Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0018g00550.t01
CDS Infomation

cds chromosome:12X:9:16771085:16779600:-1 gene:VIT_09s0018g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACTTTTCACTCTCTCAAAGAAGCTCCCGTTCCCAAGAATCAATCCTCAATTCTTC
CTCACCCTTCTCCTCCGCCCCGTTTCCTCACATTCACTTCAAACTCTCTCTCTCACATTT
CCTCGAACACCTCTAGACAAGCCGCGTTTCTCAGTTCTCCGTCACCTCTCTACCCAAACA
CTCTACGACCCATTTGATTTGATCCGTTGCAAAGATGATGTCTGTGATCCACTCGAATCG
GGTCTTCCCGAATTGCTCAAACGGCTTGAGGGTTTGTCCTCGGAAGCCGAGGTCATGGCT
GTTCTTGATGGGTCCGGAGTGGAGCCGAACCAGGAGTTGGTTTATTGGGCGATTTGGGGG
TTGAGAGAGGATTGGAGATTGGCGTATTGGGTGTTCAATTGGGGTGAAAAATGGGGTTGT
AATAGTGAGAGGACTCGTGGGTTGGTGATATGGATACTGGGGAATTGTAAAAAGTTCGGT
GTTGCTTGGTGTTTGATTCGTGAGTTGCATCGGTCTTCGGTGGATACTCGCCGGGCAATG
CTCATCATGATTGATCGATATACTGCTGCAAATGATCCATGCAAAGCCATTAAAACATTC
CACATTATGGAGAAGTTCAGACTATCTCCAGATCAGGAAGCATTCTACACACTGCTGACT
GCTCTATGTAAACATGGGAATGTTGAAGATGCTGAAGAGCTCATGTTTCAAAATAAGAAG
CTCTTTCCTTTGGAGACTGAGGGCTTCAATATAATTCTTAATGGATGGTCTAATGTATCT
CTTGATATATTTGAAGCCAAGAGAATTTGGAGAGAAATGTCAAAATGCTGTATTGTTCCT
AATGCAACTACTTATACTCTTATGATTTCCTGCTTCTCAAAATTTGGAAATCTTTTTGAC
TCACTGAGATTGTTTGATGATATGAAAAAAAGGGGTTGGATCCCTGGCCTGGAGGTTTAC
AATTCTTTGATATATGTACTAACTCATGAAAATTGCTTGACGGAAGCTCTCAAAATCCTG
GGAAAAATCAAAGAGATGGGCTTGCAACTGGATTCTGCCTCTTACAACTGCATGATACGT
CCTCTATGTAAAGCAAAAAAACTAGAAGAGGCAAGAACTATATTGGCTGCTATGATAGGG
GAAAATCTAGGTCCAACTACTGAAACTTACCATGCATTTCTTGAGGGTGCTAGCTACGAA
GAAACTTTTGAAGTGCTTAAAAATTTGAGAACAGCTGGTTTTGGTCCTAATGGTGATACG
TTTCTTCTTATTCTCGATAACTTATTCAAGTTAGATCAACCTGAGAATGCATTGAAGATT
TGGGTAGAAATGAAACAGTTTGATGTAGTGCCTGGTTCTGAACATTACAAGGTACTGATA
GAAGGCTTGACAAAATTTGGCTGGTTAGTTAAGGCAAGAGAATTGTATGCTGAGATGAGA
TCAAAAGGATTTTTGGATGATCCAAAGCTTAAGAAGCTTTTGAAGGATCCAGTAGAAGGC
GATAGTGGTGAGAGAGAAGGGTGGATGAGGCAAGGCAAGACAGATGTGAGATTACATCAT
GGGAAAAGCAGTATGATGAGATGGAAAAGACTGGGAAATCAATCAAGAAAAAGGCCTCCA
CTTGTAAAATCTAATTTGAAGCTCTGA

Peptide Sequence

PEP ID

VIT_09s0018g00550.t01
PEP Infomation

pep chromosome:12X:9:16771085:16779600:-1 gene:VIT_09s0018g00550 transcript:VIT_09s0018g00550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALFTLSKKLPFPRINPQFFLTLLLRPVSSHSLQTLSLTFPRTPLDKPRFSVLRHLSTQT
LYDPFDLIRCKDDVCDPLESGLPELLKRLEGLSSEAEVMAVLDGSGVEPNQELVYWAIWG
LREDWRLAYWVFNWGEKWGCNSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAM
LIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNKK
LFPLETEGFNIILNGWSNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISCFSKFGNLFD
SLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNCMIR
PLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASYEETFEVLKNLRTAGFGPNGDT
FLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYAEMR
SKGFLDDPKLKKLLKDPVEGDSGEREGWMRQGKTDVRLHHGKSSMMRWKRLGNQSRKRPP
LVKSNLKL

