Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0018g01940.t01
CDS Infomation

cds chromosome:12X:9:19536441:19551673:-1 gene:VIT_09s0018g01940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A5B2Z7]
Sequence

ATGGCTCTATCAACATCTCTTCGTTCCAATCTCATCAAACCCCTCACCGCCCTCACCGCC
TTATCATCCACCCACCATCTCCGCAGTCCCTTTTCCTCTTCCGCCGACGACACCACCGTC
CTCACCATCGAGACCAGCGTCCCCTTTATCGGCCACAGATGCGAGCCACCCTCGCGCAAC
GTCGAAACCACTCCCAAAGAGGTGCTCGGATTCTTCCGCGATATGGCGTTGATGCGCCGG
ATGGAGATTGCTTCCGACTCCCTCTATAAATCCAAGCTGATCCGCGGTTTCTGCCACCTC
TACGATGGACAGGAAGCGGTGGCAGTTGGTATGGAGGCCGCAATTACCAGAAGGGATTGC
ATCATCACCGCCTATCGCGACCACTGCATCTACCTCGGCCGCGGCGGAACCCTATTCGAG
TGCTTCTCCGAACTCATGGGCCGCCAGTCTGGGTGTTCCAAGGGGAAAGGTGGCTCCATG
CATTTCTACAAGAAGGAAAACGGTTTCTATGGCGGCCACGGTATCGTCGGAGCTCAAATT
CCTCTTGGTTGCGGGCTGGCCTTTGCGCAGAAGTACTCCAAAGACGAGACTGTGACGTTC
GCCATGTACGGTGATGGAGCAGCGAACCAGGGGCAGTTGTTCGAGGCGCTTAATATGGCG
GCACTTTGGGATTTGCCGGCGATTTTGGTTTGCGAGAACAATCACTATGGAATGGGTACG
GCAGAGTGGAGAGCAGCCAAGAGTCCAGCATATTACAAGCGTGGGGACTATGTGCCTGGG
TTGAAGGTAGATGGTATGGATGTTCTTGCTGTGAAACAGGCATGCAGATTTGCTAAGGAG
CATGCTTTAAAAAATGGACCCATTATTCTTGAAATGGACACTTATAGGTACCATGGTCAC
TCCATGTCTGATCCTGGGAGTACATACCGTACGCGTGATGAGATTTCTGGTGTGAGACAG
GAGCGTGATGCAATTGAAAGAGTAAGAAAGCTGATCTTATCTCATGAGCTGTCTACTGAA
GCGGAACTAAAGAGTATTGAGAAGGAAATCAGAGGTCAAGTAGATGACGCTATTGCACGA
GCCAAGGAAAGTCCAATGCCAGATCCTTCTGAACTCTTCACCAACGTATATGTGAAAGGT
TTTGGGATTGAGGTGGCAGGAGCAGATAGGAAAGAAGTCAGAGGGGTGCTTCCATGA

Peptide Sequence

PEP ID

VIT_09s0018g01940.t01
PEP Infomation

pep chromosome:12X:9:19536441:19551673:-1 gene:VIT_09s0018g01940 transcript:VIT_09s0018g01940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A5B2Z7]
Sequence

MALSTSLRSNLIKPLTALTALSSTHHLRSPFSSSADDTTVLTIETSVPFIGHRCEPPSRN
VETTPKEVLGFFRDMALMRRMEIASDSLYKSKLIRGFCHLYDGQEAVAVGMEAAITRRDC
IITAYRDHCIYLGRGGTLFECFSELMGRQSGCSKGKGGSMHFYKKENGFYGGHGIVGAQI
PLGCGLAFAQKYSKDETVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGT
AEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACRFAKEHALKNGPIILEMDTYRYHGH
SMSDPGSTYRTRDEISGVRQERDAIERVRKLILSHELSTEAELKSIEKEIRGQVDDAIAR
AKESPMPDPSELFTNVYVKGFGIEVAGADRKEVRGVLP

