Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0018g02080.t01
CDS Infomation

cds chromosome:12X:9:19877495:19887205:-1 gene:VIT_09s0018g02080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta [Source:UniProtKB/TrEMBL;Acc:F6HBV4]
Sequence

ATGGAGAGATCGTGCAGTCTCCTCATCCACTTCGACAAGGCCACGCCCGCCATGGCCAAC
GAGATCAAACAGGCCTTGGAATCCAACGACGTCGACGCCAAAATCGACGCGATGAAGAAA
GCCATTTTGATGATCCTCAACGGAGAATCTATTCCCCAACTCTTCATCACCATTATCCGC
TACGTCCTCCCATCGGAGGACCACATCATCCAAAGGCTCCTCCTTCTCTATCTCGAAACC
CTAAAAAAGACAGACTCCACCGGCCGGATGCTGCCGGAGATGATCCTCGTGATTCAGAAC
CTCCGCAACAACCTCCAGCACCCCAACGAGTACATCCGCGGCGTCTGCCTCCGCTTCCTG
TGCCGCGTCGCCGAGCCCGAGCTCATCGAGCCTCTGGTACCCTCAATCATCGGAAACCTT
GAGCACCGCCACCCCTTTGTTCGGCGGAACGCGGTGCTCGCGCTTATGTCGATCTATGGC
CTCCCTCATGGCGAGCAGTTGCTGGATCACGCTCCCGAGCTGATCCAGCAGCTGCTGGTC
TCGGAGCTGGACGCTTCCGTTAAGCGGAATGCGTTCTTGATGTTGTTTAATTGTGCACAA
TTTAAGGCTGTTGATTATGTTTTCAGTAATATTGATAGGGTTCCGGATTGGGATGAGCAG
ATGCAGATGGTGGTGTTGGAATTGATTAAGAAGGTTTGTAGGACAAATAAGGATGAAAAG
GGGAAGTACATTAAGATAATTATATCTTTGTTGAACTCGCCCTTGACTGCGGTTATATAC
GAGTGTGCAAATACTCTAATGTCCTTGTCATCTGCCCCGACTGCCATTAGGGCTGCGGCA
AACACATACTGTCAGCTGTTGCTGTCACAGAGTGATAACAATGTTAAGCTTATTGTGTTA
GATAGGCTCAATGAGCTTAAGTCTTTGCATAGGGGGGTCGTGGTTGAGATGATTATGGAT
GTGCTTAGGGCCTTATCGAGTCCAAGTCTTGACATTAGGAGGAAAACAATTGATATTGCG
CTTGATTTGATAACCCCGAAGAATGTTGATGAGGTTGTGCTTGTGCTGAAGAAGGAGGTG
GTGAAGACACAGAGTGTTGAGCTTGAGAAGAATGGGGAGTATAGGCAAATGCTTATACAA
GGGATACATTCTTGTGCGATTAAGTTCCCAGAGGTGGCAAGCACGGTTGTTCTTCTTTTG
ATGGATTTCTTGGGGGACAACAATGTTGCTTCTGCCATAGATGTGATTGTTTTTGTGCGT
GAGATTATTGAAACGAATCCAAAGTTACGGGTATCAATAATAACAAGGCTTTTGGACACT
TTTTACCAGATCCGTGCTGCTAGGGTGTGTTCTTGTGCTCTTTGGATCATTGGAGAGTAC
TGCCTCTCTATTCCGGAAGTTGAGAGTGGAATTGAGACAATTAAGCAGTGTCTTGGGGAG
CTCCCATTCTTCACGGCTAGTGAGGAAGGAGATGCACCCAATGCTCTGAAGAGTTCTCAA
CAGGTGAACTCTATTACTGTATCTTCTAGACGTCCTGCTATTCTTGCAGATGGGACCTAT
GCCACACAGAGTGCAGCCATAGAAACTACCTTGTCACCACAAACCCTTGTTCAAGGATCA
TTGGCTTTGGTTGGAAACTTGAGATCATTGATTCTTTCAGGCGACTTTTTCCTCGGGGCA
GTTGTTGCTTGCACACTGACAAAGCTTGTTTTGCGATTGGAAGATGTTCAGGAATTGAAA
ACTGAAGTGAACAAATTATCTACAGAAGTCTTATTGATCATGGTTTCTATGCTGCAACTG
GGTCGGTCCTCGTATTTCCCACACCCAATCGACAATGATTCTTATGATAGGATTGTCCTT
TGTATCAGATTGCTATGTAACACTGGTGATGAGATTAGGAAGATATGGCTGCAGTCTTGC
CGACAGAGTTTTGTTAAAATGCTGGCTGATAAGCAGTTTCGTGAAACAGAGGAAATTAAA
GCAAAGGCTCAAATTTCCCATGCACAGCCAGATGATCTTATTGACTTCTATCATCTCAAA
AGCAGGAAGGGTATGAGCCAGCTTGAACTGGAAGATGAGGTGCAAGATGATCTCAAATGT
GCTACTGGAGGGTTCACAAAGGATGGAGATGATGTAAATAAACTTAATCGCATTCTTCAG
CTCACAGGATTCAGTGACCCTGTCTATGCTGAAGCGTATGTAACAGTTCATCATTATGAC
ATTGTCCTTGATGTTACCATCATCAATCGAACCAAGCTGACCCTCCAGAATTTGTGCTTG
GAGTTGGCAACCATGGGTGATCTCAAACTTGTGGAGCACCCACAAAACTATTCATTAGCT
CCCCGATCAAGCAAGCAGATTAAGGCAAATATTAAGGTTTCTTCAACTGAAACAGGGGTC
ATATTTGGTAACATTGTTTATGAGACTTCAAATGTGCTTGAACGAAATGTTATTGTCCTC
AATGACATCCATATTGATATAATGGATTACATTTCTCCGGCATCCTGTGCTGATGTGGCA
TTTAGAACCATGTGGGCTGAGTTTGAGTGGGAAAACAAGGTTGCTGTAAACACTATTATT
GAAGAAGAGAAAGAATTTTTGGACCATATAATCAAGTCAACTAACATGAAGTGCCTTACT
CCACTCTCGGCATTAGATGGGGAGTGTGGGTTCCTTGCAGCAAACCTATACGCAAAGAGC
GTATTTGGAGAGGATGCTTTAGTAAATGTGAGCATTGAGAAACAAGCCAATAGCAAAATA
ACTGGATTCATCAGAATACGAAGTAAAACTCAAGGAATTGCTCTCAGTCTCGGGGATAAA
ATCACTCTCAAACAGAAGGGAAGCAGTTGA

