Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0018g01220.t01
CDS Infomation

cds chromosome:12X:9:18105560:18107342:1 gene:VIT_09s0018g01220 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7T401]
Sequence

ATGGCTCAAGAACCCACCTCTGCTCACCTCTTTGTCGATGATTTCTACTTCTCAGCCCTC
CTGGATCAGCTTGAAGATACTGAAGATTTCGTAGTTTCAGACGCCAAGTATGCGGAAGAG
CTGCAGTTTCAAGAGGCCTTAATGGCATCCGTAGAGGCCGCATCTAATACTGCTGTCCAA
GAAACTGCGCCATCAATAAAAGAAATAGGTTCAAGCTCAGGCTCAAGCAGTGCTGCAGAC
GCTGCTGTTGATATGGCCGTGGTGGAAGAAGGCCAAACATCGGAGAATTTCTGCGAGATT
TGCGCGGAAAGGAGGGGGTTGGATGAGATGTTTAGGAGTGGGAAATGTTGCCATACATTC
TGCAGCTACTGCATAAGCAAACATGTGGCAGTGAAGATCCAAGAGAGCGTGAGAATGGTC
ACATGTCCGGCCTTGAGCTGCGAAGGGGTGCTGGAAGTTGATGATTGTAGGGGAATTGTG
GCGAGAGAAGTGATGGAGAAGTGGGAAGAGGTCAGTTGCGAGTCAATAATAGCAGCATCG
CAGAGGTTTTACTGCCCTTTCAGGGACTGTTCAGCCATGTTGGTGGATGATAATGGAGGG
GAAGTTATAAGGGAGTCTGAGTGTCCGGTATGCCGGAGGCTGTTCTGCGCGGCCTGCTAC
GTGCCGTGGCACTCAGGGGTTGGGTGTGAGGAGTATCAGATGATGAATGAGGATGAGAAA
GGGAGGGAGGATCTGATGCTGAGGGAGCTTGCTCAGGAGAAGAAATGGAGGAGGTGCCCA
CAGTGCAAGTTCTATGTGGAAAAGATCGAAGGTTGTTTACACATTACTTGCAGGTGCACG
TACCAATTTTGCTATGCATGCGGAGCACAGTGGACTCAGCACCATGGGGGCTGCCAAACA
CAATGA

Peptide Sequence

PEP ID

VIT_09s0018g01220.t01
PEP Infomation

pep chromosome:12X:9:18105560:18107342:1 gene:VIT_09s0018g01220 transcript:VIT_09s0018g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7T401]
Sequence

MAQEPTSAHLFVDDFYFSALLDQLEDTEDFVVSDAKYAEELQFQEALMASVEAASNTAVQ
ETAPSIKEIGSSSGSSSAADAAVDMAVVEEGQTSENFCEICAERRGLDEMFRSGKCCHTF
CSYCISKHVAVKIQESVRMVTCPALSCEGVLEVDDCRGIVAREVMEKWEEVSCESIIAAS
QRFYCPFRDCSAMLVDDNGGEVIRESECPVCRRLFCAACYVPWHSGVGCEEYQMMNEDEK
GREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLHITCRCTYQFCYACGAQWTQHHGGCQT
Q

Transcript Sequence

Transcript ID

VIT_09s0018g01220.t01
Transcript Infomation

cdna chromosome:12X:9:18105560:18107342:1 gene:VIT_09s0018g01220 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7T401]
Sequence

ATGGCTCAAGAACCCACCTCTGCTCACCTCTTTGTCGATGATTTCTACTTCTCAGCCCTC
CTGGATCAGCTTGAAGATACTGAAGATTTCGTAGTTTCAGACGCCAAGTATGCGGAAGAG
CTGCAGTTTCAAGAGGCCTTAATGGCATCCGTAGAGGCCGCATCTAATACTGCTGTCCAA
GAAACTGCGCCATCAATAAAAGAAATAGGTTCAAGCTCAGGCTCAAGCAGTGCTGCAGAC
GCTGCTGTTGATATGGCCGTGGTGGAAGAAGGCCAAACATCGGAGAATTTCTGCGAGATT
TGCGCGGAAAGGAGGGGGTTGGATGAGATGTTTAGGAGTGGGAAATGTTGCCATACATTC
TGCAGCTACTGCATAAGCAAACATGTGGCAGTGAAGATCCAAGAGAGCGTGAGAATGGTC
ACATGTCCGGCCTTGAGCTGCGAAGGGGTGCTGGAAGTTGATGATTGTAGGGGAATTGTG
GCGAGAGAAGTGATGGAGAAGTGGGAAGAGGTCAGTTGCGAGTCAATAATAGCAGCATCG
CAGAGGTTTTACTGCCCTTTCAGGGACTGTTCAGCCATGTTGGTGGATGATAATGGAGGG
GAAGTTATAAGGGAGTCTGAGTGTCCGGTATGCCGGAGGCTGTTCTGCGCGGCCTGCTAC
GTGCCGTGGCACTCAGGGGTTGGGTGTGAGGAGTATCAGATGATGAATGAGGATGAGAAA
GGGAGGGAGGATCTGATGCTGAGGGAGCTTGCTCAGGAGAAGAAATGGAGGAGGTGCCCA
CAGTGCAAGTTCTATGTGGAAAAGATCGAAGGTTGTTTACACATTACTTGCAGGTGCACG
TACCAATTTTGCTATGCATGCGGAGCACAGTGGACTCAGCACCATGGGGGCTGCCAAACA
CAATGAAAGAGAGCCTTGGAAGACCAAGAGAGCTTCAA