCACACTTGTT
GTTCAGATACCTGGGTGGAGTGGCTTATCAAATGCGAGAGTAACAATTTTTGGCGATGTT
TTCCCGCTCCCAGAACATCAACAGGAATGGGCACACAAGCAGTACATAGCAAAGCATCTG
CAGGGGCCTTCTCAACAGTGGGGAAACTTCTACTACTTTAGGATGCAGAACATCAGTGAC
ATATATTTCATCGGAGGCTTTGGCACTGTTGCTTGGGTTGATGTCAAGGAATATGAGGCT
CTCCAACCTGATAAAATTGCAGTTGATGGGGGCGAGCAGAACCTAAAGGAACTCAACGCA
GTTTTCTCAAAGCCCTTGAAAGAGCTTCTTTCAATGGAAGCAGAAATAGACGATGCTGCT
CTCATATCAATCGACAGCAAGGGAACTGATATCCGGGTTCGTCAAGGCGCCCAGTTCAAC
ATACAGAGGATACCCTTTGAAGAAGGGCATGCAGTTGAAACACTGGAGGAAGCCAAGGCT
GCACTCTGGAAATTAATAAACCAAGGTAGAGTCTACAACATGCAGAAATAA

Peptide Sequence

PEP ID

VIT_09s0054g00600.t01
PEP Infomation

pep chromosome:12X:9:21395921:21400945:1 gene:VIT_09s0054g00600 transcript:VIT_09s0054g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEALSSSVFVSKFSETRPVFHTPPPSSSSSSSFSCSLVKISNKRSGSLKIVDTSPSLRLR
ALSGDVSGDVEGEDASGFGLASEESVSSLSQGNLNHNQSPEKGVDEMSKMEMPLTVSHGS
ITGGGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREG
YPFGSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDV
FPLPEHQQEWAHKQYIAKHLQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWVDVKEYEA
LQPDKIAVDGGEQNLKELNAVFSKPLKELLSMEAEIDDAALISIDSKGTDIRVRQGAQFN
IQRIPFEEGHAVETLEEAKAALWKLINQGRVYNMQK

Transcript Sequence

Transcript ID

VIT_09s0054g00600.t01
Transcript Infomation

cdna chromosome:12X:9:21395921:21400945:1 gene:VIT_09s0054g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAACACAATCCGTCTCTTCCTTCAAAAACCTAAGAGTGAGGGTGGCACGAAGCACAGTGG
TGTGCTTTCAAAACCGCAAAAATCAATCTTTCCCAATAAAACCCTTGTAGAAAAAGGCCT
TTTTTCACTGTATATTCACAGCATCTCAGCCATGGAAGCCCTCTCAAGCTCTGTATTCGT
CTCCAAGTTCTCTGAAACACGCCCTGTTTTCCACACTCCACCACCTTCTTCTTCGTCTTC
TTCATCTTTTTCTTGTTCTTTAGTCAAGATATCCAATAAGCGAAGTGGGTCTCTCAAAAT
CGTCGACACTTCTCCTTCTCTCAGGCTTCGTGCGCTCTCGGGAGACGTCTCGGGAGATGT
CGAGGGCGAAGACGCAAGTGGGTTTGGGTTGGCTTCTGAGGAGAGCGTCTCTTCTTTGTC
GCAGGGTAATTTAAATCACAATCAGAGTCCTGAAAAGGGTGTGGATGAAATGTCGAAGAT
GGAGATGCCCCTTACAGTCTCACATGGAAGCATAACAGGTGGTGGAACAAGGGCTGGCCT
TTTTAGAACACCGATTTCTGGTGGAGTTCAGAGTGCAACCTCAGCGCATGGTTTGCCCCG
GCCAGCCTTAGCAGTCCGCAATCTGATGGAGCAGGCCAGATTTGCTCATCTGTGTACTGT
AATGTCCCGGATGCACCACCGGCGAGAAGGATATCCATTTGGTTCTTTGGTAGATTTTGC
ACCTGACTCAATGGGGCATCCTATATTTTCATTTTCACCATTGGCCATCCACACACGAAA
TTTGTTAGCCGACCCTAGATGCACACTTGTTGTTCAGATACCTGGGTGGAGTGGCTTATC
AAATGCGAGAGTAACAATTTTTGGCGATGTTTTCCCGCTCCCAGAACATCAACAGGAATG
GGCACACAAGCAGTACATAGCAAAGCATCTGCAGGGGCCTTCTCAACAGTGGGGAAACTT
CTACTACTTTAGGATGCAGAACATCAGTGACATATATTTCATCGGAGGCTTTGGCACTGT
TGCTTGGGTTGATGTCAAGGAATATGAGGCTCTCCAACCTGATAAAATTGCAGTTGATGG
GGGCGAGCAGAACCTAAAGGAACTCAACGCAGTTTTCTCAAAGCCCTTGAAAGAGCTTCT
TTCAATGGAAGCAGAAATAGACGATGCTGCTCTCATATCAATCGACAGCAAGGGAACTGA
TATCCGGGTTCGTCAAGGCGCCCAGTTCAACATACAGAGGATACCCTTTGAAGAAGGGCA
TGCAGTTGAAACACTGGAGGAAGCCAAGGCTGCACTCTGGAAATTAATAAACCAAGGTAG
AGTCTACAACATGCAGAAATAAAAATAAAAATAAAACATGGGGTGTTTTCTCGCAGAAAC
GGGTGCGTAATTTTGCAGAATAATAGGTACTGGAAGAAGTACCAGGTAACAGTGATTTGT
ATGATAAGTGCTGTTCTATTCGCGAGTTAAACAATCCCAGAAGACGAAAATCTCATGTTT
TAAATGGATGATGGTCTTATGAAGGCAGTGATTTGTATGATAAGTGCTGTTCTATTCGCG
AGTTAAACAATCCCAGAAGACGAAAATCTCATGTTTTAAATGGATGATGGTCTTATGAAG
GCAAGAATGGAGAAAACATATCCACCCTAGAGTGTTTTTTTTTTTTTTTTTTTTTTTTTT
TTGTGTAATGATAAATCTTGTGAACTAACTCTTGCTTGGGTTATGCTGGAGATGGGGTTT
TCTTTTTCCTAAGAAAATGGGGTATTTTCCGAGAAAATCCATATGGGTAACTAACTGCCA
AATGCCAAG