Peptide Sequence

PEP ID

VIT_09s0018g02080.t01
PEP Infomation

pep chromosome:12X:9:19877495:19887205:-1 gene:VIT_09s0018g02080 transcript:VIT_09s0018g02080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta [Source:UniProtKB/TrEMBL;Acc:F6HBV4]
Sequence

MERSCSLLIHFDKATPAMANEIKQALESNDVDAKIDAMKKAILMILNGESIPQLFITIIR
YVLPSEDHIIQRLLLLYLETLKKTDSTGRMLPEMILVIQNLRNNLQHPNEYIRGVCLRFL
CRVAEPELIEPLVPSIIGNLEHRHPFVRRNAVLALMSIYGLPHGEQLLDHAPELIQQLLV
SELDASVKRNAFLMLFNCAQFKAVDYVFSNIDRVPDWDEQMQMVVLELIKKVCRTNKDEK
GKYIKIIISLLNSPLTAVIYECANTLMSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSLHRGVVVEMIMDVLRALSSPSLDIRRKTIDIALDLITPKNVDEVVLVLKKEV
VKTQSVELEKNGEYRQMLIQGIHSCAIKFPEVASTVVLLLMDFLGDNNVASAIDVIVFVR
EIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSIPEVESGIETIKQCLGE
LPFFTASEEGDAPNALKSSQQVNSITVSSRRPAILADGTYATQSAAIETTLSPQTLVQGS
LALVGNLRSLILSGDFFLGAVVACTLTKLVLRLEDVQELKTEVNKLSTEVLLIMVSMLQL
GRSSYFPHPIDNDSYDRIVLCIRLLCNTGDEIRKIWLQSCRQSFVKMLADKQFRETEEIK
AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKCATGGFTKDGDDVNKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKLTLQNLCLELATMGDLKLVEHPQNYSLA
PRSSKQIKANIKVSSTETGVIFGNIVYETSNVLERNVIVLNDIHIDIMDYISPASCADVA
FRTMWAEFEWENKVAVNTIIEEEKEFLDHIIKSTNMKCLTPLSALDGECGFLAANLYAKS
VFGEDALVNVSIEKQANSKITGFIRIRSKTQGIALSLGDKITLKQKGSS

Transcript Sequence

Transcript ID

VIT_09s0018g02080.t01
Transcript Infomation

cdna chromosome:12X:9:19877495:19887205:-1 gene:VIT_09s0018g02080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta [Source:UniProtKB/TrEMBL;Acc:F6HBV4]
Sequence

