Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_09s0018g01870.t01
CDS Infomation	cds chromosome:12X:9:19476936:19482695:1 gene:VIT_09s0018g01870 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6HBZ6]
Sequence	ATGGCTTCCGTTTCAGCCAAAATCATTTCCTCCACCGCCGCCGCCGTCGCCACCGCCACC GGAGGCAACACCACCACCACCAGATCATCCTGTCTCCCCGTCTTCCGCCGCGGCCCCGCC ACTCCTCTCCCCCTAAAACTCTCCCGCCGCCGCCGCCACCATGTCCGCCACATCACCAAC GTCTTCAAAACCGTGGAGTCCCCTGCGGCCCCTCCGACGCTCGATCCGGTCCGGCAGGTT CAGAAGCCGACGATTCTGGTGTCGGAGAAGCTGGGAGAGGCAGGGCTGGAGGTGCTGAGA GAGTTCGGGGAGGTGGAGTGCAGCTACGATCTGTCGCAGGAGGATCTGTGCAAGAAGATC TCGCTCTGCGATGCGCTGATCGTGAGGAGCGGCACGAAGGTGACGAGAGCGGTGTTCGAG GCCGCCAAGGGGCGGTTGAAGGTGGTAGGGAGGGCCGGAGTCGGGATCGACAATGTGGAT CTGCAGGCGGCGACGGAGTTCGGATGCTTGGTGGTGAACGCGCCGACGGCGAACACTATC GCCGCGGCGGAGCACGGCATCGCGCTGCTAGCTGCCATGGCCAGAAATGTTGCTCAGGCT GACGCTTCGATGAAAGCTGGAAAATGGCAACGTAACAAGTATGTCGGTGTCTCTTTGGTT GGGAAGACATTAGCTGTTATGGGATTTGGAAAAGTAGGATCTGAAGTTGCAAGACGAGCA AAAGGCCTGGGAATGCATGTCATTGCACATGATCCATATGCCCCAGCTGACAGAGCCCGA GCTGCTGGTGTCGATTTGGTCTCTTTTGATCTGGCTATCTCAACTGCTGATTTCATCTCT CTGCATATGCCACTCACTCCTACTACCAAAAAGATATTCAATGATGAAACATTTGCAAAG GTGAAGAAGGGAGTCCGCATCATTAATGTCGCTAGGGGTGGAGTCATAGACGAAGATGCA TTAGTGAGGGCCCTTGATAGTGGAGCAGTTGCTCAGGCAGCACTTGATGTGTTCACAGAG GAGCCCCCACCAAAGGACAGCAAATTAGTGCAGCACGAAAATGTTACTGTGACACCTCAT CTTGGAGCTAGCACAAAGGAAGCACAGGAAGGTGTAGCCATTGAAATTGCAGAGGCTGTA GTTGGAGCTCTGAGAGGGGAACTCTCTGCCACTGCTGTCAATGCTCCTATGGTCCCTCCC GAGGTTATCTCGGAGCTGTCTCCTTATGTTGTGCTAGCAGAGAAGCTGGGTAGGCTAGCT GTACAACTAGTGGCTGGAGGGAGTGGAATTAAATCTGTGAAGGTGGTGTATAAAACAGCC CGGGACCCAGATGATTTGGACACAAGACTCCTCAGAGCCATGGTCACTAAAGGCATCATT GAGCCAATATCCAGCTCATTCATCAACCTGGTGAATGCAGACTTCACAGCCAAGCAGAAA GGCCTCCGCATTAGTGAGGAGCGGGTGAGCATCGACTCGTCCCCTGAGAACCCAGTCGAA TCAATCCAGGTGCAAATATCCAACGTGGATTCAAAATTCGCAAGCGCTGTATCCGAGAAC GAATACATAAGCATTGAAGGGAAAGTGAAAGATGGGATCCCCCGCCTCACATGTGTCGGC TCTTTCAGTGTGGATGTGAGCCTGGAGGGAAATCTCATCCTGTGCCGACAGGTAGACCAA CCTGGCATGATCGGACGGGTTGGCAACATACTTGGAGAATGCAATGTGAACGTGAGCTTC ATGAGTGTAGGAAGAACTGTCAAGAGAACACGCGCCATCATGGCTATTGGTGTGGACGAA GAACCCGACAAGGACACCCTCAAGAAGATAGGAGAGGTGCCTGCAATTGAAGAGTTTGTG TTTCTCAAACTATAG