Transcript Sequence

Transcript ID

VIT_09s0018g00550.t01
Transcript Infomation

cdna chromosome:12X:9:16771085:16779600:-1 gene:VIT_09s0018g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACTTTTCACTCTCTCAAAGAAGCTCCCGTTCCCAAGAATCAATCCTCAATTCTTC
CTCACCCTTCTCCTCCGCCCCGTTTCCTCACATTCACTTCAAACTCTCTCTCTCACATTT
CCTCGAACACCTCTAGACAAGCCGCGTTTCTCAGTTCTCCGTCACCTCTCTACCCAAACA
CTCTACGACCCATTTGATTTGATCCGTTGCAAAGATGATGTCTGTGATCCACTCGAATCG
GGTCTTCCCGAATTGCTCAAACGGCTTGAGGGTTTGTCCTCGGAAGCCGAGGTCATGGCT
GTTCTTGATGGGTCCGGAGTGGAGCCGAACCAGGAGTTGGTTTATTGGGCGATTTGGGGG
TTGAGAGAGGATTGGAGATTGGCGTATTGGGTGTTCAATTGGGGTGAAAAATGGGGTTGT
AATAGTGAGAGGACTCGTGGGTTGGTGATATGGATACTGGGGAATTGTAAAAAGTTCGGT
GTTGCTTGGTGTTTGATTCGTGAGTTGCATCGGTCTTCGGTGGATACTCGCCGGGCAATG
CTCATCATGATTGATCGATATACTGCTGCAAATGATCCATGCAAAGCCATTAAAACATTC
CACATTATGGAGAAGTTCAGACTATCTCCAGATCAGGAAGCATTCTACACACTGCTGACT
GCTCTATGTAAACATGGGAATGTTGAAGATGCTGAAGAGCTCATGTTTCAAAATAAGAAG
CTCTTTCCTTTGGAGACTGAGGGCTTCAATATAATTCTTAATGGATGGTCTAATGTATCT
CTTGATATATTTGAAGCCAAGAGAATTTGGAGAGAAATGTCAAAATGCTGTATTGTTCCT
AATGCAACTACTTATACTCTTATGATTTCCTGCTTCTCAAAATTTGGAAATCTTTTTGAC
TCACTGAGATTGTTTGATGATATGAAAAAAAGGGGTTGGATCCCTGGCCTGGAGGTTTAC
AATTCTTTGATATATGTACTAACTCATGAAAATTGCTTGACGGAAGCTCTCAAAATCCTG
GGAAAAATCAAAGAGATGGGCTTGCAACTGGATTCTGCCTCTTACAACTGCATGATACGT
CCTCTATGTAAAGCAAAAAAACTAGAAGAGGCAAGAACTATATTGGCTGCTATGATAGGG
GAAAATCTAGGTCCAACTACTGAAACTTACCATGCATTTCTTGAGGGTGCTAGCTACGAA
GAAACTTTTGAAGTGCTTAAAAATTTGAGAACAGCTGGTTTTGGTCCTAATGGTGATACG
TTTCTTCTTATTCTCGATAACTTATTCAAGTTAGATCAACCTGAGAATGCATTGAAGATT
TGGGTAGAAATGAAACAGTTTGATGTAGTGCCTGGTTCTGAACATTACAAGGTACTGATA
GAAGGCTTGACAAAATTTGGCTGGTTAGTTAAGGCAAGAGAATTGTATGCTGAGATGAGA
TCAAAAGGATTTTTGGATGATCCAAAGCTTAAGAAGCTTTTGAAGGATCCAGTAGAAGGC
GATAGTGGTGAGAGAGAAGGGTGGATGAGGCAAGGCAAGACAGATGTGAGATTACATCAT
GGGAAAAGCAGTATGATGAGATGGAAAAGACTGGGAAATCAATCAAGAAAAAGGCCTCCA
CTTGTAAAATCTAATTTGAAGCTCTGA