Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0018g01390.t01
CDS Infomation

cds chromosome:12X:9:18394181:18410703:-1 gene:VIT_09s0018g01390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGAAGAAGTACCCGATCGGCCCGGAGTTCTACACGCTGTACGAGGAGATAGGG
CAGGGCGTCAGCGCTTCGGTGCTCCGCGCGCTGTGCGTGCCGCTCAATGAGATCGTCGCC
ATCAAGATCCTCGACTTTGAGCGGGACAATTGCGATCTTAATAATATTTCTCGTGAAGCG
CAAACAATGAATCTGGTTGACCACCCTAACGTTCTTAAATCACACTGCTCATTTGTTAGT
GAACACAATTTGTGGGTTGTCATGCCATATATGGCTGGGGGTTCTTGTCTTAACATTTTG
AAGGCTGCCTATCCTGATGGTCTAGAGGAGGTAGTTATCGCAACAATCTTACGTGAGGTA
TTGAAGGGTTTAGAGTATCTTCATCACCATGGGCACATACATCGAGATGTCAAGGCTGGA
AATATTCTCATTGATGCACGTGGTGCAATCAAACTGGGAGATTTTGGTGTTTCTGCTTGC
CTCTTTGATTCGGGTGATAGGCAGCGTTCAAGGAACACATTTGTGGGGACACCTTGCTGG
ATGGCCCCTGAGGTTATGGAGCAGTTACATGGTTATGACTTCAAGGCTGATATCTGGTCT
TTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAATATCCTCCT
ATGAAGGTCCTGCTTATGACTTTGCAAAATGCTCCCCCTGGCCTTGATTATGAAAGAGAT
AGAAAATTTTCTAAGTCTTTTAAGCAGATGATTGCAAGTTGCTTGGTAAAAGATCCTTCA
AAACGACCTTCTGCAAAAAAGTTGCTAAAGCATCCTTTCTTTAAGCAAGCTAGGTCAAGT
GATTATATAGGACGAACACTTTTGGAGGGGCTGCCTGATCTTGGTGAGCGTATTAAAGAA
TTGAAGAGGAAAGAAGAAGATATGCTTGCACAAAAAAAAATGCCAGATGGGGAAAAGGAG
GAGCTATCACAGAATGAATATAAACGGGGGATTAGTGGTTGGAATTTCAATCTTGAAGAT
GTAAAGGCTCAGGCTTCCCTGATCCCAGATGTCGAGGATTCTGGGTCTGATTTAGGAGGG
AGCTCGAATTCTTTGTCTGGGCTTGATGTGCATGAGAAACAATCCTCTATGGGTCATCTT
TCACAAGTTGCAGAGGAAGGTAGTGATTTGATGCAGAATCTGCCAGTTCCTCTTCCATCA
GTTGACTCAGCCATTAATAATATCAGAGTTCAATCTTATAAATCTGATGACGAATCGAGC
ATTGCCAGTTCAAGCCATGAACACCATATTTCACAGGGTTCTTCTCCTCGTCATGATGAT
CAAATTGAAAATAATTTGGCTGAAAAACCTGATCCAGAAATTAGTGAAAAATTATTGGAT
ATGGCTATTCAATCTCAGAAGGTTGGGAGTTCGTCTGACAGCACCAGTTCACTAGAAGTC
AATTGTCCTGTGAAAGGAGAAAGTGGTAACTTGCAAAATCAGCTTAGGAAGATGTCAAGT
TGTAATGGAACAACAGTTGTGACAGTAGTAGACGAGGCACCTTCTGAAATAATTTCTAGG
ACATCCAAATCATCAGCAAACAGTGATGAACCTGATGAGAGAGCAAAGATGCCAGTTGTT
CAGCAAAGAGGACGTTTCAAGGTCACATCTGAGAATGTTGACTTAGAAAAGGTGGTTTCA
TCTCCAATGCTGCAAAAGAGTCACAGCTTTCAGCTCTTAGGTGTTGGATTTGCTGCTGCA
GTTCATGAAACATCTAAAGAGTAA

Peptide Sequence

PEP ID

VIT_09s0018g01390.t01
PEP Infomation

pep chromosome:12X:9:18394181:18410703:-1 gene:VIT_09s0018g01390 transcript:VIT_09s0018g01390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKKKYPIGPEFYTLYEEIGQGVSASVLRALCVPLNEIVAIKILDFERDNCDLNNISREA
QTMNLVDHPNVLKSHCSFVSEHNLWVVMPYMAGGSCLNILKAAYPDGLEEVVIATILREV
LKGLEYLHHHGHIHRDVKAGNILIDARGAIKLGDFGVSACLFDSGDRQRSRNTFVGTPCW
MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD
RKFSKSFKQMIASCLVKDPSKRPSAKKLLKHPFFKQARSSDYIGRTLLEGLPDLGERIKE
LKRKEEDMLAQKKMPDGEKEELSQNEYKRGISGWNFNLEDVKAQASLIPDVEDSGSDLGG
SSNSLSGLDVHEKQSSMGHLSQVAEEGSDLMQNLPVPLPSVDSAINNIRVQSYKSDDESS
IASSSHEHHISQGSSPRHDDQIENNLAEKPDPEISEKLLDMAIQSQKVGSSSDSTSSLEV
NCPVKGESGNLQNQLRKMSSCNGTTVVTVVDEAPSEIISRTSKSSANSDEPDERAKMPVV
QQRGRFKVTSENVDLEKVVSSPMLQKSHSFQLLGVGFAAAVHETSKE