Peptide Sequence

PEP ID	VIT_09s0018g01870.t01
PEP Infomation	pep chromosome:12X:9:19476936:19482695:1 gene:VIT_09s0018g01870 transcript:VIT_09s0018g01870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6HBZ6]
Sequence	MASVSAKIISSTAAAVATATGGNTTTTRSSCLPVFRRGPATPLPLKLSRRRRHHVRHITN VFKTVESPAAPPTLDPVRQVQKPTILVSEKLGEAGLEVLREFGEVECSYDLSQEDLCKKI SLCDALIVRSGTKVTRAVFEAAKGRLKVVGRAGVGIDNVDLQAATEFGCLVVNAPTANTI AAAEHGIALLAAMARNVAQADASMKAGKWQRNKYVGVSLVGKTLAVMGFGKVGSEVARRA KGLGMHVIAHDPYAPADRARAAGVDLVSFDLAISTADFISLHMPLTPTTKKIFNDETFAK VKKGVRIINVARGGVIDEDALVRALDSGAVAQAALDVFTEEPPPKDSKLVQHENVTVTPH LGASTKEAQEGVAIEIAEAVVGALRGELSATAVNAPMVPPEVISELSPYVVLAEKLGRLA VQLVAGGSGIKSVKVVYKTARDPDDLDTRLLRAMVTKGIIEPISSSFINLVNADFTAKQK GLRISEERVSIDSSPENPVESIQVQISNVDSKFASAVSENEYISIEGKVKDGIPRLTCVG SFSVDVSLEGNLILCRQVDQPGMIGRVGNILGECNVNVSFMSVGRTVKRTRAIMAIGVDE EPDKDTLKKIGEVPAIEEFVFLKL

Transcript Sequence

Transcript ID	VIT_09s0018g01870.t01
Transcript Infomation	cdna chromosome:12X:9:19476936:19482695:1 gene:VIT_09s0018g01870 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6HBZ6]
Sequence	ATGGCTTCCGTTTCAGCCAAAATCATTTCCTCCACCGCCGCCGCCGTCGCCACCGCCACC GGAGGCAACACCACCACCACCAGATCATCCTGTCTCCCCGTCTTCCGCCGCGGCCCCGCC ACTCCTCTCCCCCTAAAACTCTCCCGCCGCCGCCGCCACCATGTCCGCCACATCACCAAC GTCTTCAAAACCGTGGAGTCCCCTGCGGCCCCTCCGACGCTCGATCCGGTCCGGCAGGTT CAGAAGCCGACGATTCTGGTGTCGGAGAAGCTGGGAGAGGCAGGGCTGGAGGTGCTGAGA GAGTTCGGGGAGGTGGAGTGCAGCTACGATCTGTCGCAGGAGGATCTGTGCAAGAAGATC TCGCTCTGCGATGCGCTGATCGTGAGGAGCGGCACGAAGGTGACGAGAGCGGTGTTCGAG GCCGCCAAGGGGCGGTTGAAGGTGGTAGGGAGGGCCGGAGTCGGGATCGACAATGTGGAT CTGCAGGCGGCGACGGAGTTCGGATGCTTGGTGGTGAACGCGCCGACGGCGAACACTATC