Transcript Sequence

Transcript ID

VIT_09s0018g01940.t01
Transcript Infomation

cdna chromosome:12X:9:19536441:19551673:-1 gene:VIT_09s0018g01940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A5B2Z7]
Sequence

CCTTCCTTTCCCTCGCCTCTCCCTGACTCTCACCAACCCCCTTTCTCTGCCCTTTGAGCA
ACAAACCAGTCGTTTCAAATCGCAGATCAGGGAAGAAATCCAACGGACCAGATGGCTCTA
TCAACATCTCTTCGTTCCAATCTCATCAAACCCCTCACCGCCCTCACCGCCTTATCATCC
ACCCACCATCTCCGCAGTCCCTTTTCCTCTTCCGCCGACGACACCACCGTCCTCACCATC
GAGACCAGCGTCCCCTTTATCGGCCACAGATGCGAGCCACCCTCGCGCAACGTCGAAACC
ACTCCCAAAGAGGTGCTCGGATTCTTCCGCGATATGGCGTTGATGCGCCGGATGGAGATT
GCTTCCGACTCCCTCTATAAATCCAAGCTGATCCGCGGTTTCTGCCACCTCTACGATGGA
CAGGAAGCGGTGGCAGTTGGTATGGAGGCCGCAATTACCAGAAGGGATTGCATCATCACC
GCCTATCGCGACCACTGCATCTACCTCGGCCGCGGCGGAACCCTATTCGAGTGCTTCTCC
GAACTCATGGGCCGCCAGTCTGGGTGTTCCAAGGGGAAAGGTGGCTCCATGCATTTCTAC
AAGAAGGAAAACGGTTTCTATGGCGGCCACGGTATCGTCGGAGCTCAAATTCCTCTTGGT
TGCGGGCTGGCCTTTGCGCAGAAGTACTCCAAAGACGAGACTGTGACGTTCGCCATGTAC
GGTGATGGAGCAGCGAACCAGGGGCAGTTGTTCGAGGCGCTTAATATGGCGGCACTTTGG
GATTTGCCGGCGATTTTGGTTTGCGAGAACAATCACTATGGAATGGGTACGGCAGAGTGG
AGAGCAGCCAAGAGTCCAGCATATTACAAGCGTGGGGACTATGTGCCTGGGTTGAAGGTA
GATGGTATGGATGTTCTTGCTGTGAAACAGGCATGCAGATTTGCTAAGGAGCATGCTTTA
AAAAATGGACCCATTATTCTTGAAATGGACACTTATAGGTACCATGGTCACTCCATGTCT
GATCCTGGGAGTACATACCGTACGCGTGATGAGATTTCTGGTGTGAGACAGGAGCGTGAT
GCAATTGAAAGAGTAAGAAAGCTGATCTTATCTCATGAGCTGTCTACTGAAGCGGAACTA
AAGAGTATTGAGAAGGAAATCAGAGGTCAAGTAGATGACGCTATTGCACGAGCCAAGGAA
AGTCCAATGCCAGATCCTTCTGAACTCTTCACCAACGTATATGTGAAAGGTTTTGGGATT
GAGGTGGCAGGAGCAGATAGGAAAGAAGTCAGAGGGGTGCTTCCATGAGATCCAAAATTA
CCAAAATGTTCCAACAGCCCCACCCAAAATAAATAAAATGTGTTAACTGTGCTTCCATGA
GATCCAAAATTCCCAAAAGGTTCCAACAGCTCCACCAAAATAAATAAAAGGTGTCAAGTG
ATGAGGGTCATGTCTTGCTGTATCCTCTTTGACCCTTATTCCCTGTACAGAAAATTGATT
CTTCTCAAGTCACGGTGTAGAATTTTTACCTAAGAGGTATGTATGTAGTTTTTTGGGGGT
GTTTGCAATCCAACATTTCTATGACTAATTTGAATGTGGTGCTTTTGTGCTTCTGTCATC
ACTGGCAATCATATTTCACTTTGATTAGTGAAAAGTTTCTTTACACAAA