CTGGATTTCCTGATCCCCACTTTCGGTCGTCCACCACCAAATACGGTGTGTCTCGATCTC
CCCCTCCCTTCCTCTAGAGTTTGGCCTGCAACATCTCCATCTCTGCAACCATCAATGGAG
AGATCGTGCAGTCTCCTCATCCACTTCGACAAGGCCACGCCCGCCATGGCCAACGAGATC
AAACAGGCCTTGGAATCCAACGACGTCGACGCCAAAATCGACGCGATGAAGAAAGCCATT
TTGATGATCCTCAACGGAGAATCTATTCCCCAACTCTTCATCACCATTATCCGCTACGTC
CTCCCATCGGAGGACCACATCATCCAAAGGCTCCTCCTTCTCTATCTCGAAACCCTAAAA
AAGACAGACTCCACCGGCCGGATGCTGCCGGAGATGATCCTCGTGATTCAGAACCTCCGC
AACAACCTCCAGCACCCCAACGAGTACATCCGCGGCGTCTGCCTCCGCTTCCTGTGCCGC
GTCGCCGAGCCCGAGCTCATCGAGCCTCTGGTACCCTCAATCATCGGAAACCTTGAGCAC
CGCCACCCCTTTGTTCGGCGGAACGCGGTGCTCGCGCTTATGTCGATCTATGGCCTCCCT
CATGGCGAGCAGTTGCTGGATCACGCTCCCGAGCTGATCCAGCAGCTGCTGGTCTCGGAG
CTGGACGCTTCCGTTAAGCGGAATGCGTTCTTGATGTTGTTTAATTGTGCACAATTTAAG
GCTGTTGATTATGTTTTCAGTAATATTGATAGGGTTCCGGATTGGGATGAGCAGATGCAG
ATGGTGGTGTTGGAATTGATTAAGAAGGTTTGTAGGACAAATAAGGATGAAAAGGGGAAG
TACATTAAGATAATTATATCTTTGTTGAACTCGCCCTTGACTGCGGTTATATACGAGTGT
GCAAATACTCTAATGTCCTTGTCATCTGCCCCGACTGCCATTAGGGCTGCGGCAAACACA
TACTGTCAGCTGTTGCTGTCACAGAGTGATAACAATGTTAAGCTTATTGTGTTAGATAGG
CTCAATGAGCTTAAGTCTTTGCATAGGGGGGTCGTGGTTGAGATGATTATGGATGTGCTT
AGGGCCTTATCGAGTCCAAGTCTTGACATTAGGAGGAAAACAATTGATATTGCGCTTGAT
TTGATAACCCCGAAGAATGTTGATGAGGTTGTGCTTGTGCTGAAGAAGGAGGTGGTGAAG
ACACAGAGTGTTGAGCTTGAGAAGAATGGGGAGTATAGGCAAATGCTTATACAAGGGATA
CATTCTTGTGCGATTAAGTTCCCAGAGGTGGCAAGCACGGTTGTTCTTCTTTTGATGGAT
TTCTTGGGGGACAACAATGTTGCTTCTGCCATAGATGTGATTGTTTTTGTGCGTGAGATT
ATTGAAACGAATCCAAAGTTACGGGTATCAATAATAACAAGGCTTTTGGACACTTTTTAC
CAGATCCGTGCTGCTAGGGTGTGTTCTTGTGCTCTTTGGATCATTGGAGAGTACTGCCTC
