Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0018g00400.t01
CDS Infomation

cds chromosome:12X:9:16428267:16471503:1 gene:VIT_09s0018g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCATTTCCATGGCCTTTTCATCGCCTTACACTACCTTCTCTCTCCGCTCTCTCCCT
CAACTCTCTCCTCTCTCTGCATTCTCTTCCCTCTCCACAACCCATTCTCTTCCTCGCTAT
ACTGTCTCTATCTCTCAACCCATCACTACAATTCCAATTCGTTGCAGCAAAAAAGCGGAC
TTTGATCCCAAGGTTGGTGTTTCAGTTTACAAGCCCAAGTCCTACGAAGTACTCGTCACT
GACGCTGCGAATTCTCTTGCTTATGCTCTTGATGATGGGAAAACCCGTTTGGAGATTGAT
TTTCCACCTTTGCCAAGCAACATGTCTTCTTATAAGGGATCTTCAGATGAGTTCATCGAT
GCCAACATTCAGCTTGTCTTGGCTGTTGTGAGGAAGCTCCAAGAAAGGAAGGAAACCAAA
GCTTGCATTGTTTTTCCTGATAAGCCAGAAAAGCGCAGGGCCTCTCAGATTTTCAAAACA
GCACTTGACTCAATTGATGGTATATCCATCGGTTCTCTGGATGATGTTCCCAGTGGTCCT
GTTGCAACATTCTTCAGATCTATCCGGGACACCTTGGATTTTGATTTTGAAGATGACAAT
GAAGGACGTTGGGAGTCCAAGGAAGCACCTTCCCTCTACATATTTATCAACTGTAGCACT
CGAGAACTTGCAGCTATAGAGAAGTTTGTGGAAAAATTTGCTCCATCCACCCCTACACTT
CTTTTTAATTTGGAACTTGACACATTGCGGGCTGACTTAGGTCTCCTGGGATTTCCTACC
AAAGATTTGCATTATCGGTTTCTTTCTCAATTTGTCCCTGTATTCTACATTCGAATAAGA
GAGTATTCTAAGACAGTAGCAGTAGCACCTTACATTGTGAACTACAGTGGGGCACTGTTT
CGTCAATATCCTGGGCCCTGGCAGGTGATGCTTAAACAAGCGGATGGTTCTTATGCTTGT
GTAGCTGAGAGTGCAACCCGCTTCACGCTGGGTGAAACCAAGGAAGAACTGTTGAGAGTC
CTGGGACTACAAGAGGAAGAAGGAAGCTCACTGGAATTTCTTCGAAGGGGCTACAAGTCC
TCCACTTGGTGGGAAGAAGATGTTGAATTGGAATCATCTTCTGCATGGCGGAGCTGA

Peptide Sequence

PEP ID

VIT_09s0018g00400.t01
PEP Infomation

pep chromosome:12X:9:16428267:16471503:1 gene:VIT_09s0018g00400 transcript:VIT_09s0018g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAISMAFSSPYTTFSLRSLPQLSPLSAFSSLSTTHSLPRYTVSISQPITTIPIRCSKKAD
FDPKVGVSVYKPKSYEVLVTDAANSLAYALDDGKTRLEIDFPPLPSNMSSYKGSSDEFID
ANIQLVLAVVRKLQERKETKACIVFPDKPEKRRASQIFKTALDSIDGISIGSLDDVPSGP
VATFFRSIRDTLDFDFEDDNEGRWESKEAPSLYIFINCSTRELAAIEKFVEKFAPSTPTL
LFNLELDTLRADLGLLGFPTKDLHYRFLSQFVPVFYIRIREYSKTVAVAPYIVNYSGALF
RQYPGPWQVMLKQADGSYACVAESATRFTLGETKEELLRVLGLQEEEGSSLEFLRRGYKS
STWWEEDVELESSSAWRS

Transcript Sequence

Transcript ID

VIT_09s0018g00400.t01
Transcript Infomation

cdna chromosome:12X:9:16428267:16471503:1 gene:VIT_09s0018g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCATTTCCATGGCCTTTTCATCGCCTTACACTACCTTCTCTCTCCGCTCTCTCCCT
CAACTCTCTCCTCTCTCTGCATTCTCTTCCCTCTCCACAACCCATTCTCTTCCTCGCTAT
ACTGTCTCTATCTCTCAACCCATCACTACAATTCCAATTCGTTGCAGCAAAAAAGCGGAC
TTTGATCCCAAGGTTGGTGTTTCAGTTTACAAGCCCAAGTCCTACGAAGTACTCGTCACT
GACGCTGCGAATTCTCTTGCTTATGCTCTTGATGATGGGAAAACCCGTTTGGAGATTGAT
TTTCCACCTTTGCCAAGCAACATGTCTTCTTATAAGGGATCTTCAGATGAGTTCATCGAT
GCCAACATTCAGCTTGTCTTGGCTGTTGTGAGGAAGCTCCAAGAAAGGAAGGAAACCAAA
GCTTGCATTGTTTTTCCTGATAAGCCAGAAAAGCGCAGGGCCTCTCAGATTTTCAAAACA
GCACTTGACTCAATTGATGGTATATCCATCGGTTCTCTGGATGATGTTCCCAGTGGTCCT
GTTGCAACATTCTTCAGATCTATCCGGGACACCTTGGATTTTGATTTTGAAGATGACAAT
GAAGGACGTTGGGAGTCCAAGGAAGCACCTTCCCTCTACATATTTATCAACTGTAGCACT
CGAGAACTTGCAGCTATAGAGAAGTTTGTGGAAAAATTTGCTCCATCCACCCCTACACTT
CTTTTTAATTTGGAACTTGACACATTGCGGGCTGACTTAGGTCTCCTGGGATTTCCTACC
AAAGATTTGCATTATCGGTTTCTTTCTCAATTTGTCCCTGTATTCTACATTCGAATAAGA
GAGTATTCTAAGACAGTAGCAGTAGCACCTTACATTGTGAACTACAGTGGGGCACTGTTT
CGTCAATATCCTGGGCCCTGGCAGGTGATGCTTAAACAAGCGGATGGTTCTTATGCTTGT
GTAGCTGAGAGTGCAACCCGCTTCACGCTGGGTGAAACCAAGGAAGAACTGTTGAGAGTC
CTGGGACTACAAGAGGAAGAAGGAAGCTCACTGGAATTTCTTCGAAGGGGCTACAAGTCC
TCCACTTGGTGGGAAGAAGATGTTGAATTGGAATCATCTTCTGCATGGCGGAGCTGAGCA
GCAGCAGCAAAACAGTTAAAGAGAGGGTTAGCAGTTCCAATTGATTTGGACTACCAACTA
GACAACTCTCCTTCACCCCTATCACTGGGGCTATTCAGCCTCAAAGAAAGTAAAGGCTTA
GCATGCAACAAATTTTTTTGGTGCAAGTTCCCACTGTAATGTAATCCTTTTCCCTTACTC
CAATGCAGTTTATTGATTGATGATGTTGTATATCCGCAGCCTTAATGCTGATTGAATGAT
AAGAATCTTCACCTTTTCCCTCAA