Transcript Sequence

Transcript ID

VIT_09s0018g01390.t01
Transcript Infomation

cdna chromosome:12X:9:18394181:18410703:-1 gene:VIT_09s0018g01390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATACAAACGCCTTCTCTCTCTTTCTTTCTATCACGAGAAAGCAGAAACTCAGCCTCCTCC
TCATCAATGCGCTTCTCATCATCATCATCATCCTCATGCCCTTCCCTTTTCCTACATTGA
ATTTGTGATTTCTTCTATCTCCCGAAATATCTCCGCTCTCTCCGCTGCCTGCAGGTTCCT
CCGTGTCTGCTGCTCCGTTTTCTGTCCCTGAGCCTCAGATTGAGAGTTTTTGGATCTGTG
AGCTGCTGCGATTTGAGAGAGATGGAGAAGAAGAAGTACCCGATCGGCCCGGAGTTCTAC
ACGCTGTACGAGGAGATAGGGCAGGGCGTCAGCGCTTCGGTGCTCCGCGCGCTGTGCGTG
CCGCTCAATGAGATCGTCGCCATCAAGATCCTCGACTTTGAGCGGGACAATTGCGATCTT
AATAATATTTCTCGTGAAGCGCAAACAATGAATCTGGTTGACCACCCTAACGTTCTTAAA
TCACACTGCTCATTTGTTAGTGAACACAATTTGTGGGTTGTCATGCCATATATGGCTGGG
GGTTCTTGTCTTAACATTTTGAAGGCTGCCTATCCTGATGGTCTAGAGGAGGTAGTTATC
GCAACAATCTTACGTGAGGTATTGAAGGGTTTAGAGTATCTTCATCACCATGGGCACATA
CATCGAGATGTCAAGGCTGGAAATATTCTCATTGATGCACGTGGTGCAATCAAACTGGGA
GATTTTGGTGTTTCTGCTTGCCTCTTTGATTCGGGTGATAGGCAGCGTTCAAGGAACACA
TTTGTGGGGACACCTTGCTGGATGGCCCCTGAGGTTATGGAGCAGTTACATGGTTATGAC
TTCAAGGCTGATATCTGGTCTTTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCT
CCTTTCTCAAAATATCCTCCTATGAAGGTCCTGCTTATGACTTTGCAAAATGCTCCCCCT
GGCCTTGATTATGAAAGAGATAGAAAATTTTCTAAGTCTTTTAAGCAGATGATTGCAAGT
TGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAAAAAAGTTGCTAAAGCATCCTTTC
TTTAAGCAAGCTAGGTCAAGTGATTATATAGGACGAACACTTTTGGAGGGGCTGCCTGAT
CTTGGTGAGCGTATTAAAGAATTGAAGAGGAAAGAAGAAGATATGCTTGCACAAAAAAAA
ATGCCAGATGGGGAAAAGGAGGAGCTATCACAGAATGAATATAAACGGGGGATTAGTGGT
TGGAATTTCAATCTTGAAGATGTAAAGGCTCAGGCTTCCCTGATCCCAGATGTCGAGGAT
TCTGGGTCTGATTTAGGAGGGAGCTCGAATTCTTTGTCTGGGCTTGATGTGCATGAGAAA
CAATCCTCTATGGGTCATCTTTCACAAGTTGCAGAGGAAGGTAGTGATTTGATGCAGAAT
CTGCCAGTTCCTCTTCCATCAGTTGACTCAGCCATTAATAATATCAGAGTTCAATCTTAT
AAATCTGATGACGAATCGAGCATTGCCAGTTCAAGCCATGAACACCATATTTCACAGGGT
TCTTCTCCTCGTCATGATGATCAAATTGAAAATAATTTGGCTGAAAAACCTGATCCAGAA
ATTAGTGAAAAATTATTGGATATGGCTATTCAATCTCAGAAGGTTGGGAGTTCGTCTGAC
AGCACCAGTTCACTAGAAGTCAATTGTCCTGTGAAAGGAGAAAGTGGTAACTTGCAAAAT
CAGCTTAGGAAGATGTCAAGTTGTAATGGAACAACAGTTGTGACAGTAGTAGACGAGGCA
CCTTCTGAAATAATTTCTAGGACATCCAAATCATCAGCAAACAGTGATGAACCTGATGAG
AGAGCAAAGATGCCAGTTGTTCAGCAAAGAGGACGTTTCAAGGTCACATCTGAGAATGTT
GACTTAGAAAAGGTGGTTTCATCTCCAATGCTGCAAAAGAGTCACAGCTTTCAGCTCTTA
GGTGTTGGATTTGCTGCTGCAGTTCATGAAACATCTAAAGAGTAA