GCCGCGGCGGAGCACGGCATCGCGCTGCTAGCTGCCATGGCCAGAAATGTTGCTCAGGCT GACGCTTCGATGAAAGCTGGAAAATGGCAACGTAACAAGTATGTCGGTGTCTCTTTGGTT GGGAAGACATTAGCTGTTATGGGATTTGGAAAAGTAGGATCTGAAGTTGCAAGACGAGCA AAAGGCCTGGGAATGCATGTCATTGCACATGATCCATATGCCCCAGCTGACAGAGCCCGA GCTGCTGGTGTCGATTTGGTCTCTTTTGATCTGGCTATCTCAACTGCTGATTTCATCTCT CTGCATATGCCACTCACTCCTACTACCAAAAAGATATTCAATGATGAAACATTTGCAAAG GTGAAGAAGGGAGTCCGCATCATTAATGTCGCTAGGGGTGGAGTCATAGACGAAGATGCA TTAGTGAGGGCCCTTGATAGTGGAGCAGTTGCTCAGGCAGCACTTGATGTGTTCACAGAG GAGCCCCCACCAAAGGACAGCAAATTAGTGCAGCACGAAAATGTTACTGTGACACCTCAT CTTGGAGCTAGCACAAAGGAAGCACAGGAAGGTGTAGCCATTGAAATTGCAGAGGCTGTA GTTGGAGCTCTGAGAGGGGAACTCTCTGCCACTGCTGTCAATGCTCCTATGGTCCCTCCC GAGGTTATCTCGGAGCTGTCTCCTTATGTTGTGCTAGCAGAGAAGCTGGGTAGGCTAGCT GTACAACTAGTGGCTGGAGGGAGTGGAATTAAATCTGTGAAGGTGGTGTATAAAACAGCC CGGGACCCAGATGATTTGGACACAAGACTCCTCAGAGCCATGGTCACTAAAGGCATCATT GAGCCAATATCCAGCTCATTCATCAACCTGGTGAATGCAGACTTCACAGCCAAGCAGAAA GGCCTCCGCATTAGTGAGGAGCGGGTGAGCATCGACTCGTCCCCTGAGAACCCAGTCGAA TCAATCCAGGTGCAAATATCCAACGTGGATTCAAAATTCGCAAGCGCTGTATCCGAGAAC GAATACATAAGCATTGAAGGGAAAGTGAAAGATGGGATCCCCCGCCTCACATGTGTCGGC TCTTTCAGTGTGGATGTGAGCCTGGAGGGAAATCTCATCCTGTGCCGACAGGTAGACCAA CCTGGCATGATCGGACGGGTTGGCAACATACTTGGAGAATGCAATGTGAACGTGAGCTTC ATGAGTGTAGGAAGAACTGTCAAGAGAACACGCGCCATCATGGCTATTGGTGTGGACGAA GAACCCGACAAGGACACCCTCAAGAAGATAGGAGAGGTGCCTGCAATTGAAGAGTTTGTG TTTCTCAAACTATAGAAGAGCACATTGATCCAATGCTTGTGATATAAGTTCAATTTTTGT CTTGGGGTGACTTGCCAATAAAAGGAGGGTGTCAGGCAAATAAAGCAGTCAGCTCTGCGT CTCCATGGTTGCCCAGAATGTGAGTTTATGCAGTGATAGTCCGTCACCCTGCTATATAAA AGGAAACGGGAGGTAGTTTGTGTCGGTGTGGTGGCATTCATCATCAAAGTCTATAGTCAG GTGGTGGCATTCATCCACTTATGTGCCATCTCTTTTGTTGTCTTGTACTAGTAGTAAGCT GTTGTCCGTGTTTTTGTTGTTTTCGGTATTGTTGAAGGGGAGCAGTTCCATACAGGCGGC TAGTATGGCTCCTAGGATTTTTAGTTGTGAGTTACAAGCTGCCAACTGAACTTTCCTCCA AGTTGTAATTCACATTTGTAGGAAAAATGGTATGTGAATCATAGAGGTTGCTCCCTTTTT TACTTTGCAAAAA