TCTATTCCGGAAGTTGAGAGTGGAATTGAGACAATTAAGCAGTGTCTTGGGGAGCTCCCA
TTCTTCACGGCTAGTGAGGAAGGAGATGCACCCAATGCTCTGAAGAGTTCTCAACAGGTG
AACTCTATTACTGTATCTTCTAGACGTCCTGCTATTCTTGCAGATGGGACCTATGCCACA
CAGAGTGCAGCCATAGAAACTACCTTGTCACCACAAACCCTTGTTCAAGGATCATTGGCT
TTGGTTGGAAACTTGAGATCATTGATTCTTTCAGGCGACTTTTTCCTCGGGGCAGTTGTT
GCTTGCACACTGACAAAGCTTGTTTTGCGATTGGAAGATGTTCAGGAATTGAAAACTGAA
GTGAACAAATTATCTACAGAAGTCTTATTGATCATGGTTTCTATGCTGCAACTGGGTCGG
TCCTCGTATTTCCCACACCCAATCGACAATGATTCTTATGATAGGATTGTCCTTTGTATC
AGATTGCTATGTAACACTGGTGATGAGATTAGGAAGATATGGCTGCAGTCTTGCCGACAG
AGTTTTGTTAAAATGCTGGCTGATAAGCAGTTTCGTGAAACAGAGGAAATTAAAGCAAAG
GCTCAAATTTCCCATGCACAGCCAGATGATCTTATTGACTTCTATCATCTCAAAAGCAGG
AAGGGTATGAGCCAGCTTGAACTGGAAGATGAGGTGCAAGATGATCTCAAATGTGCTACT
GGAGGGTTCACAAAGGATGGAGATGATGTAAATAAACTTAATCGCATTCTTCAGCTCACA
GGATTCAGTGACCCTGTCTATGCTGAAGCGTATGTAACAGTTCATCATTATGACATTGTC
CTTGATGTTACCATCATCAATCGAACCAAGCTGACCCTCCAGAATTTGTGCTTGGAGTTG
GCAACCATGGGTGATCTCAAACTTGTGGAGCACCCACAAAACTATTCATTAGCTCCCCGA
TCAAGCAAGCAGATTAAGGCAAATATTAAGGTTTCTTCAACTGAAACAGGGGTCATATTT
GGTAACATTGTTTATGAGACTTCAAATGTGCTTGAACGAAATGTTATTGTCCTCAATGAC
ATCCATATTGATATAATGGATTACATTTCTCCGGCATCCTGTGCTGATGTGGCATTTAGA
ACCATGTGGGCTGAGTTTGAGTGGGAAAACAAGGTTGCTGTAAACACTATTATTGAAGAA
GAGAAAGAATTTTTGGACCATATAATCAAGTCAACTAACATGAAGTGCCTTACTCCACTC
TCGGCATTAGATGGGGAGTGTGGGTTCCTTGCAGCAAACCTATACGCAAAGAGCGTATTT
GGAGAGGATGCTTTAGTAAATGTGAGCATTGAGAAACAAGCCAATAGCAAAATAACTGGA
TTCATCAGAATACGAAGTAAAACTCAAGGAATTGCTCTCAGTCTCGGGGATAAAATCACT
CTCAAACAGAAGGGAAGCAGTTGAATG